RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, human

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC7-222	ENST00000477937	OTX2	P32243	289 aa		13.22	□□□□□ -0.29
HDAC7-222	ENST00000477937	ELK3	P41970	407 aa		13.22	□□□□□ -0.29
HDAC7-222	ENST00000477937	SKIV2L2	P42285	1042 aa	Known RBP	13.22	□□□□□ -0.29
HDAC7-222	ENST00000477937	GCGR	P47871	477 aa		13.22	□□□□□ -0.29
HDAC7-222	ENST00000477937	CARS	P49589	748 aa	Known RBP	13.22	□□□□□ -0.29
HDAC7-222	ENST00000477937	RGS4	P49798	205 aa		13.22	□□□□□ -0.29
HDAC7-222	ENST00000477937	PGD	P52209	483 aa		13.22	□□□□□ -0.29
HDAC7-222	ENST00000477937	VSX2	P58304	361 aa	Predicted RBP	13.22	□□□□□ -0.29
HDAC7-222	ENST00000477937	PRDX1	Q06830	199 aa	Known RBP	13.22	□□□□□ -0.29
HDAC7-222	ENST00000477937	WASHC2D	Q5SRD0	308 aa		13.22	□□□□□ -0.29
HDAC7-222	ENST00000477937	LRRC8E	Q6NSJ5	796 aa		13.22	□□□□□ -0.29
HDAC7-222	ENST00000477937	HIBCH	Q6NVY1	386 aa	Predicted RBP	13.22	□□□□□ -0.29
HDAC7-222	ENST00000477937	MRPL14	Q6P1L8	145 aa	Known RBP	13.22	□□□□□ -0.29
HDAC7-222	ENST00000477937	KIAA0408	Q6ZU52	694 aa		13.22	□□□□□ -0.29
HDAC7-222	ENST00000477937	UBE2R2	Q712K3	238 aa	Predicted RBP	13.22	□□□□□ -0.29
HDAC7-222	ENST00000477937	IGDCC3	Q8IVU1	814 aa		13.22	□□□□□ -0.29
HDAC7-222	ENST00000477937	CPNE9	Q8IYJ1	553 aa		13.22	□□□□□ -0.29
HDAC7-222	ENST00000477937	OR2Y1	Q8NGV0	311 aa		13.22	□□□□□ -0.29
HDAC7-222	ENST00000477937	PTER	Q96BW5	349 aa		13.22	□□□□□ -0.29
HDAC7-222	ENST00000477937	LRRC39	Q96DD0	335 aa		13.22	□□□□□ -0.29
HDAC7-222	ENST00000477937	CERS2	Q96G23	380 aa		13.22	□□□□□ -0.29
HDAC7-222	ENST00000477937	ZNF285	Q96NJ3	590 aa		13.22	□□□□□ -0.29
HDAC7-222	ENST00000477937	ZFYVE21	Q9BQ24	234 aa		13.22	□□□□□ -0.29
HDAC7-222	ENST00000477937	EPN3	Q9H201	632 aa		13.22	□□□□□ -0.29
HDAC7-222	ENST00000477937	CLMP	Q9H6B4	373 aa		13.22	□□□□□ -0.29
HDAC7-222	ENST00000477937	PPAN	Q9NQ55	473 aa	Known RBP	13.22	□□□□□ -0.29
HDAC7-222	ENST00000477937	ENAM	Q9NRM1	1142 aa		13.22	□□□□□ -0.29
HDAC7-222	ENST00000477937	UTP6	Q9NYH9	597 aa	Known RBP	13.22	□□□□□ -0.29
HDAC7-222	ENST00000477937	TAS2R13	Q9NYV9	303 aa		13.22	□□□□□ -0.29
HDAC7-222	ENST00000477937	ANKMY1	Q9P2S6	941 aa		13.22	□□□□□ -0.29
HDAC7-222	ENST00000477937	ZC3H7B	Q9UGR2	993 aa	Known RBP	13.22	□□□□□ -0.29
HDAC7-222	ENST00000477937	SPTA1	P02549	2419 aa		13.22	□□□□□ -0.29
HDAC7-222	ENST00000477937	PEX12	O00623	359 aa		13.21	□□□□□ -0.29
HDAC7-222	ENST00000477937	TTI1	O43156	1089 aa		13.21	□□□□□ -0.29
HDAC7-222	ENST00000477937	CCNDBP1	O95273	360 aa		13.21	□□□□□ -0.29
HDAC7-222	ENST00000477937	ZIC2	O95409	532 aa	Predicted RBP	13.21	□□□□□ -0.29
HDAC7-222	ENST00000477937	IGHE	P01854	428 aa		13.21	□□□□□ -0.29
HDAC7-222	ENST00000477937	AHSG	P02765	367 aa		13.21	□□□□□ -0.29
HDAC7-222	ENST00000477937	ITGA8	P53708	1063 aa		13.21	□□□□□ -0.29
HDAC7-222	ENST00000477937	YBX1	P67809	324 aa	Known RBP	13.21	□□□□□ -0.29
HDAC7-222	ENST00000477937	ATP1A4	Q13733	1029 aa		13.21	□□□□□ -0.29
HDAC7-222	ENST00000477937	HIF1A	Q16665	826 aa		13.21	□□□□□ -0.29
HDAC7-222	ENST00000477937	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	13.21	□□□□□ -0.29
HDAC7-222	ENST00000477937	ICE2	Q659A1	982 aa		13.21	□□□□□ -0.29
HDAC7-222	ENST00000477937	FRMPD2B	Q6IN97	320 aa		13.21	□□□□□ -0.29
HDAC7-222	ENST00000477937	FBXO42	Q6P3S6	717 aa		13.21	□□□□□ -0.29
HDAC7-222	ENST00000477937	RNF44	Q7L0R7	432 aa		13.21	□□□□□ -0.29
HDAC7-222	ENST00000477937	OVCH1	Q7RTY7	1134 aa		13.21	□□□□□ -0.29
HDAC7-222	ENST00000477937	GALNT7	Q86SF2	657 aa		13.21	□□□□□ -0.29
HDAC7-222	ENST00000477937	CNTN4	Q8IWV2	1026 aa		13.21	□□□□□ -0.29
HDAC7-222	ENST00000477937	PALM2	Q8IXS6	379 aa		13.21	□□□□□ -0.29
HDAC7-222	ENST00000477937	PPFIBP2	Q8ND30	876 aa		13.21	□□□□□ -0.29
HDAC7-222	ENST00000477937	MCOLN3	Q8TDD5	553 aa		13.21	□□□□□ -0.29
HDAC7-222	ENST00000477937	ZNF480	Q8WV37	535 aa		13.21	□□□□□ -0.29
HDAC7-222	ENST00000477937	EEF1AKMT1	Q8WVE0	214 aa		13.21	□□□□□ -0.29
HDAC7-222	ENST00000477937	FKBP10	Q96AY3	582 aa		13.21	□□□□□ -0.29
HDAC7-222	ENST00000477937	CFAP36	Q96G28	342 aa		13.21	□□□□□ -0.29
HDAC7-222	ENST00000477937	SNF8	Q96H20	258 aa		13.21	□□□□□ -0.29
HDAC7-222	ENST00000477937	NDN	Q99608	321 aa		13.21	□□□□□ -0.29
HDAC7-222	ENST00000477937	PLCD4	Q9BRC7	762 aa		13.21	□□□□□ -0.29
HDAC7-222	ENST00000477937	TRIM51	Q9BSJ1	452 aa		13.21	□□□□□ -0.29
HDAC7-222	ENST00000477937	MLXIPL	Q9NP71	852 aa		13.21	□□□□□ -0.29
HDAC7-222	ENST00000477937	CHMP2B	Q9UQN3	213 aa		13.21	□□□□□ -0.29
HDAC7-222	ENST00000477937	PCDHGB7	Q9Y5F8	929 aa		13.21	□□□□□ -0.29
HDAC7-222	ENST00000477937	LOC105369274	A0A096LPK9	316 aa		13.2	□□□□□ -0.3
HDAC7-222	ENST00000477937	LOC102723532	A0A0G2JNH3	316 aa		13.2	□□□□□ -0.3
HDAC7-222	ENST00000477937	HYKK	A2RU49	373 aa		13.2	□□□□□ -0.3
HDAC7-222	ENST00000477937	EFCAB8	A8MWE9	144 aa		13.2	□□□□□ -0.3
HDAC7-222	ENST00000477937		E7ENX8	843 aa		13.2	□□□□□ -0.3
HDAC7-222	ENST00000477937	NRP2	O60462	931 aa		13.2	□□□□□ -0.3
HDAC7-222	ENST00000477937	CNOT3	O75175	753 aa	Known RBP	13.2	□□□□□ -0.3
HDAC7-222	ENST00000477937	CEACAM4	O75871	244 aa		13.2	□□□□□ -0.3
HDAC7-222	ENST00000477937	SEC31A	O94979	1220 aa	Known RBP	13.2	□□□□□ -0.3
HDAC7-222	ENST00000477937	ONECUT2	O95948	504 aa		13.2	□□□□□ -0.3
HDAC7-222	ENST00000477937	ALB	P02768	609 aa		13.2	□□□□□ -0.3
HDAC7-222	ENST00000477937	EIF2S1	P05198	315 aa	Known RBP	13.2	□□□□□ -0.3
HDAC7-222	ENST00000477937	GABRB3	P28472	473 aa		13.2	□□□□□ -0.3
HDAC7-222	ENST00000477937	ARL4C	P56559	192 aa		13.2	□□□□□ -0.3
HDAC7-222	ENST00000477937	TAP2	Q03519	686 aa		13.2	□□□□□ -0.3
HDAC7-222	ENST00000477937	THEMIS2	Q5TEJ8	643 aa		13.2	□□□□□ -0.3
HDAC7-222	ENST00000477937	PIWIL4	Q7Z3Z4	852 aa	Known RBP	13.2	□□□□□ -0.3
HDAC7-222	ENST00000477937	SPNS2	Q8IVW8	549 aa		13.2	□□□□□ -0.3
HDAC7-222	ENST00000477937	OR4N4	Q8N0Y3	316 aa		13.2	□□□□□ -0.3
HDAC7-222	ENST00000477937	FER1L6-AS2	Q96M78	137 aa		13.2	□□□□□ -0.3
HDAC7-222	ENST00000477937	TRIM31	Q9BZY9	425 aa		13.2	□□□□□ -0.3
HDAC7-222	ENST00000477937	WDR54	Q9H977	334 aa		13.2	□□□□□ -0.3
HDAC7-222	ENST00000477937	SLC6A20	Q9NP91	592 aa		13.2	□□□□□ -0.3
HDAC7-222	ENST00000477937	SLC22A11	Q9NSA0	550 aa		13.2	□□□□□ -0.3
HDAC7-222	ENST00000477937	ABCF3	Q9NUQ8	709 aa		13.2	□□□□□ -0.3
HDAC7-222	ENST00000477937	TAC3	Q9UHF0	121 aa		13.2	□□□□□ -0.3
HDAC7-222	ENST00000477937	CORO1C	Q9ULV4	474 aa	Predicted RBP	13.2	□□□□□ -0.3
HDAC7-222	ENST00000477937	ZNF451	Q9Y4E5	1061 aa		13.2	□□□□□ -0.3
HDAC7-222	ENST00000477937	TEX264	Q9Y6I9	313 aa		13.2	□□□□□ -0.3
HDAC7-222	ENST00000477937	PCSK5	Q92824	1860 aa		13.2	□□□□□ -0.3
HDAC7-222	ENST00000477937		A6NL46	340 aa		13.19	□□□□□ -0.3
HDAC7-222	ENST00000477937	NDC80	O14777	642 aa		13.19	□□□□□ -0.3
HDAC7-222	ENST00000477937	PDGFA	P04085	211 aa		13.19	□□□□□ -0.3
HDAC7-222	ENST00000477937	C8G	P07360	202 aa		13.19	□□□□□ -0.3
HDAC7-222	ENST00000477937	ITGAX	P20702	1163 aa		13.19	□□□□□ -0.3
HDAC7-222	ENST00000477937	IMPA1	P29218	277 aa		13.19	□□□□□ -0.3

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