RNA–Protein interactions for RNA: ENST00000477890.6

CPSF7-211, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,234 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-211ENST00000477890 ZNF282Q9UDV7 671 aaPredicted RBP11.22□□□□□ -0.61
CPSF7-211ENST00000477890 TSR3Q9UJK0 312 aaKnown RBP11.22□□□□□ -0.61
CPSF7-211ENST00000477890 C3orf18Q9UK00 162 aa11.22□□□□□ -0.61
CPSF7-211ENST00000477890 MRFAP1Q9Y605 127 aa11.22□□□□□ -0.61
CPSF7-211ENST00000477890 CELSR2Q9HCU4 2923 aa11.22□□□□□ -0.61
CPSF7-211ENST00000477890 KPNA5O15131 536 aa11.21□□□□□ -0.61
CPSF7-211ENST00000477890 NDUFS3O75489 264 aa11.21□□□□□ -0.61
CPSF7-211ENST00000477890 ERVK-10P10266 1014 aa11.21□□□□□ -0.61
CPSF7-211ENST00000477890 EIF3BP55884 814 aaKnown RBP11.21□□□□□ -0.61
CPSF7-211ENST00000477890 SESN2P58004 480 aaPredicted RBP11.21□□□□□ -0.61
CPSF7-211ENST00000477890 ARG2P78540 354 aa11.21□□□□□ -0.61
CPSF7-211ENST00000477890 CRADDP78560 199 aa11.21□□□□□ -0.61
CPSF7-211ENST00000477890 ZRSR2Q15696 482 aaKnown RBP11.21□□□□□ -0.61
CPSF7-211ENST00000477890 MUM1Q2TAK8 710 aa11.21□□□□□ -0.61
CPSF7-211ENST00000477890 VWA2Q5GFL6 755 aa11.21□□□□□ -0.61
CPSF7-211ENST00000477890 PRMT9Q6P2P2 845 aa11.21□□□□□ -0.61
CPSF7-211ENST00000477890 RNF44Q7L0R7 432 aa11.21□□□□□ -0.61
CPSF7-211ENST00000477890 SRRM1Q8IYB3 904 aaKnown RBP11.21□□□□□ -0.61
CPSF7-211ENST00000477890 SLC34A3Q8N130 599 aa11.21□□□□□ -0.61
CPSF7-211ENST00000477890 TXLNBQ8N3L3 684 aa11.21□□□□□ -0.61
CPSF7-211ENST00000477890 OTUD6BQ8N6M0 293 aa11.21□□□□□ -0.61
CPSF7-211ENST00000477890 BCORP1Q8N888 145 aa11.21□□□□□ -0.61
CPSF7-211ENST00000477890 CCDC89Q8N998 374 aa11.21□□□□□ -0.61
CPSF7-211ENST00000477890 OR1N1Q8NGS0 311 aa11.21□□□□□ -0.61
CPSF7-211ENST00000477890 OR2A1Q8NGT9 310 aa11.21□□□□□ -0.61
CPSF7-211ENST00000477890 HMGCLL1Q8TB92 370 aa11.21□□□□□ -0.61
CPSF7-211ENST00000477890 MAGEB10Q96LZ2 347 aaPredicted RBP11.21□□□□□ -0.61
CPSF7-211ENST00000477890 BAG1Q99933 345 aaPredicted RBP11.21□□□□□ -0.61
CPSF7-211ENST00000477890 SLX1AQ9BQ83 275 aa11.21□□□□□ -0.61
CPSF7-211ENST00000477890 DESI2Q9BSY9 194 aa11.21□□□□□ -0.61
CPSF7-211ENST00000477890 FRMD8P1Q9BZ68 369 aaPredicted RBP11.21□□□□□ -0.61
CPSF7-211ENST00000477890 OLAHQ9NV23 265 aa11.21□□□□□ -0.61
CPSF7-211ENST00000477890 PAK5Q9P286 719 aa11.21□□□□□ -0.61
CPSF7-211ENST00000477890 KLK4Q9Y5K2 254 aa11.21□□□□□ -0.61
CPSF7-211ENST00000477890 CAPN6Q9Y6Q1 641 aa11.21□□□□□ -0.61
CPSF7-211ENST00000477890 NSG1A0A0A6YYJ2 146 aa11.2□□□□□ -0.62
CPSF7-211ENST00000477890 A0A1W2PPV9 198 aa11.2□□□□□ -0.62
CPSF7-211ENST00000477890 ARHGAP10A1A4S6 786 aa11.2□□□□□ -0.62
CPSF7-211ENST00000477890 DYTNA2CJ06 578 aa11.2□□□□□ -0.62
CPSF7-211ENST00000477890 ZG16O60844 167 aa11.2□□□□□ -0.62
CPSF7-211ENST00000477890 JRKO75564 520 aa11.2□□□□□ -0.62
CPSF7-211ENST00000477890 USP1O94782 785 aa11.2□□□□□ -0.62
CPSF7-211ENST00000477890 ZSCAN5DPP0CG00 497 aa11.2□□□□□ -0.62
CPSF7-211ENST00000477890 FBLP22087 321 aaKnown RBP11.2□□□□□ -0.62
CPSF7-211ENST00000477890 RPS3P23396 243 aaKnown RBP eCLIP11.2□□□□□ -0.62
CPSF7-211ENST00000477890 NMBRP28336 390 aa11.2□□□□□ -0.62
CPSF7-211ENST00000477890 TNFRSF8P28908 595 aa11.2□□□□□ -0.62
CPSF7-211ENST00000477890 CMPK1P30085 196 aa11.2□□□□□ -0.62
CPSF7-211ENST00000477890 CCNFP41002 786 aa11.2□□□□□ -0.62
CPSF7-211ENST00000477890 YBX1P67809 324 aaKnown RBP11.2□□□□□ -0.62
CPSF7-211ENST00000477890 FASTKQ14296 549 aaKnown RBP11.2□□□□□ -0.62
CPSF7-211ENST00000477890 NAA25Q14CX7 972 aa11.2□□□□□ -0.62
CPSF7-211ENST00000477890 ATG9BQ674R7 924 aa11.2□□□□□ -0.62
CPSF7-211ENST00000477890 RPUSD3Q6P087 351 aaKnown RBP11.2□□□□□ -0.62
CPSF7-211ENST00000477890 LAPTM4BQ86VI4 370 aa11.2□□□□□ -0.62
CPSF7-211ENST00000477890 FJX1Q86VR8 437 aa11.2□□□□□ -0.62
CPSF7-211ENST00000477890 LRRC6Q86X45 466 aa11.2□□□□□ -0.62
CPSF7-211ENST00000477890 SLC13A5Q86YT5 568 aaPredicted RBP11.2□□□□□ -0.62
CPSF7-211ENST00000477890 KBTBD2Q8IY47 623 aa11.2□□□□□ -0.62
CPSF7-211ENST00000477890 MPP5Q8N3R9 675 aa11.2□□□□□ -0.62
CPSF7-211ENST00000477890 MAGEC3Q8TD91 643 aa11.2□□□□□ -0.62
CPSF7-211ENST00000477890 MARVELD3Q96A59 401 aa11.2□□□□□ -0.62
CPSF7-211ENST00000477890 CABS1Q96KC9 395 aa11.2□□□□□ -0.62
CPSF7-211ENST00000477890 C10orf90Q96M02 699 aa11.2□□□□□ -0.62
CPSF7-211ENST00000477890 ZFYVE21Q9BQ24 234 aa11.2□□□□□ -0.62
CPSF7-211ENST00000477890 DPH7Q9BTV6 452 aa11.2□□□□□ -0.62
CPSF7-211ENST00000477890 ACAT2Q9BWD1 397 aa11.2□□□□□ -0.62
CPSF7-211ENST00000477890 YIPF2Q9BWQ6 316 aa11.2□□□□□ -0.62
CPSF7-211ENST00000477890 TREX1Q9NSU2 369 aa11.2□□□□□ -0.62
CPSF7-211ENST00000477890 SPATA7Q9P0W8 599 aa11.2□□□□□ -0.62
CPSF7-211ENST00000477890 PTGFRNQ9P2B2 879 aa11.2□□□□□ -0.62
CPSF7-211ENST00000477890 HEATR5BQ9P2D3 2071 aa11.2□□□□□ -0.62
CPSF7-211ENST00000477890 IGLV3-12A0A075B6K2 115 aa11.19□□□□□ -0.62
CPSF7-211ENST00000477890 A0A1B0GUH1 482 aa11.19□□□□□ -0.62
CPSF7-211ENST00000477890 OR2A25A4D2G3 310 aa11.19□□□□□ -0.62
CPSF7-211ENST00000477890 IDSB3KWA1 339 aa11.19□□□□□ -0.62
CPSF7-211ENST00000477890 H0YGG7 62 aa11.19□□□□□ -0.62
CPSF7-211ENST00000477890 FFAR3O14843 346 aa11.19□□□□□ -0.62
CPSF7-211ENST00000477890 GPR42O15529 346 aa11.19□□□□□ -0.62
CPSF7-211ENST00000477890 HNRNPRO43390 633 aaKnown RBP11.19□□□□□ -0.62
CPSF7-211ENST00000477890 UQCRHP07919 91 aa11.19□□□□□ -0.62
CPSF7-211ENST00000477890 STSP08842 583 aa11.19□□□□□ -0.62
CPSF7-211ENST00000477890 PRR35P0CG20 571 aa11.19□□□□□ -0.62
CPSF7-211ENST00000477890 COX6A1P12074 109 aa11.19□□□□□ -0.62
CPSF7-211ENST00000477890 CXCR2P25025 360 aa11.19□□□□□ -0.62
CPSF7-211ENST00000477890 FMO4P31512 558 aa11.19□□□□□ -0.62
CPSF7-211ENST00000477890 RPL22P35268 128 aaKnown RBP11.19□□□□□ -0.62
CPSF7-211ENST00000477890 EMP2P54851 167 aa11.19□□□□□ -0.62
CPSF7-211ENST00000477890 ARF3P61204 181 aaPredicted RBP11.19□□□□□ -0.62
CPSF7-211ENST00000477890 BASP1P80723 227 aaKnown RBP11.19□□□□□ -0.62
CPSF7-211ENST00000477890 EEF1A2Q05639 463 aaKnown RBP11.19□□□□□ -0.62
CPSF7-211ENST00000477890 TSTA3Q13630 321 aaPredicted RBP11.19□□□□□ -0.62
CPSF7-211ENST00000477890 PRTGQ2VWP7 1150 aa11.19□□□□□ -0.62
CPSF7-211ENST00000477890 CTSL3PQ5NE16 218 aa11.19□□□□□ -0.62
CPSF7-211ENST00000477890 FAAH2Q6GMR7 532 aa11.19□□□□□ -0.62
CPSF7-211ENST00000477890 FBXO42Q6P3S6 717 aa11.19□□□□□ -0.62
CPSF7-211ENST00000477890 MYO7BQ6PIF6 2116 aa11.19□□□□□ -0.62
CPSF7-211ENST00000477890 SUSD1Q6UWL2 747 aa11.19□□□□□ -0.62
CPSF7-211ENST00000477890 NDUFAF7Q7L592 441 aa11.19□□□□□ -0.62
CPSF7-211ENST00000477890 TMEM139Q8IV31 216 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms