RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 PPP1R2P1Q96PQ5 205 aa19.24■□□□□ 0.67
PDLIM1-202ENST00000477757 FERMT1Q9BQL6 677 aa19.24■□□□□ 0.67
PDLIM1-202ENST00000477757 TMUB1Q9BVT8 246 aa19.24■□□□□ 0.67
PDLIM1-202ENST00000477757 RAB11FIP5Q9BXF6 653 aa19.24■□□□□ 0.67
PDLIM1-202ENST00000477757 IMPACTQ9P2X3 320 aa19.24■□□□□ 0.67
PDLIM1-202ENST00000477757 TRPC4Q9UBN4 977 aa19.24■□□□□ 0.67
PDLIM1-202ENST00000477757 ZC3H7BQ9UGR2 993 aaKnown RBP19.24■□□□□ 0.67
PDLIM1-202ENST00000477757 LOC105369274A0A096LPK9 316 aa19.23■□□□□ 0.67
PDLIM1-202ENST00000477757 LOC102723532A0A0G2JNH3 316 aa19.23■□□□□ 0.67
PDLIM1-202ENST00000477757 FAM227AF5H4B4 570 aa19.23■□□□□ 0.67
PDLIM1-202ENST00000477757 PRPF4O43172 522 aaKnown RBP eCLIP19.23■□□□□ 0.67
PDLIM1-202ENST00000477757 CSE1LP55060 971 aaKnown RBP19.23■□□□□ 0.67
PDLIM1-202ENST00000477757 SPARCL1Q14515 664 aa19.23■□□□□ 0.67
PDLIM1-202ENST00000477757 IQCB1Q15051 598 aa19.23■□□□□ 0.67
PDLIM1-202ENST00000477757 UNC5DQ6UXZ4 953 aa19.23■□□□□ 0.67
PDLIM1-202ENST00000477757 VRK3Q8IV63 474 aa19.23■□□□□ 0.67
PDLIM1-202ENST00000477757 KLHDC8BQ8IXV7 354 aa19.23■□□□□ 0.67
PDLIM1-202ENST00000477757 KATNAL2Q8IYT4 538 aa19.23■□□□□ 0.67
PDLIM1-202ENST00000477757 OR4N4Q8N0Y3 316 aa19.23■□□□□ 0.67
PDLIM1-202ENST00000477757 MVB12AQ96EY5 273 aa19.23■□□□□ 0.67
PDLIM1-202ENST00000477757 STMN3Q9NZ72 180 aa19.23■□□□□ 0.67
PDLIM1-202ENST00000477757 STOX2Q9P2F5 926 aaPredicted RBP19.23■□□□□ 0.67
PDLIM1-202ENST00000477757 FFAR3O14843 346 aa19.22■□□□□ 0.67
PDLIM1-202ENST00000477757 GPR42O15529 346 aa19.22■□□□□ 0.67
PDLIM1-202ENST00000477757 NRP2O60462 931 aa19.22■□□□□ 0.67
PDLIM1-202ENST00000477757 HEXBP07686 556 aa19.22■□□□□ 0.67
PDLIM1-202ENST00000477757 ERVK-10P10266 1014 aa19.22■□□□□ 0.67
PDLIM1-202ENST00000477757 CD99P14209 185 aa19.22■□□□□ 0.67
PDLIM1-202ENST00000477757 PSMA3P25788 255 aa19.22■□□□□ 0.67
PDLIM1-202ENST00000477757 EMP3P54852 163 aa19.22■□□□□ 0.67
PDLIM1-202ENST00000477757 PRTGQ2VWP7 1150 aa19.22■□□□□ 0.67
PDLIM1-202ENST00000477757 TMEM205Q6UW68 189 aa19.22■□□□□ 0.67
PDLIM1-202ENST00000477757 MMP21Q8N119 569 aa19.22■□□□□ 0.67
PDLIM1-202ENST00000477757 AGAP11Q8TF27 550 aa19.22■□□□□ 0.67
PDLIM1-202ENST00000477757 STYXQ8WUJ0 223 aa19.22■□□□□ 0.67
PDLIM1-202ENST00000477757 LRRC45Q96CN5 670 aa19.22■□□□□ 0.67
PDLIM1-202ENST00000477757 IMMP1LQ96LU5 166 aa19.22■□□□□ 0.67
PDLIM1-202ENST00000477757 DMRTA2Q96SC8 542 aa19.22■□□□□ 0.67
PDLIM1-202ENST00000477757 TMEM121Q9BTD3 319 aa19.22■□□□□ 0.67
PDLIM1-202ENST00000477757 TUBB6Q9BUF5 446 aa19.22■□□□□ 0.67
PDLIM1-202ENST00000477757 TGIF2Q9GZN2 237 aa19.22■□□□□ 0.67
PDLIM1-202ENST00000477757 TSPAN10Q9H1Z9 355 aaPredicted RBP19.22■□□□□ 0.67
PDLIM1-202ENST00000477757 CDC14AQ9UNH5 594 aa19.22■□□□□ 0.67
PDLIM1-202ENST00000477757 A0A0J9YVX5 310 aa19.21■□□□□ 0.67
PDLIM1-202ENST00000477757 FAM221AA4D161 298 aa19.21■□□□□ 0.67
PDLIM1-202ENST00000477757 ASPDHA6ND91 283 aa19.21■□□□□ 0.67
PDLIM1-202ENST00000477757 RCCD1A6NED2 376 aa19.21■□□□□ 0.67
PDLIM1-202ENST00000477757 TTI1O43156 1089 aa19.21■□□□□ 0.67
PDLIM1-202ENST00000477757 STK10O94804 968 aaKnown RBP19.21■□□□□ 0.67
PDLIM1-202ENST00000477757 EIF2S1P05198 315 aaKnown RBP19.21■□□□□ 0.67
PDLIM1-202ENST00000477757 IGFBP2P18065 325 aa19.21■□□□□ 0.67
PDLIM1-202ENST00000477757 MSNP26038 577 aaKnown RBP19.21■□□□□ 0.67
PDLIM1-202ENST00000477757 PSMB5P28074 263 aa19.21■□□□□ 0.67
PDLIM1-202ENST00000477757 CCR7P32248 378 aa19.21■□□□□ 0.67
PDLIM1-202ENST00000477757 FOXN2P32314 431 aa19.21■□□□□ 0.67
PDLIM1-202ENST00000477757 UBASH3AP57075 661 aa19.21■□□□□ 0.67
PDLIM1-202ENST00000477757 ALDH6A1Q02252 535 aaKnown RBP19.21■□□□□ 0.67
PDLIM1-202ENST00000477757 CCDC50Q8IVM0 306 aa19.21■□□□□ 0.67
PDLIM1-202ENST00000477757 CDKL3Q8IVW4 592 aaPredicted RBP19.21■□□□□ 0.67
PDLIM1-202ENST00000477757 AMER2Q8N7J2 671 aa19.21■□□□□ 0.67
PDLIM1-202ENST00000477757 AMER3Q8N944 861 aa19.21■□□□□ 0.67
PDLIM1-202ENST00000477757 MDS2Q8NDY4 140 aa19.21■□□□□ 0.67
PDLIM1-202ENST00000477757 OR2L3Q8NG85 312 aa19.21■□□□□ 0.67
PDLIM1-202ENST00000477757 CA5BP1Q8WTZ4 195 aa19.21■□□□□ 0.67
PDLIM1-202ENST00000477757 SPATA13Q96N96 652 aa19.21■□□□□ 0.67
PDLIM1-202ENST00000477757 FRMD6Q96NE9 622 aa19.21■□□□□ 0.67
PDLIM1-202ENST00000477757 MIPEPQ99797 713 aa19.21■□□□□ 0.67
PDLIM1-202ENST00000477757 MKKSQ9NPJ1 570 aaPredicted RBP19.21■□□□□ 0.67
PDLIM1-202ENST00000477757 SLC39A10Q9ULF5 831 aa19.21■□□□□ 0.67
PDLIM1-202ENST00000477757 OR51F1A6NGY5 319 aa19.2■□□□□ 0.66
PDLIM1-202ENST00000477757 NPIPA5E9PKD4 350 aa19.2■□□□□ 0.66
PDLIM1-202ENST00000477757 E9PLN8 166 aa19.2■□□□□ 0.66
PDLIM1-202ENST00000477757 F8W8V4 182 aa19.2■□□□□ 0.66
PDLIM1-202ENST00000477757 AKR1B10O60218 316 aa19.2■□□□□ 0.66
PDLIM1-202ENST00000477757 OR1I1O60431 355 aa19.2■□□□□ 0.66
PDLIM1-202ENST00000477757 GPC4O75487 556 aa19.2■□□□□ 0.66
PDLIM1-202ENST00000477757 ABOP16442 354 aa19.2■□□□□ 0.66
PDLIM1-202ENST00000477757 SLC26A3P40879 764 aa19.2■□□□□ 0.66
PDLIM1-202ENST00000477757 MARCKSL1P49006 195 aa19.2■□□□□ 0.66
PDLIM1-202ENST00000477757 HSPA14Q0VDF9 509 aa19.2■□□□□ 0.66
PDLIM1-202ENST00000477757 POU6F1Q14863 301 aa19.2■□□□□ 0.66
PDLIM1-202ENST00000477757 TCEAL1Q15170 157 aa19.2■□□□□ 0.66
PDLIM1-202ENST00000477757 SIAH3Q8IW03 269 aa19.2■□□□□ 0.66
PDLIM1-202ENST00000477757 RCOR2Q8IZ40 523 aa19.2■□□□□ 0.66
PDLIM1-202ENST00000477757 BEST3Q8N1M1 668 aa19.2■□□□□ 0.66
PDLIM1-202ENST00000477757 CFAP61Q8NHU2 1237 aa19.2■□□□□ 0.66
PDLIM1-202ENST00000477757 ASZ1Q8WWH4 475 aa19.2■□□□□ 0.66
PDLIM1-202ENST00000477757 CABS1Q96KC9 395 aa19.2■□□□□ 0.66
PDLIM1-202ENST00000477757 ZFYVE21Q9BQ24 234 aa19.2■□□□□ 0.66
PDLIM1-202ENST00000477757 VKORC1Q9BQB6 163 aa19.2■□□□□ 0.66
PDLIM1-202ENST00000477757 TNFRSF10DQ9UBN6 386 aa19.2■□□□□ 0.66
PDLIM1-202ENST00000477757 NPIPA1Q9UND3 350 aa19.2■□□□□ 0.66
PDLIM1-202ENST00000477757 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.2■□□□□ 0.66
PDLIM1-202ENST00000477757 ACANP16112 2415 aa19.2■□□□□ 0.66
PDLIM1-202ENST00000477757 OR2A25A4D2G3 310 aa19.19■□□□□ 0.66
PDLIM1-202ENST00000477757 MROH6A6NGR9 719 aa19.19■□□□□ 0.66
PDLIM1-202ENST00000477757 ADAM10O14672 748 aa19.19■□□□□ 0.66
PDLIM1-202ENST00000477757 TPH1P17752 444 aa19.19■□□□□ 0.66
PDLIM1-202ENST00000477757 EFNA3P52797 238 aa19.19■□□□□ 0.66
PDLIM1-202ENST00000477757 KCTD11Q693B1 232 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms