RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 MND1Q9BWT6 205 aa12.35□□□□□ -0.43
RTFDC1-207ENST00000477573 DUSP16Q9BY84 665 aa12.35□□□□□ -0.43
RTFDC1-207ENST00000477573 PRRG3Q9BZD7 231 aa12.35□□□□□ -0.43
RTFDC1-207ENST00000477573 ILKAPQ9H0C8 392 aaPredicted RBP12.35□□□□□ -0.43
RTFDC1-207ENST00000477573 GAREM1Q9H706 876 aa12.35□□□□□ -0.43
RTFDC1-207ENST00000477573 RNF121Q9H920 327 aa12.35□□□□□ -0.43
RTFDC1-207ENST00000477573 UFSP2Q9NUQ7 469 aa12.35□□□□□ -0.43
RTFDC1-207ENST00000477573 TMEM39AQ9NV64 488 aa12.35□□□□□ -0.43
RTFDC1-207ENST00000477573 BABAM2Q9NXR7 383 aa12.35□□□□□ -0.43
RTFDC1-207ENST00000477573 KIF25Q9UIL4 384 aa12.35□□□□□ -0.43
RTFDC1-207ENST00000477573 KCNMB2Q9Y691 235 aa12.35□□□□□ -0.43
RTFDC1-207ENST00000477573 TP53BP1Q12888 1972 aaPredicted RBP12.34□□□□□ -0.43
RTFDC1-207ENST00000477573 SLC1A7O00341 560 aa12.34□□□□□ -0.43
RTFDC1-207ENST00000477573 SLC30A4O14863 429 aa12.34□□□□□ -0.43
RTFDC1-207ENST00000477573 TMEM63AO94886 807 aa12.34□□□□□ -0.43
RTFDC1-207ENST00000477573 CCNB2O95067 398 aa12.34□□□□□ -0.43
RTFDC1-207ENST00000477573 IFNB1P01574 187 aa12.34□□□□□ -0.43
RTFDC1-207ENST00000477573 PRKAR1AP10644 381 aa12.34□□□□□ -0.43
RTFDC1-207ENST00000477573 ITGAMP11215 1152 aa12.34□□□□□ -0.43
RTFDC1-207ENST00000477573 JUPP14923 745 aa12.34□□□□□ -0.43
RTFDC1-207ENST00000477573 TCF3P15923 654 aa12.34□□□□□ -0.43
RTFDC1-207ENST00000477573 IL7RP16871 459 aa12.34□□□□□ -0.43
RTFDC1-207ENST00000477573 CDH6P55285 790 aa12.34□□□□□ -0.43
RTFDC1-207ENST00000477573 FOXK2Q01167 660 aa12.34□□□□□ -0.43
RTFDC1-207ENST00000477573 FPGSQ05932 587 aa12.34□□□□□ -0.43
RTFDC1-207ENST00000477573 ASAH1Q13510 395 aa12.34□□□□□ -0.43
RTFDC1-207ENST00000477573 PABPC1L2AQ5JQF8 200 aa12.34□□□□□ -0.43
RTFDC1-207ENST00000477573 WSCD1Q658N2 575 aa12.34□□□□□ -0.43
RTFDC1-207ENST00000477573 CES5AQ6NT32 575 aa12.34□□□□□ -0.43
RTFDC1-207ENST00000477573 SLC27A4Q6P1M0 643 aa12.34□□□□□ -0.43
RTFDC1-207ENST00000477573 PIGZQ86VD9 579 aa12.34□□□□□ -0.43
RTFDC1-207ENST00000477573 IGDCC3Q8IVU1 814 aa12.34□□□□□ -0.43
RTFDC1-207ENST00000477573 KBTBD8Q8NFY9 601 aa12.34□□□□□ -0.43
RTFDC1-207ENST00000477573 SLC35B2Q8TB61 432 aa12.34□□□□□ -0.43
RTFDC1-207ENST00000477573 PIWIL1Q96J94 861 aaKnown RBP12.34□□□□□ -0.43
RTFDC1-207ENST00000477573 FEM1AQ9BSK4 669 aa12.34□□□□□ -0.43
RTFDC1-207ENST00000477573 MUC13Q9H3R2 512 aa12.34□□□□□ -0.43
RTFDC1-207ENST00000477573 SOX17Q9H6I2 414 aaPredicted RBP12.34□□□□□ -0.43
RTFDC1-207ENST00000477573 CACNA2D2Q9NY47 1150 aa12.34□□□□□ -0.43
RTFDC1-207ENST00000477573 USE1Q9NZ43 259 aa12.34□□□□□ -0.43
RTFDC1-207ENST00000477573 ADAM30Q9UKF2 790 aa12.34□□□□□ -0.43
RTFDC1-207ENST00000477573 SLC6A14Q9UN76 642 aa12.34□□□□□ -0.43
RTFDC1-207ENST00000477573 ABCG2Q9UNQ0 655 aa12.34□□□□□ -0.43
RTFDC1-207ENST00000477573 CENPFP49454 3210 aa12.33□□□□□ -0.43
RTFDC1-207ENST00000477573 MEIS3P2A8K0S8 358 aa12.33□□□□□ -0.44
RTFDC1-207ENST00000477573 MPTX1A8MV57 137 aa12.33□□□□□ -0.44
RTFDC1-207ENST00000477573 APOC4-APOC2K7ER74 178 aa12.33□□□□□ -0.44
RTFDC1-207ENST00000477573 HCRTO43612 131 aa12.33□□□□□ -0.44
RTFDC1-207ENST00000477573 LDLRP01130 860 aa12.33□□□□□ -0.44
RTFDC1-207ENST00000477573 APOC2P02655 101 aa12.33□□□□□ -0.44
RTFDC1-207ENST00000477573 HEXBP07686 556 aa12.33□□□□□ -0.44
RTFDC1-207ENST00000477573 THRBP10828 461 aa12.33□□□□□ -0.44
RTFDC1-207ENST00000477573 UMPSP11172 480 aa12.33□□□□□ -0.44
RTFDC1-207ENST00000477573 LCP1P13796 627 aa12.33□□□□□ -0.44
RTFDC1-207ENST00000477573 P2RY4P51582 365 aa12.33□□□□□ -0.44
RTFDC1-207ENST00000477573 DYNLT1P63172 113 aa12.33□□□□□ -0.44
RTFDC1-207ENST00000477573 GABREP78334 506 aa12.33□□□□□ -0.44
RTFDC1-207ENST00000477573 POU4F3Q15319 338 aa12.33□□□□□ -0.44
RTFDC1-207ENST00000477573 ETFDHQ16134 617 aa12.33□□□□□ -0.44
RTFDC1-207ENST00000477573 SWI5Q1ZZU3 235 aa12.33□□□□□ -0.44
RTFDC1-207ENST00000477573 PITRM1Q5JRX3 1037 aa12.33□□□□□ -0.44
RTFDC1-207ENST00000477573 SEL1L3Q68CR1 1132 aa12.33□□□□□ -0.44
RTFDC1-207ENST00000477573 C8orf82Q6P1X6 216 aaPredicted RBP12.33□□□□□ -0.44
RTFDC1-207ENST00000477573 SCYL2Q6P3W7 929 aa12.33□□□□□ -0.44
RTFDC1-207ENST00000477573 TRILQ7L0X0 811 aa12.33□□□□□ -0.44
RTFDC1-207ENST00000477573 ZZZ3Q8IYH5 903 aa12.33□□□□□ -0.44
RTFDC1-207ENST00000477573 CYP4Z2PQ8N1L4 340 aa12.33□□□□□ -0.44
RTFDC1-207ENST00000477573 PCDH20Q8N6Y1 951 aaKnown RBP12.33□□□□□ -0.44
RTFDC1-207ENST00000477573 FBXO30Q8TB52 745 aa12.33□□□□□ -0.44
RTFDC1-207ENST00000477573 LINC00052Q96N35 136 aa12.33□□□□□ -0.44
RTFDC1-207ENST00000477573 ADAM2Q99965 735 aa12.33□□□□□ -0.44
RTFDC1-207ENST00000477573 MED10Q9BTT4 135 aa12.33□□□□□ -0.44
RTFDC1-207ENST00000477573 PAPOLGQ9BWT3 736 aaKnown RBP12.33□□□□□ -0.44
RTFDC1-207ENST00000477573 PPIL3Q9H2H8 161 aaKnown RBP12.33□□□□□ -0.44
RTFDC1-207ENST00000477573 TTYH1Q9H313 450 aaPredicted RBP12.33□□□□□ -0.44
RTFDC1-207ENST00000477573 SPATA6Q9NWH7 488 aaPredicted RBP12.33□□□□□ -0.44
RTFDC1-207ENST00000477573 MCUBQ9NWR8 336 aa12.33□□□□□ -0.44
RTFDC1-207ENST00000477573 CLEC4AQ9UMR7 237 aa12.33□□□□□ -0.44
RTFDC1-207ENST00000477573 PTCH2Q9Y6C5 1203 aa12.33□□□□□ -0.44
RTFDC1-207ENST00000477573 THSD7BQ9C0I4 1608 aa12.33□□□□□ -0.44
RTFDC1-207ENST00000477573 PIPSLA2A3N6 862 aa12.33□□□□□ -0.44
RTFDC1-207ENST00000477573 PCDH17O14917 1159 aa12.33□□□□□ -0.44
RTFDC1-207ENST00000477573 MDM4O15151 490 aa12.33□□□□□ -0.44
RTFDC1-207ENST00000477573 HOXA2O43364 376 aa12.33□□□□□ -0.44
RTFDC1-207ENST00000477573 AKAP8O43823 692 aaKnown RBP12.33□□□□□ -0.44
RTFDC1-207ENST00000477573 SRP72O76094 671 aaKnown RBP12.33□□□□□ -0.44
RTFDC1-207ENST00000477573 PAPSS2O95340 614 aaPredicted RBP12.33□□□□□ -0.44
RTFDC1-207ENST00000477573 ODC1P11926 461 aa12.33□□□□□ -0.44
RTFDC1-207ENST00000477573 PCSK1P29120 753 aa12.33□□□□□ -0.44
RTFDC1-207ENST00000477573 ADRA1BP35368 520 aa12.33□□□□□ -0.44
RTFDC1-207ENST00000477573 BMPR2Q13873 1038 aa12.33□□□□□ -0.44
RTFDC1-207ENST00000477573 KCNAB1Q14722 419 aa12.33□□□□□ -0.44
RTFDC1-207ENST00000477573 NCF4Q15080 339 aa12.33□□□□□ -0.44
RTFDC1-207ENST00000477573 IMPG1Q17R60 797 aa12.33□□□□□ -0.44
RTFDC1-207ENST00000477573 ELP2Q6IA86 826 aa12.33□□□□□ -0.44
RTFDC1-207ENST00000477573 PDE12Q6L8Q7 609 aaKnown RBP12.33□□□□□ -0.44
RTFDC1-207ENST00000477573 STRA8Q7Z7C7 330 aa12.33□□□□□ -0.44
RTFDC1-207ENST00000477573 TMC8Q8IU68 726 aa12.33□□□□□ -0.44
RTFDC1-207ENST00000477573 OR8H2Q8N162 312 aa12.33□□□□□ -0.44
RTFDC1-207ENST00000477573 UBE2J2Q8N2K1 259 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms