RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 GALNT13Q8IUC8 556 aa14.24□□□□□ -0.13
HDAC6-220ENST00000477528 EPHX4Q8IUS5 362 aa14.24□□□□□ -0.13
HDAC6-220ENST00000477528 OXR1Q8N573 874 aa14.24□□□□□ -0.13
HDAC6-220ENST00000477528 MCFD2Q8NI22 146 aa14.24□□□□□ -0.13
HDAC6-220ENST00000477528 FIBINQ8TAL6 211 aa14.24□□□□□ -0.13
HDAC6-220ENST00000477528 OSBPL10Q9BXB5 764 aa14.24□□□□□ -0.13
HDAC6-220ENST00000477528 A0A096LPI6 279 aa14.24□□□□□ -0.13
HDAC6-220ENST00000477528 ZNF99A8MXY4 864 aaPredicted RBP14.24□□□□□ -0.13
HDAC6-220ENST00000477528 H0YAE9 185 aa14.24□□□□□ -0.13
HDAC6-220ENST00000477528 CYP7B1O75881 506 aa14.24□□□□□ -0.13
HDAC6-220ENST00000477528 IMPDH2P12268 514 aa14.24□□□□□ -0.13
HDAC6-220ENST00000477528 BMP2P12643 396 aa14.24□□□□□ -0.13
HDAC6-220ENST00000477528 LIPJQ5W064 366 aa14.24□□□□□ -0.13
HDAC6-220ENST00000477528 NADSYN1Q6IA69 706 aa14.24□□□□□ -0.13
HDAC6-220ENST00000477528 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.24□□□□□ -0.137e-6■□□□□ 8.4
HDAC6-220ENST00000477528 SLC30A8Q8IWU4 369 aa14.24□□□□□ -0.13
HDAC6-220ENST00000477528 PIH1D2Q8WWB5 315 aa14.24□□□□□ -0.13
HDAC6-220ENST00000477528 SCAMP4Q969E2 229 aa14.24□□□□□ -0.13
HDAC6-220ENST00000477528 TPT1P8Q9HAU6 139 aa14.24□□□□□ -0.13
HDAC6-220ENST00000477528 ARMC1Q9NVT9 282 aa14.24□□□□□ -0.13
HDAC6-220ENST00000477528 DGKBQ9Y6T7 804 aa14.24□□□□□ -0.13
HDAC6-220ENST00000477528 KIF13BQ9NQT8 1826 aa14.24□□□□□ -0.13
HDAC6-220ENST00000477528 MPZL2O60487 215 aa14.24□□□□□ -0.13
HDAC6-220ENST00000477528 PRMT3O60678 531 aa14.24□□□□□ -0.13
HDAC6-220ENST00000477528 TGFB1P01137 390 aa14.24□□□□□ -0.13
HDAC6-220ENST00000477528 PDYNP01213 254 aa14.24□□□□□ -0.13
HDAC6-220ENST00000477528 ANXA8P13928 327 aa14.24□□□□□ -0.13
HDAC6-220ENST00000477528 PSMD7P51665 324 aa14.24□□□□□ -0.13
HDAC6-220ENST00000477528 FBXW4P57775 412 aa14.24□□□□□ -0.13
HDAC6-220ENST00000477528 TCEA2Q15560 299 aa14.24□□□□□ -0.13
HDAC6-220ENST00000477528 PRAMEF14Q5SWL7 426 aa14.24□□□□□ -0.13
HDAC6-220ENST00000477528 PDZK1Q5T2W1 519 aa14.24□□□□□ -0.13
HDAC6-220ENST00000477528 PRAMEF13Q5VWM6 474 aa14.24□□□□□ -0.13
HDAC6-220ENST00000477528 TAS1R1Q7RTX1 841 aa14.24□□□□□ -0.13
HDAC6-220ENST00000477528 BOCQ9BWV1 1114 aa14.24□□□□□ -0.13
HDAC6-220ENST00000477528 MSRAQ9UJ68 235 aa14.24□□□□□ -0.13
HDAC6-220ENST00000477528 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.24□□□□□ -0.13
HDAC6-220ENST00000477528 SAP18O00422 153 aaKnown RBP14.23□□□□□ -0.13
HDAC6-220ENST00000477528 C8BP07358 591 aa14.23□□□□□ -0.13
HDAC6-220ENST00000477528 CCNYL3P0C7X3 344 aa14.23□□□□□ -0.13
HDAC6-220ENST00000477528 ATF6P18850 670 aa14.23□□□□□ -0.13
HDAC6-220ENST00000477528 DCST1Q5T197 706 aa14.23□□□□□ -0.13
HDAC6-220ENST00000477528 MFSD4BQ5TF39 518 aa14.23□□□□□ -0.13
HDAC6-220ENST00000477528 NOXRED1Q6NXP6 359 aa14.23□□□□□ -0.13
HDAC6-220ENST00000477528 PGBD5Q8N414 524 aa14.23□□□□□ -0.13
HDAC6-220ENST00000477528 C19orf18Q8NEA5 215 aa14.23□□□□□ -0.13
HDAC6-220ENST00000477528 TEX47Q8TBZ9 253 aa14.23□□□□□ -0.13
HDAC6-220ENST00000477528 MYRFLQ96LU7 910 aa14.23□□□□□ -0.13
HDAC6-220ENST00000477528 SPHK2Q9NRA0 654 aa14.23□□□□□ -0.13
HDAC6-220ENST00000477528 TMEM30AQ9NV96 361 aa14.23□□□□□ -0.13
HDAC6-220ENST00000477528 EDDM13A0A1B0GTR0 161 aa14.23□□□□□ -0.13
HDAC6-220ENST00000477528 LOC100130705A0A1B0GUX0 176 aa14.23□□□□□ -0.13
HDAC6-220ENST00000477528 PDPK1O15530 556 aa14.23□□□□□ -0.13
HDAC6-220ENST00000477528 LEFTY1O75610 366 aa14.23□□□□□ -0.13
HDAC6-220ENST00000477528 TALDO1P37837 337 aa14.23□□□□□ -0.13
HDAC6-220ENST00000477528 RGRP47804 291 aa14.23□□□□□ -0.13
HDAC6-220ENST00000477528 HTR6P50406 440 aa14.23□□□□□ -0.13
HDAC6-220ENST00000477528 OR4D2P58180 307 aa14.23□□□□□ -0.13
HDAC6-220ENST00000477528 PPP1R8Q12972 351 aaKnown RBP14.23□□□□□ -0.13
HDAC6-220ENST00000477528 SCARB2Q14108 478 aa14.23□□□□□ -0.13
HDAC6-220ENST00000477528 DGKKQ5KSL6 1271 aa14.23□□□□□ -0.13
HDAC6-220ENST00000477528 CDC73Q6P1J9 531 aa14.23□□□□□ -0.13
HDAC6-220ENST00000477528 MBOAT1Q6ZNC8 495 aa14.23□□□□□ -0.13
HDAC6-220ENST00000477528 KRTCAP2Q8N6L1 136 aa14.23□□□□□ -0.13
HDAC6-220ENST00000477528 PSMA8Q8TAA3 256 aa14.23□□□□□ -0.13
HDAC6-220ENST00000477528 SLC35A5Q9BS91 424 aa14.23□□□□□ -0.13
HDAC6-220ENST00000477528 EXD2Q9NVH0 621 aa14.23□□□□□ -0.13
HDAC6-220ENST00000477528 CMTM6Q9NX76 183 aa14.23□□□□□ -0.13
HDAC6-220ENST00000477528 IGLV3-10A0A075B6K4 115 aa14.23□□□□□ -0.13
HDAC6-220ENST00000477528 EIF3FO00303 357 aaPredicted RBP14.23□□□□□ -0.13
HDAC6-220ENST00000477528 POP7O75817 140 aaKnown RBP14.23□□□□□ -0.13
HDAC6-220ENST00000477528 EIF2S1P05198 315 aaKnown RBP14.23□□□□□ -0.13
HDAC6-220ENST00000477528 RB1P06400 928 aa14.23□□□□□ -0.13
HDAC6-220ENST00000477528 FPR1P21462 350 aa14.23□□□□□ -0.13
HDAC6-220ENST00000477528 HSPB3Q12988 150 aa14.23□□□□□ -0.13
HDAC6-220ENST00000477528 MANEALQ5VSG8 457 aa14.23□□□□□ -0.13
HDAC6-220ENST00000477528 TRAM1L1Q8N609 369 aa14.23□□□□□ -0.13
HDAC6-220ENST00000477528 IPCEF1Q8WWN9 437 aaPredicted RBP14.23□□□□□ -0.13
HDAC6-220ENST00000477528 PHF21AQ96BD5 680 aa14.23□□□□□ -0.13
HDAC6-220ENST00000477528 MTERF3Q96E29 417 aa14.23□□□□□ -0.13
HDAC6-220ENST00000477528 SCRN2Q96FV2 425 aa14.23□□□□□ -0.13
HDAC6-220ENST00000477528 TTLL2Q9BWV7 592 aa14.23□□□□□ -0.13
HDAC6-220ENST00000477528 TSC22D4Q9Y3Q8 395 aa14.23□□□□□ -0.13
HDAC6-220ENST00000477528 CBARPQ8N350 705 aaPredicted RBP14.22□□□□□ -0.13
HDAC6-220ENST00000477528 NATD1Q8N6N6 113 aa14.22□□□□□ -0.13
HDAC6-220ENST00000477528 RERGQ96A58 199 aaPredicted RBP14.22□□□□□ -0.13
HDAC6-220ENST00000477528 ZBED6CLQ96FA7 236 aaPredicted RBP14.22□□□□□ -0.13
HDAC6-220ENST00000477528 LRIG1Q96JA1 1093 aa14.22□□□□□ -0.13
HDAC6-220ENST00000477528 TOR3AQ9H497 397 aa14.22□□□□□ -0.13
HDAC6-220ENST00000477528 IL26Q9NPH9 171 aa14.22□□□□□ -0.13
HDAC6-220ENST00000477528 EHD3Q9NZN3 535 aa14.22□□□□□ -0.13
HDAC6-220ENST00000477528 BRWD3Q6RI45 1802 aa14.22□□□□□ -0.13
HDAC6-220ENST00000477528 PDE4DIPQ5VU43 2346 aa14.22□□□□□ -0.13
HDAC6-220ENST00000477528 H3BNH8 94 aa14.22□□□□□ -0.13
HDAC6-220ENST00000477528 NR4A1P22736 598 aa14.22□□□□□ -0.13
HDAC6-220ENST00000477528 HOXD9P28356 352 aaPredicted RBP14.22□□□□□ -0.13
HDAC6-220ENST00000477528 CD70P32970 193 aa14.22□□□□□ -0.13
HDAC6-220ENST00000477528 PREPP48147 710 aa14.22□□□□□ -0.13
HDAC6-220ENST00000477528 EIF2B2P49770 351 aaKnown RBP14.22□□□□□ -0.13
HDAC6-220ENST00000477528 TAS2R41P59536 307 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms