RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 CLHC1Q8NHS4 586 aa2.8□□□□□ -1.96
HMGN4-202ENST00000477243 ACMSDQ8TDX5 336 aa2.8□□□□□ -1.96
HMGN4-202ENST00000477243 DQX1Q8TE96 717 aaKnown RBP2.8□□□□□ -1.96
HMGN4-202ENST00000477243 LPIN2Q92539 896 aa2.8□□□□□ -1.96
HMGN4-202ENST00000477243 ATOH1Q92858 354 aaPredicted RBP2.8□□□□□ -1.96
HMGN4-202ENST00000477243 SLC25A28Q96A46 364 aa2.8□□□□□ -1.96
HMGN4-202ENST00000477243 AZIN2Q96A70 460 aa2.8□□□□□ -1.96
HMGN4-202ENST00000477243 MCUR1Q96AQ8 359 aa2.8□□□□□ -1.96
HMGN4-202ENST00000477243 ISG20Q96AZ6 181 aaKnown RBP2.8□□□□□ -1.96
HMGN4-202ENST00000477243 LRRC45Q96CN5 670 aa2.8□□□□□ -1.96
HMGN4-202ENST00000477243 RBMXL1Q96E39 390 aaKnown RBP2.8□□□□□ -1.96
HMGN4-202ENST00000477243 HMCESQ96FZ2 354 aa2.8□□□□□ -1.96
HMGN4-202ENST00000477243 MARS2Q96GW9 593 aaKnown RBP2.8□□□□□ -1.96
HMGN4-202ENST00000477243 ZBED3Q96IU2 234 aaPredicted RBP2.8□□□□□ -1.96
HMGN4-202ENST00000477243 ZSWIM3Q96MP5 696 aa2.8□□□□□ -1.96
HMGN4-202ENST00000477243 ZNF48Q96MX3 618 aaPredicted RBP2.8□□□□□ -1.96
HMGN4-202ENST00000477243 MUS81Q96NY9 551 aa2.8□□□□□ -1.96
HMGN4-202ENST00000477243 DCLRE1CQ96SD1 692 aaKnown RBP2.8□□□□□ -1.96
HMGN4-202ENST00000477243 SIN3AQ96ST3 1273 aa2.8□□□□□ -1.96
HMGN4-202ENST00000477243 CHP1Q99653 195 aa2.8□□□□□ -1.96
HMGN4-202ENST00000477243 SH3GL1Q99961 368 aa2.8□□□□□ -1.96
HMGN4-202ENST00000477243 C17orf62Q9BQA9 187 aa2.8□□□□□ -1.96
HMGN4-202ENST00000477243 C11orf70Q9BRQ4 267 aa2.8□□□□□ -1.96
HMGN4-202ENST00000477243 ATG101Q9BSB4 218 aa2.8□□□□□ -1.96
HMGN4-202ENST00000477243 IFT27Q9BW83 186 aa2.8□□□□□ -1.96
HMGN4-202ENST00000477243 SCNM1Q9BWG6 230 aa2.8□□□□□ -1.96
HMGN4-202ENST00000477243 C1QTNF5Q9BXJ0 243 aa2.8□□□□□ -1.96
HMGN4-202ENST00000477243 IDI2Q9BXS1 227 aa2.8□□□□□ -1.96
HMGN4-202ENST00000477243 OSBPL1AQ9BXW6 950 aa2.8□□□□□ -1.96
HMGN4-202ENST00000477243 RNF26Q9BY78 433 aaPredicted RBP2.8□□□□□ -1.96
HMGN4-202ENST00000477243 GLT8D2Q9H1C3 349 aa2.8□□□□□ -1.96
HMGN4-202ENST00000477243 TRPV6Q9H1D0 765 aa2.8□□□□□ -1.96
HMGN4-202ENST00000477243 SMOC2Q9H3U7 446 aa2.8□□□□□ -1.96
HMGN4-202ENST00000477243 TDRD3Q9H7E2 651 aaKnown RBP2.8□□□□□ -1.96
HMGN4-202ENST00000477243 CATSPERBQ9H7T0 1116 aa2.8□□□□□ -1.96
HMGN4-202ENST00000477243 METTL7AQ9H8H3 244 aa2.8□□□□□ -1.96
HMGN4-202ENST00000477243 WDR76Q9H967 626 aa2.8□□□□□ -1.96
HMGN4-202ENST00000477243 UPF2Q9HAU5 1272 aaKnown RBP2.8□□□□□ -1.96
HMGN4-202ENST00000477243 TMEM248Q9NWD8 314 aa2.8□□□□□ -1.96
HMGN4-202ENST00000477243 ASNSD1Q9NWL6 643 aa2.8□□□□□ -1.96
HMGN4-202ENST00000477243 DPP3Q9NY33 737 aa2.8□□□□□ -1.96
HMGN4-202ENST00000477243 GRHL1Q9NZI5 618 aa2.8□□□□□ -1.96
HMGN4-202ENST00000477243 NOP53Q9NZM5 478 aaKnown RBP2.8□□□□□ -1.96
HMGN4-202ENST00000477243 SPATA7Q9P0W8 599 aa2.8□□□□□ -1.96
HMGN4-202ENST00000477243 STOML1Q9UBI4 398 aa2.8□□□□□ -1.96
HMGN4-202ENST00000477243 UPB1Q9UBR1 384 aa2.8□□□□□ -1.96
HMGN4-202ENST00000477243 STK39Q9UEW8 545 aa2.8□□□□□ -1.96
HMGN4-202ENST00000477243 MTRF1LQ9UGC7 380 aaKnown RBP2.8□□□□□ -1.96
HMGN4-202ENST00000477243 CD300AQ9UGN4 299 aa2.8□□□□□ -1.96
HMGN4-202ENST00000477243 GPR160Q9UJ42 338 aa2.8□□□□□ -1.96
HMGN4-202ENST00000477243 CCNL1Q9UK58 526 aaPredicted RBP2.8□□□□□ -1.96
HMGN4-202ENST00000477243 CROTQ9UKG9 612 aa2.8□□□□□ -1.96
HMGN4-202ENST00000477243 GPR132Q9UNW8 380 aa2.8□□□□□ -1.96
HMGN4-202ENST00000477243 SLC5A6Q9Y289 635 aa2.8□□□□□ -1.96
HMGN4-202ENST00000477243 DTX4Q9Y2E6 619 aa2.8□□□□□ -1.96
HMGN4-202ENST00000477243 SLC9A8Q9Y2E8 581 aa2.8□□□□□ -1.96
HMGN4-202ENST00000477243 ZNF510Q9Y2H8 683 aa2.8□□□□□ -1.96
HMGN4-202ENST00000477243 CEPT1Q9Y6K0 416 aa2.8□□□□□ -1.96
HMGN4-202ENST00000477243 ITPR1Q14643 2758 aa2.8□□□□□ -1.96
HMGN4-202ENST00000477243 PLXNA3P51805 1871 aa2.79□□□□□ -1.96
HMGN4-202ENST00000477243 PDZD2O15018 2839 aa2.79□□□□□ -1.96
HMGN4-202ENST00000477243 HFM1A2PYH4 1435 aa2.79□□□□□ -1.96
HMGN4-202ENST00000477243 MAST3O60307 1309 aa2.79□□□□□ -1.96
HMGN4-202ENST00000477243 CPED1A4D0V7 1026 aa2.79□□□□□ -1.96
HMGN4-202ENST00000477243 GSAPA4D1B5 854 aa2.79□□□□□ -1.96
HMGN4-202ENST00000477243 MAGEA13PA6NCF6 341 aa2.79□□□□□ -1.96
HMGN4-202ENST00000477243 TMEM8BA6NDV4 472 aa2.79□□□□□ -1.96
HMGN4-202ENST00000477243 NEMP2A6NFY4 417 aa2.79□□□□□ -1.96
HMGN4-202ENST00000477243 C4orf47A7E2U8 309 aa2.79□□□□□ -1.96
HMGN4-202ENST00000477243 PALM2-AKAP2B1ALY0 433 aaPredicted RBP2.79□□□□□ -1.96
HMGN4-202ENST00000477243 RSPH10B2B2RC85 870 aa2.79□□□□□ -1.96
HMGN4-202ENST00000477243 KLRF2D3W0D1 207 aa2.79□□□□□ -1.96
HMGN4-202ENST00000477243 H3BQ06 376 aaPredicted RBP2.79□□□□□ -1.96
HMGN4-202ENST00000477243 PTGESO14684 152 aa2.79□□□□□ -1.96
HMGN4-202ENST00000477243 ALOX15BO15296 676 aa2.79□□□□□ -1.96
HMGN4-202ENST00000477243 PPIP5K2O43314 1243 aa2.79□□□□□ -1.96
HMGN4-202ENST00000477243 DCXO43602 365 aa2.79□□□□□ -1.96
HMGN4-202ENST00000477243 SNNO75324 88 aaPredicted RBP2.79□□□□□ -1.96
HMGN4-202ENST00000477243 CSO75390 466 aaKnown RBP2.79□□□□□ -1.96
HMGN4-202ENST00000477243 NME6O75414 186 aaPredicted RBP2.79□□□□□ -1.96
HMGN4-202ENST00000477243 PMPCBO75439 489 aa2.79□□□□□ -1.96
HMGN4-202ENST00000477243 CRTAPO75718 401 aaPredicted RBP2.79□□□□□ -1.96
HMGN4-202ENST00000477243 SUN1O94901 812 aa2.79□□□□□ -1.96
HMGN4-202ENST00000477243 KDM4BO94953 1096 aa2.79□□□□□ -1.96
HMGN4-202ENST00000477243 TJP3O95049 919 aa2.79□□□□□ -1.96
HMGN4-202ENST00000477243 GAS8O95995 478 aa2.79□□□□□ -1.96
HMGN4-202ENST00000477243 NDUFB10O96000 172 aa2.79□□□□□ -1.96
HMGN4-202ENST00000477243 APOA1P02647 267 aa2.79□□□□□ -1.96
HMGN4-202ENST00000477243 HPXP02790 462 aa2.79□□□□□ -1.96
HMGN4-202ENST00000477243 UGT2B4P06133 528 aa2.79□□□□□ -1.96
HMGN4-202ENST00000477243 C8AP07357 584 aa2.79□□□□□ -1.96
HMGN4-202ENST00000477243 FHP07954 510 aa2.79□□□□□ -1.96
HMGN4-202ENST00000477243 KRT19P08727 400 aa2.79□□□□□ -1.96
HMGN4-202ENST00000477243 RAB40ALP0C0E4 278 aa2.79□□□□□ -1.96
HMGN4-202ENST00000477243 IQCF3P0C7M6 154 aa2.79□□□□□ -1.96
HMGN4-202ENST00000477243 RSPH10BP0C881 870 aa2.79□□□□□ -1.96
HMGN4-202ENST00000477243 TROVE2P10155 538 aaKnown RBP eCLIP2.79□□□□□ -1.96
HMGN4-202ENST00000477243 ERVK-10P10266 1014 aa2.79□□□□□ -1.96
HMGN4-202ENST00000477243 RRASP10301 218 aa2.79□□□□□ -1.96
HMGN4-202ENST00000477243 SAGP10523 405 aaPredicted RBP2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms