RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 TMEFF2Q9UIK5 374 aaPredicted RBP7.01□□□□□ -1.29
BRCA1-214ENST00000477152 ARL5AQ9Y689 179 aa7.01□□□□□ -1.29
BRCA1-214ENST00000477152 TNRC6AQ8NDV7 1962 aaKnown RBP7.01□□□□□ -1.29
BRCA1-214ENST00000477152 A6NL46 340 aa7□□□□□ -1.29
BRCA1-214ENST00000477152 AGAP14A8MT82 685 aa7□□□□□ -1.29
BRCA1-214ENST00000477152 KCNN4O15554 427 aa7□□□□□ -1.29
BRCA1-214ENST00000477152 ZNF749O43361 778 aa7□□□□□ -1.29
BRCA1-214ENST00000477152 BUD23O43709 281 aaKnown RBP7□□□□□ -1.29
BRCA1-214ENST00000477152 FKBP9O95302 570 aa7□□□□□ -1.29
BRCA1-214ENST00000477152 THBDP07204 575 aa7□□□□□ -1.29
BRCA1-214ENST00000477152 OR56A5P0C7T3 313 aa7□□□□□ -1.29
BRCA1-214ENST00000477152 PECAM1P16284 738 aaPredicted RBP7□□□□□ -1.29
BRCA1-214ENST00000477152 RBL1P28749 1068 aa7□□□□□ -1.29
BRCA1-214ENST00000477152 TPP2P29144 1249 aaPredicted RBP7□□□□□ -1.29
BRCA1-214ENST00000477152 OTX2P32243 289 aa7□□□□□ -1.29
BRCA1-214ENST00000477152 MC4RP32245 332 aa7□□□□□ -1.29
BRCA1-214ENST00000477152 RORAP35398 523 aa7□□□□□ -1.29
BRCA1-214ENST00000477152 NSG1P42857 185 aa7□□□□□ -1.29
BRCA1-214ENST00000477152 ARCN1P48444 511 aaKnown RBP7□□□□□ -1.29
BRCA1-214ENST00000477152 EIF3EP60228 445 aaKnown RBP7□□□□□ -1.29
BRCA1-214ENST00000477152 CACNG1Q06432 222 aa7□□□□□ -1.29
BRCA1-214ENST00000477152 ITIH4Q14624 930 aa7□□□□□ -1.29
BRCA1-214ENST00000477152 NAA25Q14CX7 972 aa7□□□□□ -1.29
BRCA1-214ENST00000477152 NKAPLQ5M9Q1 402 aa7□□□□□ -1.29
BRCA1-214ENST00000477152 ANKRD20A2Q5SQ80 823 aa7□□□□□ -1.29
BRCA1-214ENST00000477152 ANKRD20A1Q5TYW2 823 aa7□□□□□ -1.29
BRCA1-214ENST00000477152 ANKRD20A3Q5VUR7 823 aa7□□□□□ -1.29
BRCA1-214ENST00000477152 MLIPQ5VWP3 458 aa7□□□□□ -1.29
BRCA1-214ENST00000477152 CPZQ66K79 652 aa7□□□□□ -1.29
BRCA1-214ENST00000477152 ARHGEF18Q6ZSZ5 1173 aa7□□□□□ -1.29
BRCA1-214ENST00000477152 FGD2Q7Z6J4 655 aa7□□□□□ -1.29
BRCA1-214ENST00000477152 TMEM151AQ8N4L1 468 aa7□□□□□ -1.29
BRCA1-214ENST00000477152 FDCSPQ8NFU4 85 aa7□□□□□ -1.29
BRCA1-214ENST00000477152 PIWIL2Q8TC59 973 aaKnown RBP7□□□□□ -1.29
BRCA1-214ENST00000477152 ADAMTS17Q8TE56 1095 aa7□□□□□ -1.29
BRCA1-214ENST00000477152 STYXQ8WUJ0 223 aa7□□□□□ -1.29
BRCA1-214ENST00000477152 NINJ1Q92982 152 aa7□□□□□ -1.29
BRCA1-214ENST00000477152 SPATA13Q96N96 652 aa7□□□□□ -1.29
BRCA1-214ENST00000477152 TRAPPC9Q96Q05 1148 aa7□□□□□ -1.29
BRCA1-214ENST00000477152 CHP1Q99653 195 aa7□□□□□ -1.29
BRCA1-214ENST00000477152 PITPNM3Q9BZ71 974 aa7□□□□□ -1.29
BRCA1-214ENST00000477152 LRRC40Q9H9A6 602 aa7□□□□□ -1.29
BRCA1-214ENST00000477152 PCMTD2Q9NV79 361 aa7□□□□□ -1.29
BRCA1-214ENST00000477152 OR6C2Q9NZP2 312 aa7□□□□□ -1.29
BRCA1-214ENST00000477152 SAE1Q9UBE0 346 aaPredicted RBP7□□□□□ -1.29
BRCA1-214ENST00000477152 SLC5A6Q9Y289 635 aa7□□□□□ -1.29
BRCA1-214ENST00000477152 ASF1AQ9Y294 204 aa7□□□□□ -1.29
BRCA1-214ENST00000477152 B3GNT3Q9Y2A9 372 aa7□□□□□ -1.29
BRCA1-214ENST00000477152 HECTD1Q9ULT8 2610 aa7□□□□□ -1.29
BRCA1-214ENST00000477152 A0A0J9YY10 115 aa7□□□□□ -1.29
BRCA1-214ENST00000477152 H7C0S8 307 aa7□□□□□ -1.29
BRCA1-214ENST00000477152 K7EM74 188 aa7□□□□□ -1.29
BRCA1-214ENST00000477152 MYBL2P10244 700 aa7□□□□□ -1.29
BRCA1-214ENST00000477152 RBP3P10745 1247 aa7□□□□□ -1.29
BRCA1-214ENST00000477152 ACRV1P26436 265 aa7□□□□□ -1.29
BRCA1-214ENST00000477152 PTPN7P35236 360 aa7□□□□□ -1.29
BRCA1-214ENST00000477152 CD96P40200 585 aa7□□□□□ -1.29
BRCA1-214ENST00000477152 RWDD2BP57060 319 aa7□□□□□ -1.29
BRCA1-214ENST00000477152 SUMO1P63165 101 aaKnown RBP7□□□□□ -1.29
BRCA1-214ENST00000477152 CHAF1BQ13112 559 aa7□□□□□ -1.29
BRCA1-214ENST00000477152 AIMP2Q13155 320 aaKnown RBP7□□□□□ -1.29
BRCA1-214ENST00000477152 MYBPC3Q14896 1274 aa7□□□□□ -1.29
BRCA1-214ENST00000477152 KIR2DS3Q14952 304 aa7□□□□□ -1.29
BRCA1-214ENST00000477152 PARP6Q2NL67 630 aa7□□□□□ -1.29
BRCA1-214ENST00000477152 ZC3H12BQ5HYM0 836 aaKnown RBP7□□□□□ -1.29
BRCA1-214ENST00000477152 RHBDD2Q6NTF9 364 aa7□□□□□ -1.29
BRCA1-214ENST00000477152 DUS1LQ6P1R4 473 aaKnown RBP7□□□□□ -1.29
BRCA1-214ENST00000477152 SPESP1Q6UW49 350 aa7□□□□□ -1.29
BRCA1-214ENST00000477152 ZDHHC13Q8IUH4 622 aa7□□□□□ -1.29
BRCA1-214ENST00000477152 SLC34A3Q8N130 599 aa7□□□□□ -1.29
BRCA1-214ENST00000477152 UBL4BQ8N7F7 174 aa7□□□□□ -1.29
BRCA1-214ENST00000477152 OR52E1Q8NGJ3 308 aa7□□□□□ -1.29
BRCA1-214ENST00000477152 OR1L3Q8NH93 324 aa7□□□□□ -1.29
BRCA1-214ENST00000477152 UBE2Q2Q8WVN8 375 aa7□□□□□ -1.29
BRCA1-214ENST00000477152 RNF31Q96EP0 1072 aa7□□□□□ -1.29
BRCA1-214ENST00000477152 SPOCK3Q9BQ16 436 aa7□□□□□ -1.29
BRCA1-214ENST00000477152 RAB11FIP5Q9BXF6 653 aa7□□□□□ -1.29
BRCA1-214ENST00000477152 ARNT2Q9HBZ2 717 aa7□□□□□ -1.29
BRCA1-214ENST00000477152 ZC3H7BQ9UGR2 993 aaKnown RBP7□□□□□ -1.29
BRCA1-214ENST00000477152 ANAPC5Q9UJX4 755 aa7□□□□□ -1.29
BRCA1-214ENST00000477152 NXT1Q9UKK6 140 aaKnown RBP7□□□□□ -1.29
BRCA1-214ENST00000477152 PLCL2Q9UPR0 1127 aa7□□□□□ -1.29
BRCA1-214ENST00000477152 PTRH2Q9Y3E5 179 aaKnown RBP7□□□□□ -1.29
BRCA1-214ENST00000477152 COPG1Q9Y678 874 aaKnown RBP7□□□□□ -1.29
BRCA1-214ENST00000477152 PTPN13Q12923 2485 aa7□□□□□ -1.29
BRCA1-214ENST00000477152 NAV2Q8IVL1 2488 aa7□□□□□ -1.29
BRCA1-214ENST00000477152 ESPL1Q14674 2120 aa7□□□□□ -1.29
BRCA1-214ENST00000477152 ERI2A8K979 691 aaKnown RBP6.99□□□□□ -1.29
BRCA1-214ENST00000477152 CYSRT1A8MQ03 144 aa6.99□□□□□ -1.29
BRCA1-214ENST00000477152 F5H423 210 aaPredicted RBP6.99□□□□□ -1.29
BRCA1-214ENST00000477152 BTN3A1O00481 513 aa6.99□□□□□ -1.29
BRCA1-214ENST00000477152 GAPDHSO14556 408 aaPredicted RBP6.99□□□□□ -1.29
BRCA1-214ENST00000477152 ZSCAN9O15535 394 aaPredicted RBP6.99□□□□□ -1.29
BRCA1-214ENST00000477152 LDB2O43679 373 aa6.99□□□□□ -1.29
BRCA1-214ENST00000477152 AP2A1O95782 977 aa6.99□□□□□ -1.29
BRCA1-214ENST00000477152 ST6GAL1P15907 406 aa6.99□□□□□ -1.29
BRCA1-214ENST00000477152 PSMB4P28070 264 aa6.99□□□□□ -1.29
BRCA1-214ENST00000477152 HOXC12P31275 282 aa6.99□□□□□ -1.29
BRCA1-214ENST00000477152 LMAN1P49257 510 aa6.99□□□□□ -1.29
BRCA1-214ENST00000477152 AP2B1P63010 937 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms