RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 C9orf106Q8NAJ2 232 aa5.43□□□□□ -1.54
VPS50-212ENST00000476413 DMBX1Q8NFW5 382 aa5.43□□□□□ -1.54
VPS50-212ENST00000476413 SEPT1Q8WYJ6 367 aa5.43□□□□□ -1.54
VPS50-212ENST00000476413 CACNG6Q9BXT2 260 aa5.43□□□□□ -1.54
VPS50-212ENST00000476413 MIS12Q9H081 205 aa5.43□□□□□ -1.54
VPS50-212ENST00000476413 SHARPINQ9H0F6 387 aa5.43□□□□□ -1.54
VPS50-212ENST00000476413 UPF2Q9HAU5 1272 aaKnown RBP5.43□□□□□ -1.54
VPS50-212ENST00000476413 FGF21Q9NSA1 209 aa5.43□□□□□ -1.54
VPS50-212ENST00000476413 DENND3A2RUS2 1198 aa5.42□□□□□ -1.54
VPS50-212ENST00000476413 ANKRD61A6NGH8 418 aa5.42□□□□□ -1.54
VPS50-212ENST00000476413 SLC33A1O00400 549 aaPredicted RBP5.42□□□□□ -1.54
VPS50-212ENST00000476413 BUB3O43684 328 aa5.42□□□□□ -1.54
VPS50-212ENST00000476413 SNX3O60493 162 aa5.42□□□□□ -1.54
VPS50-212ENST00000476413 SLC16A8O95907 504 aa5.42□□□□□ -1.54
VPS50-212ENST00000476413 GP1BBP13224 206 aa5.42□□□□□ -1.54
VPS50-212ENST00000476413 PAX1P15863 534 aa5.42□□□□□ -1.54
VPS50-212ENST00000476413 AMD1P17707 334 aa5.42□□□□□ -1.54
VPS50-212ENST00000476413 CDH3P22223 829 aa5.42□□□□□ -1.54
VPS50-212ENST00000476413 MAZP56270 477 aaKnown RBP5.42□□□□□ -1.54
VPS50-212ENST00000476413 KLC1Q07866 573 aa5.42□□□□□ -1.54
VPS50-212ENST00000476413 HERC3Q15034 1050 aa5.42□□□□□ -1.54
VPS50-212ENST00000476413 NONOQ15233 471 aaKnown RBP eCLIP5.42□□□□□ -1.54
VPS50-212ENST00000476413 PHKG1Q16816 387 aa5.42□□□□□ -1.54
VPS50-212ENST00000476413 ZC2HC1CQ53FD0 456 aaPredicted RBP5.42□□□□□ -1.54
VPS50-212ENST00000476413 CCDC158Q5M9N0 1113 aa5.42□□□□□ -1.54
VPS50-212ENST00000476413 OR4A47Q6IF82 309 aa5.42□□□□□ -1.54
VPS50-212ENST00000476413 PODNL1Q6PEZ8 512 aa5.42□□□□□ -1.54
VPS50-212ENST00000476413 CDK20Q8IZL9 346 aa5.42□□□□□ -1.54
VPS50-212ENST00000476413 ZNF383Q8NA42 475 aa5.42□□□□□ -1.54
VPS50-212ENST00000476413 CTCFLQ8NI51 663 aaPredicted RBP5.42□□□□□ -1.54
VPS50-212ENST00000476413 CENPTQ96BT3 561 aa5.42□□□□□ -1.54
VPS50-212ENST00000476413 SNRNP40Q96DI7 357 aaKnown RBP5.42□□□□□ -1.54
VPS50-212ENST00000476413 SGF29Q96ES7 293 aa5.42□□□□□ -1.54
VPS50-212ENST00000476413 SENP5Q96HI0 755 aaPredicted RBP5.42□□□□□ -1.54
VPS50-212ENST00000476413 MAP3K3Q99759 626 aa5.42□□□□□ -1.54
VPS50-212ENST00000476413 RHNO1Q9BSD3 238 aa5.42□□□□□ -1.54
VPS50-212ENST00000476413 OR2B2Q9GZK3 357 aa5.42□□□□□ -1.54
VPS50-212ENST00000476413 ZMYND12Q9H0C1 365 aa5.42□□□□□ -1.54
VPS50-212ENST00000476413 SNX25Q9H3E2 840 aa5.42□□□□□ -1.54
VPS50-212ENST00000476413 DNAJC17Q9NVM6 304 aaKnown RBP5.42□□□□□ -1.54
VPS50-212ENST00000476413 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.42□□□□□ -1.54
VPS50-212ENST00000476413 WDR81Q562E7 1941 aa5.41□□□□□ -1.54
VPS50-212ENST00000476413 C2orf81A6NN90 581 aa5.41□□□□□ -1.54
VPS50-212ENST00000476413 F8VVB4 439 aa5.41□□□□□ -1.54
VPS50-212ENST00000476413 F8VWA3 439 aa5.41□□□□□ -1.54
VPS50-212ENST00000476413 ZNF263O14978 683 aa5.41□□□□□ -1.54
VPS50-212ENST00000476413 ATP6V0E1O15342 81 aa5.41□□□□□ -1.54
VPS50-212ENST00000476413 DDHD2O94830 711 aa5.41□□□□□ -1.54
VPS50-212ENST00000476413 F7P08709 466 aaPredicted RBP5.41□□□□□ -1.54
VPS50-212ENST00000476413 MYL6BP14649 208 aa5.41□□□□□ -1.54
VPS50-212ENST00000476413 EPORP19235 508 aa5.41□□□□□ -1.54
VPS50-212ENST00000476413 ITIH1P19827 911 aa5.41□□□□□ -1.54
VPS50-212ENST00000476413 SOAT1P35610 550 aa5.41□□□□□ -1.54
VPS50-212ENST00000476413 FRKP42685 505 aaPredicted RBP5.41□□□□□ -1.54
VPS50-212ENST00000476413 ST8SIA6P61647 398 aa5.41□□□□□ -1.54
VPS50-212ENST00000476413 GCNT1Q02742 428 aa5.41□□□□□ -1.54
VPS50-212ENST00000476413 FOLH1Q04609 750 aa5.41□□□□□ -1.54
VPS50-212ENST00000476413 PPP2R5CQ13362 524 aa5.41□□□□□ -1.54
VPS50-212ENST00000476413 SMU1Q2TAY7 513 aa5.41□□□□□ -1.54
VPS50-212ENST00000476413 SPOUT1Q5T280 376 aaKnown RBP5.41□□□□□ -1.54
VPS50-212ENST00000476413 NDUFAF2Q8N183 169 aa5.41□□□□□ -1.54
VPS50-212ENST00000476413 MSANTD4Q8NCY6 345 aa5.41□□□□□ -1.54
VPS50-212ENST00000476413 PYCR2Q96C36 320 aa5.41□□□□□ -1.54
VPS50-212ENST00000476413 GDAP1L1Q96MZ0 367 aa5.41□□□□□ -1.54
VPS50-212ENST00000476413 NDNQ99608 321 aa5.41□□□□□ -1.54
VPS50-212ENST00000476413 HNRNPABQ99729 332 aaKnown RBP5.41□□□□□ -1.54
VPS50-212ENST00000476413 URM1Q9BTM9 101 aaKnown RBP5.41□□□□□ -1.54
VPS50-212ENST00000476413 ACTL8Q9H568 366 aa5.41□□□□□ -1.54
VPS50-212ENST00000476413 IL1RAPL2Q9NP60 686 aa5.41□□□□□ -1.54
VPS50-212ENST00000476413 RAB9BQ9NP90 201 aa5.41□□□□□ -1.54
VPS50-212ENST00000476413 IARS2Q9NSE4 1012 aaKnown RBP5.41□□□□□ -1.54
VPS50-212ENST00000476413 SLCO1C1Q9NYB5 712 aa5.41□□□□□ -1.54
VPS50-212ENST00000476413 VPS18Q9P253 973 aa5.41□□□□□ -1.54
VPS50-212ENST00000476413 HBS1LQ9Y450 684 aaKnown RBP5.41□□□□□ -1.54
VPS50-212ENST00000476413 KLK4Q9Y5K2 254 aa5.41□□□□□ -1.54
VPS50-212ENST00000476413 SNX5Q9Y5X3 404 aa5.41□□□□□ -1.54
VPS50-212ENST00000476413 SCN5AQ14524 2016 aa5.4□□□□□ -1.54
VPS50-212ENST00000476413 ARID2Q68CP9 1835 aa5.4□□□□□ -1.54
VPS50-212ENST00000476413 C2CD4DB7Z1M9 353 aa5.4□□□□□ -1.54
VPS50-212ENST00000476413 PRSS46E5RG02 174 aa5.4□□□□□ -1.54
VPS50-212ENST00000476413 O00370 1275 aa5.4□□□□□ -1.54
VPS50-212ENST00000476413 CCND3P30281 292 aaPredicted RBP5.4□□□□□ -1.54
VPS50-212ENST00000476413 DLX5P56178 289 aa5.4□□□□□ -1.54
VPS50-212ENST00000476413 MORF4L2Q15014 288 aa5.4□□□□□ -1.54
VPS50-212ENST00000476413 ZRSR1Q15695 479 aaKnown RBP5.4□□□□□ -1.54
VPS50-212ENST00000476413 KBTBD12Q3ZCT8 623 aa5.4□□□□□ -1.54
VPS50-212ENST00000476413 ZNF672Q499Z4 452 aaPredicted RBP5.4□□□□□ -1.54
VPS50-212ENST00000476413 IQCCQ4KMZ1 466 aa5.4□□□□□ -1.54
VPS50-212ENST00000476413 SLC39A12Q504Y0 691 aa5.4□□□□□ -1.54
VPS50-212ENST00000476413 SLC25A53Q5H9E4 307 aa5.4□□□□□ -1.54
VPS50-212ENST00000476413 LYSMD4Q5XG99 296 aa5.4□□□□□ -1.54
VPS50-212ENST00000476413 CASC4Q6P4E1 433 aa5.4□□□□□ -1.54
VPS50-212ENST00000476413 ISCA2Q86U28 154 aa5.4□□□□□ -1.54
VPS50-212ENST00000476413 UNC45BQ8IWX7 931 aa5.4□□□□□ -1.54
VPS50-212ENST00000476413 C4orf19Q8IY42 314 aa5.4□□□□□ -1.54
VPS50-212ENST00000476413 KLHDC1Q8N7A1 406 aa5.4□□□□□ -1.54
VPS50-212ENST00000476413 NCOA7Q8NI08 942 aa5.4□□□□□ -1.54
VPS50-212ENST00000476413 ZNF354BQ96LW1 612 aa5.4□□□□□ -1.54
VPS50-212ENST00000476413 MRPL9Q9BYD2 267 aaKnown RBP5.4□□□□□ -1.54
VPS50-212ENST00000476413 FAM207AQ9NSI2 230 aaPredicted RBP5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms