RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 GOLGA8QA0A0J9YX86 632 aa6.39□□□□□ -1.39
ATG4A-207ENST00000474825 FAM221BA6H8Z2 402 aa6.39□□□□□ -1.39
ATG4A-207ENST00000474825 GOLGA8OA6NCC3 632 aa6.39□□□□□ -1.39
ATG4A-207ENST00000474825 PRR5-ARHGAP8B1AHC4 643 aa6.39□□□□□ -1.39
ATG4A-207ENST00000474825 GOLGA8NF8WBI6 632 aa6.39□□□□□ -1.39
ATG4A-207ENST00000474825 TLR4O00206 839 aa6.39□□□□□ -1.39
ATG4A-207ENST00000474825 SLC28A1O00337 649 aa6.39□□□□□ -1.39
ATG4A-207ENST00000474825 FOXE1O00358 373 aaPredicted RBP6.39□□□□□ -1.39
ATG4A-207ENST00000474825 MANBAO00462 879 aa6.39□□□□□ -1.39
ATG4A-207ENST00000474825 GIPC1O14908 333 aa6.39□□□□□ -1.39
ATG4A-207ENST00000474825 LSM1O15116 133 aaKnown RBP6.39□□□□□ -1.39
ATG4A-207ENST00000474825 DNAJC8O75937 253 aaPredicted RBP6.39□□□□□ -1.39
ATG4A-207ENST00000474825 CHEK2O96017 543 aa6.39□□□□□ -1.39
ATG4A-207ENST00000474825 KRT6AP02538 564 aa6.39□□□□□ -1.39
ATG4A-207ENST00000474825 KRT6BP04259 564 aa6.39□□□□□ -1.39
ATG4A-207ENST00000474825 ALDOCP09972 364 aaKnown RBP6.39□□□□□ -1.39
ATG4A-207ENST00000474825 C1GALT1C1LP0DN25 315 aa6.39□□□□□ -1.39
ATG4A-207ENST00000474825 F3P13726 295 aa6.39□□□□□ -1.39
ATG4A-207ENST00000474825 HSD3B1P14060 373 aa6.39□□□□□ -1.39
ATG4A-207ENST00000474825 LBPP18428 481 aa6.39□□□□□ -1.39
ATG4A-207ENST00000474825 BCKDHBP21953 392 aa6.39□□□□□ -1.39
ATG4A-207ENST00000474825 CALB2P22676 271 aa6.39□□□□□ -1.39
ATG4A-207ENST00000474825 ITPKAP23677 461 aa6.39□□□□□ -1.39
ATG4A-207ENST00000474825 HSD3B2P26439 372 aa6.39□□□□□ -1.39
ATG4A-207ENST00000474825 RPL10P27635 214 aaKnown RBP6.39□□□□□ -1.39
ATG4A-207ENST00000474825 CD38P28907 300 aa6.39□□□□□ -1.39
ATG4A-207ENST00000474825 HALP42357 657 aa6.39□□□□□ -1.39
ATG4A-207ENST00000474825 SCTRP47872 440 aa6.39□□□□□ -1.39
ATG4A-207ENST00000474825 KRT6CP48668 564 aa6.39□□□□□ -1.39
ATG4A-207ENST00000474825 RAB28P51157 221 aa6.39□□□□□ -1.39
ATG4A-207ENST00000474825 NXPH1P58417 271 aa6.39□□□□□ -1.39
ATG4A-207ENST00000474825 NCALDP61601 193 aa6.39□□□□□ -1.39
ATG4A-207ENST00000474825 TBPL1P62380 186 aa6.39□□□□□ -1.39
ATG4A-207ENST00000474825 RPL6Q02878 288 aaKnown RBP6.39□□□□□ -1.39
ATG4A-207ENST00000474825 EMX2Q04743 252 aa6.39□□□□□ -1.39
ATG4A-207ENST00000474825 KLF10Q13118 480 aa6.39□□□□□ -1.39
ATG4A-207ENST00000474825 LAPTM5Q13571 262 aa6.39□□□□□ -1.39
ATG4A-207ENST00000474825 DOC2AQ14183 400 aa6.39□□□□□ -1.39
ATG4A-207ENST00000474825 FASTKQ14296 549 aaKnown RBP6.39□□□□□ -1.39
ATG4A-207ENST00000474825 NAA25Q14CX7 972 aa6.39□□□□□ -1.39
ATG4A-207ENST00000474825 ABRAXAS2Q15018 415 aa6.39□□□□□ -1.39
ATG4A-207ENST00000474825 GSTA3Q16772 222 aa6.39□□□□□ -1.39
ATG4A-207ENST00000474825 ZNF423Q2M1K9 1284 aa6.39□□□□□ -1.39
ATG4A-207ENST00000474825 C6orf136Q5SQH8 315 aa6.39□□□□□ -1.39
ATG4A-207ENST00000474825 PEAR1Q5VY43 1037 aaPredicted RBP6.39□□□□□ -1.39
ATG4A-207ENST00000474825 GRHL2Q6ISB3 625 aa6.39□□□□□ -1.39
ATG4A-207ENST00000474825 NXPE4Q6UWF7 544 aa6.39□□□□□ -1.39
ATG4A-207ENST00000474825 LONP2Q86WA8 852 aa6.39□□□□□ -1.39
ATG4A-207ENST00000474825 PARP9Q8IXQ6 854 aa6.39□□□□□ -1.39
ATG4A-207ENST00000474825 RBM12BQ8IXT5 1001 aaKnown RBP6.39□□□□□ -1.39
ATG4A-207ENST00000474825 LAS2Q8IYD9 372 aa6.39□□□□□ -1.39
ATG4A-207ENST00000474825 PHACTR4Q8IZ21 702 aa6.39□□□□□ -1.39
ATG4A-207ENST00000474825 SFRP1Q8N474 314 aa6.39□□□□□ -1.39
ATG4A-207ENST00000474825 LINC01555Q8NAE3 123 aa6.39□□□□□ -1.39
ATG4A-207ENST00000474825 OR2T11Q8NH01 316 aa6.39□□□□□ -1.39
ATG4A-207ENST00000474825 CCL4L1Q8NHW4 92 aa6.39□□□□□ -1.39
ATG4A-207ENST00000474825 TSPEARQ8WU66 669 aa6.39□□□□□ -1.39
ATG4A-207ENST00000474825 SMPDL3AQ92484 453 aa6.39□□□□□ -1.39
ATG4A-207ENST00000474825 NEIL2Q969S2 332 aa6.39□□□□□ -1.39
ATG4A-207ENST00000474825 ATP6V1E2Q96A05 226 aa6.39□□□□□ -1.39
ATG4A-207ENST00000474825 PYCR2Q96C36 320 aa6.39□□□□□ -1.39
ATG4A-207ENST00000474825 CDK15Q96Q40 435 aa6.39□□□□□ -1.39
ATG4A-207ENST00000474825 PHOX2BQ99453 314 aa6.39□□□□□ -1.39
ATG4A-207ENST00000474825 EFCAB11Q9BUY7 163 aa6.39□□□□□ -1.39
ATG4A-207ENST00000474825 BRINP2Q9C0B6 783 aa6.39□□□□□ -1.39
ATG4A-207ENST00000474825 C1orf21Q9H246 121 aa6.39□□□□□ -1.39
ATG4A-207ENST00000474825 RHBGQ9H310 441 aa6.39□□□□□ -1.39
ATG4A-207ENST00000474825 NT5DC2Q9H857 520 aa6.39□□□□□ -1.39
ATG4A-207ENST00000474825 BRF2Q9HAW0 419 aa6.39□□□□□ -1.39
ATG4A-207ENST00000474825 CCDC177Q9NQR7 707 aaPredicted RBP6.39□□□□□ -1.39
ATG4A-207ENST00000474825 PRDM8Q9NQV8 689 aa6.39□□□□□ -1.39
ATG4A-207ENST00000474825 SDR39U1Q9NRG7 319 aaPredicted RBP6.39□□□□□ -1.39
ATG4A-207ENST00000474825 TXLNGQ9NUQ3 528 aa6.39□□□□□ -1.39
ATG4A-207ENST00000474825 POT1Q9NUX5 634 aa6.39□□□□□ -1.39
ATG4A-207ENST00000474825 ARL8BQ9NVJ2 186 aa6.39□□□□□ -1.39
ATG4A-207ENST00000474825 RIC8BQ9NVN3 520 aa6.39□□□□□ -1.39
ATG4A-207ENST00000474825 SPATA6Q9NWH7 488 aaPredicted RBP6.39□□□□□ -1.39
ATG4A-207ENST00000474825 SIRT5Q9NXA8 310 aa6.39□□□□□ -1.39
ATG4A-207ENST00000474825 OR6C2Q9NZP2 312 aa6.39□□□□□ -1.39
ATG4A-207ENST00000474825 TAGLN3Q9UI15 199 aa6.39□□□□□ -1.39
ATG4A-207ENST00000474825 FBXO4Q9UKT5 387 aa6.39□□□□□ -1.39
ATG4A-207ENST00000474825 SNX6Q9UNH7 406 aa6.39□□□□□ -1.39
ATG4A-207ENST00000474825 PSMD13Q9UNM6 376 aa6.39□□□□□ -1.39
ATG4A-207ENST00000474825 PCDHGA11Q9Y5H2 935 aa6.39□□□□□ -1.39
ATG4A-207ENST00000474825 KLK4Q9Y5K2 254 aa6.39□□□□□ -1.39
ATG4A-207ENST00000474825 GPR45Q9Y5Y3 372 aa6.39□□□□□ -1.39
ATG4A-207ENST00000474825 COPG1Q9Y678 874 aaKnown RBP6.39□□□□□ -1.39
ATG4A-207ENST00000474825 COLEC10Q9Y6Z7 277 aa6.39□□□□□ -1.39
ATG4A-207ENST00000474825 ZNF318Q5VUA4 2279 aa6.39□□□□□ -1.39
ATG4A-207ENST00000474825 DNAH14Q0VDD8 3507 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 KIR2DS5A0A0G2JLQ3 304 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 A0A0G2JNG1 304 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 OR52A4PA6NMU1 304 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 E7EQ34 232 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 E9PBE3 544 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 KIR2DS3K7RE56 304 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 CLGNO14967 610 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 ANKRD28O15084 1053 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 UBDO15205 165 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 KDM1AO60341 852 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms