RNA–Protein interactions for RNA: ENST00000474725.5

EDEM3-206, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 2

Gene EDEM3, Length 1,911 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-206ENST00000474725 PFDN4Q9NQP4 134 aa19.59■□□□□ 0.73
EDEM3-206ENST00000474725 SPASTQ9UBP0 616 aa19.59■□□□□ 0.73
EDEM3-206ENST00000474725 KIR2DS5A0A0G2JLQ3 304 aa19.58■□□□□ 0.72
EDEM3-206ENST00000474725 A0A0G2JNG1 304 aa19.58■□□□□ 0.72
EDEM3-206ENST00000474725 OR5K4A6NMS3 321 aa19.58■□□□□ 0.72
EDEM3-206ENST00000474725 KIR2DS3K7RE56 304 aa19.58■□□□□ 0.72
EDEM3-206ENST00000474725 KDM1AO60341 852 aa19.58■□□□□ 0.72
EDEM3-206ENST00000474725 KRT6AP02538 564 aa19.58■□□□□ 0.72
EDEM3-206ENST00000474725 KRT6BP04259 564 aa19.58■□□□□ 0.72
EDEM3-206ENST00000474725 KRT6CP48668 564 aa19.58■□□□□ 0.72
EDEM3-206ENST00000474725 HNRNPKP61978 463 aaKnown RBP eCLIP19.58■□□□□ 0.72
EDEM3-206ENST00000474725 KIR2DS5Q14953 304 aa19.58■□□□□ 0.72
EDEM3-206ENST00000474725 GRHL2Q6ISB3 625 aa19.58■□□□□ 0.72
EDEM3-206ENST00000474725 NXPE4Q6UWF7 544 aa19.58■□□□□ 0.72
EDEM3-206ENST00000474725 Q6ZSR9 355 aa19.58■□□□□ 0.72
EDEM3-206ENST00000474725 BMP8AQ7Z5Y6 402 aa19.58■□□□□ 0.72
EDEM3-206ENST00000474725 OR4E2Q8NGC2 313 aa19.58■□□□□ 0.72
EDEM3-206ENST00000474725 SLC37A2Q8TED4 501 aa19.58■□□□□ 0.72
EDEM3-206ENST00000474725 ZDHHC1Q8WTX9 485 aa19.58■□□□□ 0.72
EDEM3-206ENST00000474725 LCN9Q8WX39 176 aa19.58■□□□□ 0.72
EDEM3-206ENST00000474725 NELL1Q92832 810 aa19.58■□□□□ 0.72
EDEM3-206ENST00000474725 USP7Q93009 1102 aa19.58■□□□□ 0.72
EDEM3-206ENST00000474725 CPNE7Q9UBL6 633 aa19.58■□□□□ 0.72
EDEM3-206ENST00000474725 SNX6Q9UNH7 406 aa19.58■□□□□ 0.72
EDEM3-206ENST00000474725 SPAG17Q6Q759 2223 aa19.57■□□□□ 0.72
EDEM3-206ENST00000474725 VPS4BO75351 444 aa19.57■□□□□ 0.72
EDEM3-206ENST00000474725 PDYNP01213 254 aa19.57■□□□□ 0.72
EDEM3-206ENST00000474725 VIPP01282 170 aa19.57■□□□□ 0.72
EDEM3-206ENST00000474725 C1GALT1C1LP0DN25 315 aa19.57■□□□□ 0.72
EDEM3-206ENST00000474725 GNSP15586 552 aa19.57■□□□□ 0.72
EDEM3-206ENST00000474725 AVPR2P30518 371 aa19.57■□□□□ 0.72
EDEM3-206ENST00000474725 HNF4AP41235 474 aa19.57■□□□□ 0.72
EDEM3-206ENST00000474725 NEK2P51955 445 aa19.57■□□□□ 0.72
EDEM3-206ENST00000474725 UBE2IP63279 158 aaKnown RBP19.57■□□□□ 0.72
EDEM3-206ENST00000474725 E2F2Q14209 437 aa19.57■□□□□ 0.72
EDEM3-206ENST00000474725 TBCCQ15814 346 aa19.57■□□□□ 0.72
EDEM3-206ENST00000474725 KIF19Q2TAC6 998 aa19.57■□□□□ 0.72
EDEM3-206ENST00000474725 ATG9BQ674R7 924 aa19.57■□□□□ 0.72
EDEM3-206ENST00000474725 CHSY3Q70JA7 882 aa19.57■□□□□ 0.72
EDEM3-206ENST00000474725 CEP68Q76N32 757 aa19.57■□□□□ 0.72
EDEM3-206ENST00000474725 GKN2Q86XP6 184 aa19.57■□□□□ 0.72
EDEM3-206ENST00000474725 TREML1Q86YW5 311 aa19.57■□□□□ 0.72
EDEM3-206ENST00000474725 SFRP1Q8N474 314 aa19.57■□□□□ 0.72
EDEM3-206ENST00000474725 PTCD3Q96EY7 689 aaKnown RBP19.57■□□□□ 0.72
EDEM3-206ENST00000474725 PCBD2Q9H0N5 130 aa19.57■□□□□ 0.72
EDEM3-206ENST00000474725 ELOVL6Q9H5J4 265 aa19.57■□□□□ 0.72
EDEM3-206ENST00000474725 PILRBQ9UKJ0 227 aa19.57■□□□□ 0.72
EDEM3-206ENST00000474725 MUC3AQ02505 3323 aa19.57■□□□□ 0.72
EDEM3-206ENST00000474725 NCOR1O75376 2440 aa19.57■□□□□ 0.72
EDEM3-206ENST00000474725 PRR5-ARHGAP8B1AHC4 643 aa19.57■□□□□ 0.72
EDEM3-206ENST00000474725 B4DGG1 531 aa19.57■□□□□ 0.72
EDEM3-206ENST00000474725 YY2O15391 372 aa19.57■□□□□ 0.72
EDEM3-206ENST00000474725 SDC3O75056 442 aa19.57■□□□□ 0.72
EDEM3-206ENST00000474725 PEX11AO75192 247 aa19.57■□□□□ 0.72
EDEM3-206ENST00000474725 CDH1P12830 882 aa19.57■□□□□ 0.72
EDEM3-206ENST00000474725 RNF165Q6ZSG1 346 aa19.57■□□□□ 0.72
EDEM3-206ENST00000474725 AMIGO1Q86WK6 493 aa19.57■□□□□ 0.72
EDEM3-206ENST00000474725 C17orf64Q86WR6 236 aa19.57■□□□□ 0.72
EDEM3-206ENST00000474725 ZNF548Q8NEK5 533 aaPredicted RBP19.57■□□□□ 0.72
EDEM3-206ENST00000474725 SELENOMQ8WWX9 145 aa19.57■□□□□ 0.72
EDEM3-206ENST00000474725 WDR34Q96EX3 536 aa19.57■□□□□ 0.72
EDEM3-206ENST00000474725 POT1Q9NUX5 634 aa19.57■□□□□ 0.72
EDEM3-206ENST00000474725 RIC8BQ9NVN3 520 aa19.57■□□□□ 0.72
EDEM3-206ENST00000474725 DOLKQ9UPQ8 538 aa19.57■□□□□ 0.72
EDEM3-206ENST00000474725 CCL27Q9Y4X3 112 aa19.57■□□□□ 0.72
EDEM3-206ENST00000474725 SNX11Q9Y5W9 270 aa19.57■□□□□ 0.72
EDEM3-206ENST00000474725 ARHGEF17Q96PE2 2063 aaPredicted RBP19.56■□□□□ 0.72
EDEM3-206ENST00000474725 ZDBF2Q9HCK1 2354 aa19.56■□□□□ 0.72
EDEM3-206ENST00000474725 CAPN14A8MX76 684 aa19.56■□□□□ 0.72
EDEM3-206ENST00000474725 UBDO15205 165 aa19.56■□□□□ 0.72
EDEM3-206ENST00000474725 AQP9O43315 295 aa19.56■□□□□ 0.72
EDEM3-206ENST00000474725 PRR35P0CG20 571 aa19.56■□□□□ 0.72
EDEM3-206ENST00000474725 SLC2A4P14672 509 aa19.56■□□□□ 0.72
EDEM3-206ENST00000474725 LBPP18428 481 aa19.56■□□□□ 0.72
EDEM3-206ENST00000474725 SHMT2P34897 504 aa19.56■□□□□ 0.72
EDEM3-206ENST00000474725 CTSKP43235 329 aa19.56■□□□□ 0.72
EDEM3-206ENST00000474725 BNC1Q01954 994 aa19.56■□□□□ 0.72
EDEM3-206ENST00000474725 GPR18Q14330 331 aa19.56■□□□□ 0.72
EDEM3-206ENST00000474725 FRG2Q64ET8 278 aa19.56■□□□□ 0.72
EDEM3-206ENST00000474725 FAM91A1Q658Y4 838 aa19.56■□□□□ 0.72
EDEM3-206ENST00000474725 TRIM46Q7Z4K8 759 aa19.56■□□□□ 0.72
EDEM3-206ENST00000474725 ZC3H10Q96K80 434 aaKnown RBP19.56■□□□□ 0.72
EDEM3-206ENST00000474725 FRG2BQ96QU4 278 aa19.56■□□□□ 0.72
EDEM3-206ENST00000474725 ZNF385DQ9H6B1 395 aa19.56■□□□□ 0.72
EDEM3-206ENST00000474725 ARL8BQ9NVJ2 186 aa19.56■□□□□ 0.72
EDEM3-206ENST00000474725 SPHK1Q9NYA1 384 aa19.56■□□□□ 0.72
EDEM3-206ENST00000474725 TNRC6BQ9UPQ9 1833 aaKnown RBP19.55■□□□□ 0.72
EDEM3-206ENST00000474725 H0YIV9 168 aa19.55■□□□□ 0.72
EDEM3-206ENST00000474725 SLC28A1O00337 649 aa19.55■□□□□ 0.72
EDEM3-206ENST00000474725 PRICKLE3O43900 615 aaPredicted RBP19.55■□□□□ 0.72
EDEM3-206ENST00000474725 ATP5HO75947 161 aa19.55■□□□□ 0.72
EDEM3-206ENST00000474725 SP9P0CG40 484 aa19.55■□□□□ 0.72
EDEM3-206ENST00000474725 PEBP1P30086 187 aaKnown RBP19.55■□□□□ 0.72
EDEM3-206ENST00000474725 MEF2AQ02078 507 aaPredicted RBP19.55■□□□□ 0.72
EDEM3-206ENST00000474725 SLBPQ14493 270 aaKnown RBP eCLIP19.55■□□□□ 0.72
EDEM3-206ENST00000474725 HOMEZQ8IX15 550 aa19.55■□□□□ 0.72
EDEM3-206ENST00000474725 RNF175Q8N4F7 328 aa19.55■□□□□ 0.72
EDEM3-206ENST00000474725 CPSF7Q8N684 471 aaKnown RBP19.55■□□□□ 0.72
EDEM3-206ENST00000474725 OR2A1Q8NGT9 310 aa19.55■□□□□ 0.72
EDEM3-206ENST00000474725 WDR20Q8TBZ3 569 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms