RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 DLGAP1O14490 977 aa9.5□□□□□ -0.89
USP39-214ENST00000474572 SOCS2O14508 198 aa9.5□□□□□ -0.89
USP39-214ENST00000474572 TXNDC9O14530 226 aa9.5□□□□□ -0.89
USP39-214ENST00000474572 AKAP10O43572 662 aa9.5□□□□□ -0.89
USP39-214ENST00000474572 SCN2BO60939 215 aa9.5□□□□□ -0.89
USP39-214ENST00000474572 ZCCHC18P0CG32 403 aa9.5□□□□□ -0.89
USP39-214ENST00000474572 NCK1P16333 377 aa9.5□□□□□ -0.89
USP39-214ENST00000474572 ZNF8P17098 575 aaPredicted RBP9.5□□□□□ -0.89
USP39-214ENST00000474572 PBLDP30039 288 aaPredicted RBP9.5□□□□□ -0.89
USP39-214ENST00000474572 S100A3P33764 101 aa9.5□□□□□ -0.89
USP39-214ENST00000474572 TRPC1P48995 793 aa9.5□□□□□ -0.89
USP39-214ENST00000474572 WNT3P56703 355 aa9.5□□□□□ -0.89
USP39-214ENST00000474572 TAS2R38P59533 333 aa9.5□□□□□ -0.89
USP39-214ENST00000474572 TBPL1P62380 186 aa9.5□□□□□ -0.89
USP39-214ENST00000474572 MYBPC1Q00872 1141 aa9.5□□□□□ -0.89
USP39-214ENST00000474572 HYAL1Q12794 435 aa9.5□□□□□ -0.89
USP39-214ENST00000474572 CNTN1Q12860 1018 aa9.5□□□□□ -0.89
USP39-214ENST00000474572 CAMK2GQ13555 558 aaPredicted RBP9.5□□□□□ -0.89
USP39-214ENST00000474572 UGT8Q16880 541 aa9.5□□□□□ -0.89
USP39-214ENST00000474572 GTDC1Q4AE62 458 aa9.5□□□□□ -0.89
USP39-214ENST00000474572 XKR6Q5GH73 641 aa9.5□□□□□ -0.89
USP39-214ENST00000474572 NHSL2Q5HYW2 709 aa9.5□□□□□ -0.89
USP39-214ENST00000474572 TMTC4Q5T4D3 741 aa9.5□□□□□ -0.89
USP39-214ENST00000474572 C6orf52Q5T4I8 152 aa9.5□□□□□ -0.89
USP39-214ENST00000474572 AGBL4Q5VU57 503 aa9.5□□□□□ -0.89
USP39-214ENST00000474572 EGFLAMQ63HQ2 1017 aa9.5□□□□□ -0.89
USP39-214ENST00000474572 CAPN13Q6MZZ7 669 aaPredicted RBP9.5□□□□□ -0.89
USP39-214ENST00000474572 SLCO4C1Q6ZQN7 724 aa9.5□□□□□ -0.89
USP39-214ENST00000474572 FKBP9P1Q75LS8 142 aa9.5□□□□□ -0.89
USP39-214ENST00000474572 TRIM74Q86UV6 250 aa9.5□□□□□ -0.89
USP39-214ENST00000474572 IFNEQ86WN2 208 aa9.5□□□□□ -0.89
USP39-214ENST00000474572 MMAAQ8IVH4 418 aaKnown RBP9.5□□□□□ -0.89
USP39-214ENST00000474572 LAS2Q8IYD9 372 aa9.5□□□□□ -0.89
USP39-214ENST00000474572 ST13P4Q8IZP2 240 aaPredicted RBP9.5□□□□□ -0.89
USP39-214ENST00000474572 GALNT4Q8N4A0 578 aa9.5□□□□□ -0.89
USP39-214ENST00000474572 PHC3Q8NDX5 983 aa9.5□□□□□ -0.89
USP39-214ENST00000474572 TNIP2Q8NFZ5 429 aa9.5□□□□□ -0.89
USP39-214ENST00000474572 OR8J2Q8NGG1 315 aa9.5□□□□□ -0.89
USP39-214ENST00000474572 OR9A1PQ8NGU1 263 aa9.5□□□□□ -0.89
USP39-214ENST00000474572 CHTF18Q8WVB6 975 aa9.5□□□□□ -0.89
USP39-214ENST00000474572 STARD8Q92502 1023 aa9.5□□□□□ -0.89
USP39-214ENST00000474572 FOXJ1Q92949 421 aa9.5□□□□□ -0.89
USP39-214ENST00000474572 MRPL38Q96DV4 380 aaKnown RBP9.5□□□□□ -0.89
USP39-214ENST00000474572 ITCHQ96J02 903 aa9.5□□□□□ -0.89
USP39-214ENST00000474572 HIC2Q96JB3 615 aa9.5□□□□□ -0.89
USP39-214ENST00000474572 TSSK3Q96PN8 268 aa9.5□□□□□ -0.89
USP39-214ENST00000474572 OR52E6Q96RD3 313 aa9.5□□□□□ -0.89
USP39-214ENST00000474572 MYADMQ96S97 322 aa9.5□□□□□ -0.89
USP39-214ENST00000474572 CIB1Q99828 191 aa9.5□□□□□ -0.89
USP39-214ENST00000474572 ANKRD60Q9BZ19 345 aa9.5□□□□□ -0.89
USP39-214ENST00000474572 ZDHHC5Q9C0B5 715 aa9.5□□□□□ -0.89
USP39-214ENST00000474572 FAM192AQ9GZU8 254 aa9.5□□□□□ -0.89
USP39-214ENST00000474572 OR2AG1Q9H205 316 aa9.5□□□□□ -0.89
USP39-214ENST00000474572 OR52A5Q9H2C5 316 aa9.5□□□□□ -0.89
USP39-214ENST00000474572 NKX2-4Q9H2Z4 354 aa9.5□□□□□ -0.89
USP39-214ENST00000474572 EPB41L1Q9H4G0 881 aa9.5□□□□□ -0.89
USP39-214ENST00000474572 EHD1Q9H4M9 534 aa9.5□□□□□ -0.89
USP39-214ENST00000474572 IKZF5Q9H5V7 419 aa9.5□□□□□ -0.89
USP39-214ENST00000474572 KAT8Q9H7Z6 458 aaKnown RBP9.5□□□□□ -0.89
USP39-214ENST00000474572 RMND5AQ9H871 391 aa9.5□□□□□ -0.89
USP39-214ENST00000474572 CERS4Q9HA82 394 aa9.5□□□□□ -0.89
USP39-214ENST00000474572 OLAHQ9NV23 265 aa9.5□□□□□ -0.89
USP39-214ENST00000474572 VPS29Q9UBQ0 182 aa9.5□□□□□ -0.89
USP39-214ENST00000474572 AURKCQ9UQB9 309 aa9.5□□□□□ -0.89
USP39-214ENST00000474572 PCDHGA11Q9Y5H2 935 aa9.5□□□□□ -0.89
USP39-214ENST00000474572 STON1Q9Y6Q2 735 aa9.5□□□□□ -0.89
USP39-214ENST00000474572 TICRRQ7Z2Z1 1910 aa9.5□□□□□ -0.89
USP39-214ENST00000474572 MYO7AQ13402 2215 aa9.5□□□□□ -0.89
USP39-214ENST00000474572 ARHGAP10A1A4S6 786 aa9.49□□□□□ -0.89
USP39-214ENST00000474572 ELOVL7A1L3X0 281 aa9.49□□□□□ -0.89
USP39-214ENST00000474572 ANTXRLA6NF34 631 aa9.49□□□□□ -0.89
USP39-214ENST00000474572 FOXE1O00358 373 aaPredicted RBP9.49□□□□□ -0.89
USP39-214ENST00000474572 POP7O75817 140 aaKnown RBP9.49□□□□□ -0.89
USP39-214ENST00000474572 SCELO95171 688 aa9.49□□□□□ -0.89
USP39-214ENST00000474572 RASAL1O95294 804 aa9.49□□□□□ -0.89
USP39-214ENST00000474572 TNFAIP8O95379 198 aa9.49□□□□□ -0.89
USP39-214ENST00000474572 APODP05090 189 aa9.49□□□□□ -0.89
USP39-214ENST00000474572 EPHX1P07099 455 aa9.49□□□□□ -0.89
USP39-214ENST00000474572 RETP07949 1114 aa9.49□□□□□ -0.89
USP39-214ENST00000474572 HOXB6P17509 224 aaKnown RBP9.49□□□□□ -0.89
USP39-214ENST00000474572 CKMT2P17540 419 aa9.49□□□□□ -0.89
USP39-214ENST00000474572 PSMC3P17980 439 aa9.49□□□□□ -0.89
USP39-214ENST00000474572 MAGEA10P43363 369 aaPredicted RBP9.49□□□□□ -0.89
USP39-214ENST00000474572 RAE1P78406 368 aaKnown RBP9.49□□□□□ -0.89
USP39-214ENST00000474572 SRSF11Q05519 484 aaKnown RBP9.49□□□□□ -0.89
USP39-214ENST00000474572 ABHD18Q0P651 414 aa9.49□□□□□ -0.89
USP39-214ENST00000474572 APOFQ13790 326 aa9.49□□□□□ -0.89
USP39-214ENST00000474572 MAP7Q14244 749 aa9.49□□□□□ -0.89
USP39-214ENST00000474572 CST6Q15828 149 aa9.49□□□□□ -0.89
USP39-214ENST00000474572 PLA2G4EQ3MJ16 856 aa9.49□□□□□ -0.89
USP39-214ENST00000474572 C2orf27AQ580R0 203 aa9.49□□□□□ -0.89
USP39-214ENST00000474572 FOXB2Q5VYV0 432 aa9.49□□□□□ -0.89
USP39-214ENST00000474572 MED27Q6P2C8 311 aa9.49□□□□□ -0.89
USP39-214ENST00000474572 PNCKQ6P2M8 343 aa9.49□□□□□ -0.89
USP39-214ENST00000474572 GALNT18Q6P9A2 607 aa9.49□□□□□ -0.89
USP39-214ENST00000474572 ZBTB49Q6ZSB9 765 aa9.49□□□□□ -0.89
USP39-214ENST00000474572 PDZD3Q86UT5 571 aa9.49□□□□□ -0.89
USP39-214ENST00000474572 GPR180Q86V85 440 aa9.49□□□□□ -0.89
USP39-214ENST00000474572 RALGPS2Q86X27 583 aaPredicted RBP9.49□□□□□ -0.89
USP39-214ENST00000474572 TRAPPC5Q8IUR0 188 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms