RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 RGCCQ9H4X1 137 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 PRMT8Q9NR22 394 aaPredicted RBP3.39□□□□□ -1.87
UBR3-208ENST00000474426 RGS18Q9NS28 235 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 MED17Q9NVC6 651 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 PCDHA4Q9UN74 947 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 DRG1Q9Y295 367 aaKnown RBP3.39□□□□□ -1.87
UBR3-208ENST00000474426 PLEKHA6Q9Y2H5 1048 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 WIF1Q9Y5W5 379 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 CARMIL2Q6F5E8 1435 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 SMARCA4P51532 1647 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 RCCD1A6NED2 376 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 KCNU1A8MYU2 1149 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 HACD1B0YJ81 288 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 MCIDASD6RGH6 385 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 KLRC4-KLRK1H3BQV0 150 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 GIPC1O14908 333 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 ADCY6O43306 1168 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 NOL4O94818 638 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 NADKO95544 446 aaPredicted RBP3.39□□□□□ -1.87
UBR3-208ENST00000474426 MBD3O95983 291 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 LCATP04180 440 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 OSMP13725 252 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 NELFEP18615 380 aaKnown RBP3.39□□□□□ -1.87
UBR3-208ENST00000474426 PCSK6P29122 969 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 FOXN2P32314 431 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 CABP4P57796 275 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 PTENP60484 403 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 TNFRSF9Q07011 255 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 GRIK2Q13002 908 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 ILKQ13418 452 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 OLIG2Q13516 323 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 ATP1A4Q13733 1029 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 TOMM34Q15785 309 aaPredicted RBP3.39□□□□□ -1.87
UBR3-208ENST00000474426 GRK1Q15835 563 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 PDK4Q16654 411 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 GOLGA7BQ2TAP0 167 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 UGT3A2Q3SY77 523 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 C9orf152Q5JTZ5 239 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 ARHGAP40Q5TG30 622 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 CDKAL1Q5VV42 579 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 CLEC9AQ6UXN8 241 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 THSD4Q6ZMP0 1018 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 TMEM26Q6ZUK4 368 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 SMIM15Q7Z3B0 74 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 PDZD3Q86UT5 571 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 ULK2Q8IYT8 1036 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 MIER2Q8N344 545 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 CLIP4Q8N3C7 705 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 COMMD1Q8N668 190 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 RASGEF1AQ8N9B8 481 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 ADAMTS14Q8WXS8 1223 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 THAP4Q8WY91 577 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 PIK3R3Q92569 461 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 TMEM186Q96B77 213 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 ERLEC1Q96DZ1 483 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 NUDT11Q96G61 164 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 C16orf58Q96GQ5 468 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 BTBD9Q96Q07 612 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 CCT8L2Q96SF2 557 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 MYOCQ99972 504 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 APOL2Q9BQE5 337 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 ANKRD60Q9BZ19 345 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 OR2B2Q9GZK3 357 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 MIOXQ9UGB7 285 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 MLXQ9UH92 298 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 RAPGEFL1Q9UHV5 662 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 FKBPLQ9UIM3 349 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 TBX20Q9UMR3 447 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 TP53TG5Q9Y2B4 290 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 PTRH2Q9Y3E5 179 aaKnown RBP3.39□□□□□ -1.87
UBR3-208ENST00000474426 PCDHB1Q9Y5F3 818 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 COPG1Q9Y678 874 aaKnown RBP3.39□□□□□ -1.87
UBR3-208ENST00000474426 FKBP7Q9Y680 259 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 SPATA31E1Q6ZUB1 1445 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 A0A0G2JLW4 131 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 FAM230AA0A1W2PPH8 454 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 FABP12A6NFH5 140 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 C4orf47A7E2U8 309 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 LEUTXA8MZ59 168 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 E7ESA3 106 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 NPIPA7E9PJI5 369 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 H7C4K7 107 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 ZNF862O60290 1169 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 OR6B1O95007 311 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 WDPCPO95876 746 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 CHRNGP07510 517 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 NPIPA8P0DM63 369 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 OGNP20774 298 aaKnown RBP3.39□□□□□ -1.87
UBR3-208ENST00000474426 TEAD1P28347 426 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 NUTF2P61970 127 aaKnown RBP3.39□□□□□ -1.87
UBR3-208ENST00000474426 DEFA6Q01524 100 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 TP53BP2Q13625 1128 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 ZNF273Q14593 569 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 GXYLT1Q4G148 440 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 PDLIM3Q53GG5 364 aaPredicted RBP3.39□□□□□ -1.87
UBR3-208ENST00000474426 ANGEL2Q5VTE6 544 aaKnown RBP3.39□□□□□ -1.87
UBR3-208ENST00000474426 NANOGP8Q6NSW7 305 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 GPAT2Q6NUI2 795 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 WDR88Q6ZMY6 472 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 PLEKHG7Q6ZR37 379 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms