RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 GPN3Q9UHW5 284 aaPredicted RBP13.65□□□□□ -0.22
VAMP4-203ENST00000474047 PDE10AQ9Y233 779 aa13.65□□□□□ -0.22
VAMP4-203ENST00000474047 FARSAQ9Y285 508 aaKnown RBP13.65□□□□□ -0.22
VAMP4-203ENST00000474047 ZFYVE26Q68DK2 2539 aa13.65□□□□□ -0.23
VAMP4-203ENST00000474047 A0A0J9YVX5 310 aa13.64□□□□□ -0.23
VAMP4-203ENST00000474047 E7ENX8 843 aa13.64□□□□□ -0.23
VAMP4-203ENST00000474047 HCRTR1O43613 425 aa13.64□□□□□ -0.23
VAMP4-203ENST00000474047 CREG1O75629 220 aa13.64□□□□□ -0.23
VAMP4-203ENST00000474047 EIF2S1P05198 315 aaKnown RBP13.64□□□□□ -0.23
VAMP4-203ENST00000474047 PTPN4P29074 926 aa13.64□□□□□ -0.23
VAMP4-203ENST00000474047 GABRA4P48169 554 aa13.64□□□□□ -0.23
VAMP4-203ENST00000474047 PGGT1BP53609 377 aa13.64□□□□□ -0.23
VAMP4-203ENST00000474047 ARSFP54793 590 aa13.64□□□□□ -0.23
VAMP4-203ENST00000474047 VSX2P58304 361 aaPredicted RBP13.64□□□□□ -0.23
VAMP4-203ENST00000474047 TAP2Q03519 686 aa13.64□□□□□ -0.23
VAMP4-203ENST00000474047 TBR1Q16650 682 aa13.64□□□□□ -0.23
VAMP4-203ENST00000474047 C1orf189Q5VU69 101 aa13.64□□□□□ -0.23
VAMP4-203ENST00000474047 ICE2Q659A1 982 aa13.64□□□□□ -0.23
VAMP4-203ENST00000474047 BORAQ6PGQ7 559 aa13.64□□□□□ -0.23
VAMP4-203ENST00000474047 CYS1Q717R9 158 aa13.64□□□□□ -0.23
VAMP4-203ENST00000474047 PPM1NQ8N819 430 aa13.64□□□□□ -0.23
VAMP4-203ENST00000474047 NOA1Q8NC60 698 aaKnown RBP13.64□□□□□ -0.23
VAMP4-203ENST00000474047 SEC14L1Q92503 715 aa13.64□□□□□ -0.23
VAMP4-203ENST00000474047 TTC9Q92623 222 aa13.64□□□□□ -0.23
VAMP4-203ENST00000474047 WBP1Q96G27 269 aa13.64□□□□□ -0.23
VAMP4-203ENST00000474047 C17orf62Q9BQA9 187 aa13.64□□□□□ -0.23
VAMP4-203ENST00000474047 TSPYL1Q9H0U9 437 aa13.64□□□□□ -0.23
VAMP4-203ENST00000474047 ACTL8Q9H568 366 aa13.64□□□□□ -0.23
VAMP4-203ENST00000474047 GPAMQ9HCL2 828 aa13.64□□□□□ -0.23
VAMP4-203ENST00000474047 CCDC177Q9NQR7 707 aaPredicted RBP13.64□□□□□ -0.23
VAMP4-203ENST00000474047 SMYD2Q9NRG4 433 aa13.64□□□□□ -0.23
VAMP4-203ENST00000474047 ARL15Q9NXU5 204 aa13.64□□□□□ -0.23
VAMP4-203ENST00000474047 STOX2Q9P2F5 926 aaPredicted RBP13.64□□□□□ -0.23
VAMP4-203ENST00000474047 SNX7Q9UNH6 387 aa13.64□□□□□ -0.23
VAMP4-203ENST00000474047 PCDHGA6Q9Y5G7 932 aa13.64□□□□□ -0.23
VAMP4-203ENST00000474047 CDC14CA4D256 554 aa13.64□□□□□ -0.23
VAMP4-203ENST00000474047 FAM159BA6NKW6 160 aa13.64□□□□□ -0.23
VAMP4-203ENST00000474047 CXorf49A8MYA2 514 aaPredicted RBP13.64□□□□□ -0.23
VAMP4-203ENST00000474047 TK2O00142 265 aa13.64□□□□□ -0.23
VAMP4-203ENST00000474047 SRPX2O60687 465 aaPredicted RBP13.64□□□□□ -0.23
VAMP4-203ENST00000474047 IMPA1P29218 277 aa13.64□□□□□ -0.23
VAMP4-203ENST00000474047 PHBP35232 272 aa13.64□□□□□ -0.23
VAMP4-203ENST00000474047 GP5P40197 560 aa13.64□□□□□ -0.23
VAMP4-203ENST00000474047 CCR10P46092 362 aa13.64□□□□□ -0.23
VAMP4-203ENST00000474047 TAS2R39P59534 338 aa13.64□□□□□ -0.23
VAMP4-203ENST00000474047 GPX6P59796 221 aa13.64□□□□□ -0.23
VAMP4-203ENST00000474047 ABATP80404 500 aa13.64□□□□□ -0.23
VAMP4-203ENST00000474047 POU4F1Q01851 419 aa13.64□□□□□ -0.23
VAMP4-203ENST00000474047 PRDX1Q06830 199 aaKnown RBP13.64□□□□□ -0.23
VAMP4-203ENST00000474047 USP10Q14694 798 aaKnown RBP13.64□□□□□ -0.23
VAMP4-203ENST00000474047 GRM7Q14831 915 aa13.64□□□□□ -0.23
VAMP4-203ENST00000474047 DEFB109BQ30KR1 87 aa13.64□□□□□ -0.23
VAMP4-203ENST00000474047 FBF1Q8TES7 1133 aa13.64□□□□□ -0.23
VAMP4-203ENST00000474047 FAM129AQ9BZQ8 928 aa13.64□□□□□ -0.23
VAMP4-203ENST00000474047 PCBD2Q9H0N5 130 aa13.64□□□□□ -0.23
VAMP4-203ENST00000474047 ATG10Q9H0Y0 220 aa13.64□□□□□ -0.23
VAMP4-203ENST00000474047 LRRC4CQ9HCJ2 640 aa13.64□□□□□ -0.23
VAMP4-203ENST00000474047 STARD5Q9NSY2 213 aa13.64□□□□□ -0.23
VAMP4-203ENST00000474047 ANKMY1Q9P2S6 941 aa13.64□□□□□ -0.23
VAMP4-203ENST00000474047 DHCR7Q9UBM7 475 aaKnown RBP13.64□□□□□ -0.23
VAMP4-203ENST00000474047 CFAP47Q6ZTR5 3102 aa13.63□□□□□ -0.23
VAMP4-203ENST00000474047 CTSVO60911 334 aa13.63□□□□□ -0.23
VAMP4-203ENST00000474047 GUCA1CO95843 209 aa13.63□□□□□ -0.23
VAMP4-203ENST00000474047 ZNF37AP17032 561 aaPredicted RBP13.63□□□□□ -0.23
VAMP4-203ENST00000474047 CCND1P24385 295 aa13.63□□□□□ -0.23
VAMP4-203ENST00000474047 SPRP35270 261 aaPredicted RBP13.63□□□□□ -0.23
VAMP4-203ENST00000474047 RORAP35398 523 aa13.63□□□□□ -0.23
VAMP4-203ENST00000474047 AP1S2P56377 157 aa13.63□□□□□ -0.23
VAMP4-203ENST00000474047 DCDP81605 110 aaKnown RBP13.63□□□□□ -0.23
VAMP4-203ENST00000474047 NAE1Q13564 534 aa13.63□□□□□ -0.23
VAMP4-203ENST00000474047 LY6DQ14210 128 aa13.63□□□□□ -0.23
VAMP4-203ENST00000474047 ZNF460Q14592 562 aa13.63□□□□□ -0.23
VAMP4-203ENST00000474047 PHKG1Q16816 387 aa13.63□□□□□ -0.23
VAMP4-203ENST00000474047 FAM214AQ32MH5 1076 aa13.63□□□□□ -0.23
VAMP4-203ENST00000474047 KBTBD12Q3ZCT8 623 aa13.63□□□□□ -0.23
VAMP4-203ENST00000474047 WASHC2DQ5SRD0 308 aa13.63□□□□□ -0.23
VAMP4-203ENST00000474047 GRTP1Q5TC63 336 aa13.63□□□□□ -0.23
VAMP4-203ENST00000474047 MLIPQ5VWP3 458 aa13.63□□□□□ -0.23
VAMP4-203ENST00000474047 RHBDD2Q6NTF9 364 aa13.63□□□□□ -0.23
VAMP4-203ENST00000474047 AGTRAPQ6RW13 159 aa13.63□□□□□ -0.23
VAMP4-203ENST00000474047 TTLL10Q6ZVT0 673 aa13.63□□□□□ -0.23
VAMP4-203ENST00000474047 ENDOVQ8N8Q3 282 aaKnown RBP13.63□□□□□ -0.23
VAMP4-203ENST00000474047 PROKR1Q8TCW9 393 aa13.63□□□□□ -0.23
VAMP4-203ENST00000474047 ATL1Q8WXF7 558 aa13.63□□□□□ -0.23
VAMP4-203ENST00000474047 RERGQ96A58 199 aaPredicted RBP13.63□□□□□ -0.23
VAMP4-203ENST00000474047 PDLIM5Q96HC4 596 aaKnown RBP13.63□□□□□ -0.23
VAMP4-203ENST00000474047 BBC3Q96PG8 261 aaPredicted RBP13.63□□□□□ -0.23
VAMP4-203ENST00000474047 RBBP8Q99708 897 aa13.63□□□□□ -0.23
VAMP4-203ENST00000474047 ZFYVE21Q9BQ24 234 aa13.63□□□□□ -0.23
VAMP4-203ENST00000474047 PLCD4Q9BRC7 762 aa13.63□□□□□ -0.23
VAMP4-203ENST00000474047 SLC6A20Q9NP91 592 aa13.63□□□□□ -0.23
VAMP4-203ENST00000474047 ZDHHC18Q9NUE0 388 aa13.63□□□□□ -0.23
VAMP4-203ENST00000474047 DMGDHQ9UI17 866 aaKnown RBP13.63□□□□□ -0.23
VAMP4-203ENST00000474047 PADI2Q9Y2J8 665 aa13.63□□□□□ -0.23
VAMP4-203ENST00000474047 MTO1Q9Y2Z2 717 aaKnown RBP13.63□□□□□ -0.23
VAMP4-203ENST00000474047 KLK4Q9Y5K2 254 aa13.63□□□□□ -0.23
VAMP4-203ENST00000474047 ANKRD12Q6UB98 2062 aa13.63□□□□□ -0.23
VAMP4-203ENST00000474047 NBEAQ8NFP9 2946 aa13.63□□□□□ -0.23
VAMP4-203ENST00000474047 TERTO14746 1132 aaKnown RBP13.62□□□□□ -0.23
VAMP4-203ENST00000474047 TSPAN12O95859 305 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms