RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 SLC6A20Q9NP91 592 aa12.62□□□□□ -0.39
TPM3-216ENST00000473036 FGF21Q9NSA1 209 aa12.62□□□□□ -0.39
TPM3-216ENST00000473036 STOX2Q9P2F5 926 aaPredicted RBP12.62□□□□□ -0.39
TPM3-216ENST00000473036 TXNDC16Q9P2K2 825 aa12.62□□□□□ -0.39
TPM3-216ENST00000473036 SH2B3Q9UQQ2 575 aa12.62□□□□□ -0.39
TPM3-216ENST00000473036 IKBKGQ9Y6K9 419 aa12.62□□□□□ -0.39
TPM3-216ENST00000473036 NPEPPSL1A6NEC2 478 aa12.61□□□□□ -0.39
TPM3-216ENST00000473036 SLC16A5O15375 505 aa12.61□□□□□ -0.39
TPM3-216ENST00000473036 RIPK2O43353 540 aa12.61□□□□□ -0.39
TPM3-216ENST00000473036 ATP8B1O43520 1251 aa12.61□□□□□ -0.39
TPM3-216ENST00000473036 ZBTB14O43829 449 aa12.61□□□□□ -0.39
TPM3-216ENST00000473036 CTSVO60911 334 aa12.61□□□□□ -0.39
TPM3-216ENST00000473036 SYF2O95926 243 aaKnown RBP12.61□□□□□ -0.39
TPM3-216ENST00000473036 C8GP07360 202 aa12.61□□□□□ -0.39
TPM3-216ENST00000473036 SLC35E2BP0CK96 405 aa12.61□□□□□ -0.39
TPM3-216ENST00000473036 OAS2P29728 719 aaKnown RBP12.61□□□□□ -0.39
TPM3-216ENST00000473036 SPRP35270 261 aaPredicted RBP12.61□□□□□ -0.39
TPM3-216ENST00000473036 GRIA3P42263 894 aa12.61□□□□□ -0.39
TPM3-216ENST00000473036 KCNC1P48547 511 aa12.61□□□□□ -0.39
TPM3-216ENST00000473036 RGS4P49798 205 aa12.61□□□□□ -0.39
TPM3-216ENST00000473036 RAB15P59190 212 aa12.61□□□□□ -0.39
TPM3-216ENST00000473036 TUBB3Q13509 450 aa12.61□□□□□ -0.39
TPM3-216ENST00000473036 LY6DQ14210 128 aa12.61□□□□□ -0.39
TPM3-216ENST00000473036 OR4D1Q15615 310 aa12.61□□□□□ -0.39
TPM3-216ENST00000473036 SF1Q15637 639 aaKnown RBP12.61□□□□□ -0.39
TPM3-216ENST00000473036 BEND6Q5SZJ8 279 aaPredicted RBP12.61□□□□□ -0.39
TPM3-216ENST00000473036 TTC23LQ6PF05 361 aa12.61□□□□□ -0.39
TPM3-216ENST00000473036 CEACAM20Q6UY09 585 aa12.61□□□□□ -0.39
TPM3-216ENST00000473036 MYO1HQ8N1T3 1032 aa12.61□□□□□ -0.39
TPM3-216ENST00000473036 DNAJC22Q8N4W6 341 aa12.61□□□□□ -0.39
TPM3-216ENST00000473036 OR2L3Q8NG85 312 aa12.61□□□□□ -0.39
TPM3-216ENST00000473036 MAGEC3Q8TD91 643 aa12.61□□□□□ -0.39
TPM3-216ENST00000473036 DCAKDQ8WVC6 231 aa12.61□□□□□ -0.39
TPM3-216ENST00000473036 SLC44A1Q8WWI5 657 aa12.61□□□□□ -0.39
TPM3-216ENST00000473036 PTERQ96BW5 349 aa12.61□□□□□ -0.39
TPM3-216ENST00000473036 UBXN10Q96LJ8 280 aa12.61□□□□□ -0.39
TPM3-216ENST00000473036 FCRL4Q96PJ5 515 aa12.61□□□□□ -0.39
TPM3-216ENST00000473036 ACAT2Q9BWD1 397 aa12.61□□□□□ -0.39
TPM3-216ENST00000473036 ROPN1BQ9BZX4 212 aaPredicted RBP12.61□□□□□ -0.39
TPM3-216ENST00000473036 CHRNA10Q9GZZ6 450 aa12.61□□□□□ -0.39
TPM3-216ENST00000473036 VIPAS39Q9H9C1 493 aa12.61□□□□□ -0.39
TPM3-216ENST00000473036 ROPN1Q9HAT0 212 aaPredicted RBP12.61□□□□□ -0.39
TPM3-216ENST00000473036 POPDC3Q9HBV1 291 aa12.61□□□□□ -0.39
TPM3-216ENST00000473036 GPAMQ9HCL2 828 aa12.61□□□□□ -0.39
TPM3-216ENST00000473036 SOHLH2Q9NX45 425 aa12.61□□□□□ -0.39
TPM3-216ENST00000473036 TMEM184BQ9Y519 407 aaPredicted RBP12.61□□□□□ -0.39
TPM3-216ENST00000473036 KLK4Q9Y5K2 254 aa12.61□□□□□ -0.39
TPM3-216ENST00000473036 STK17BO94768 372 aa12.6□□□□□ -0.39
TPM3-216ENST00000473036 ALDOAP04075 364 aaKnown RBP12.6□□□□□ -0.39
TPM3-216ENST00000473036 ITGB2P05107 769 aa12.6□□□□□ -0.39
TPM3-216ENST00000473036 NUDT17P0C025 328 aa12.6□□□□□ -0.39
TPM3-216ENST00000473036 MSL3P1P0C860 447 aa12.6□□□□□ -0.39
TPM3-216ENST00000473036 CCDC166P0CW27 439 aa12.6□□□□□ -0.39
TPM3-216ENST00000473036 CD1DP15813 335 aa12.6□□□□□ -0.39
TPM3-216ENST00000473036 RAB10P61026 200 aa12.6□□□□□ -0.39
TPM3-216ENST00000473036 IRF9Q00978 393 aa12.6□□□□□ -0.39
TPM3-216ENST00000473036 SP140Q13342 867 aa12.6□□□□□ -0.39
TPM3-216ENST00000473036 IL11RAQ14626 422 aa12.6□□□□□ -0.39
TPM3-216ENST00000473036 ARHGAP19Q14CB8 494 aa12.6□□□□□ -0.39
TPM3-216ENST00000473036 TSNQ15631 228 aaKnown RBP12.6□□□□□ -0.39
TPM3-216ENST00000473036 UAP1Q16222 522 aaPredicted RBP12.6□□□□□ -0.39
TPM3-216ENST00000473036 C18orf21Q32NC0 220 aaPredicted RBP12.6□□□□□ -0.39
TPM3-216ENST00000473036 MROH9Q5TGP6 573 aa12.6□□□□□ -0.39
TPM3-216ENST00000473036 LRRC8EQ6NSJ5 796 aa12.6□□□□□ -0.39
TPM3-216ENST00000473036 FIGLAQ6QHK4 219 aa12.6□□□□□ -0.39
TPM3-216ENST00000473036 TAOK1Q7L7X3 1001 aa12.6□□□□□ -0.39
TPM3-216ENST00000473036 CENPLQ8N0S6 344 aaPredicted RBP12.6□□□□□ -0.39
TPM3-216ENST00000473036 NKD1Q969G9 470 aa12.6□□□□□ -0.39
TPM3-216ENST00000473036 CCNL2Q96S94 520 aaPredicted RBP12.6□□□□□ -0.39
TPM3-216ENST00000473036 PAFAH2Q99487 392 aa12.6□□□□□ -0.39
TPM3-216ENST00000473036 DHRS4Q9BTZ2 278 aa12.6□□□□□ -0.39
TPM3-216ENST00000473036 RAB11FIP5Q9BXF6 653 aa12.6□□□□□ -0.39
TPM3-216ENST00000473036 ASPSCR1Q9BZE9 553 aa12.6□□□□□ -0.39
TPM3-216ENST00000473036 FAM117AQ9C073 453 aa12.6□□□□□ -0.39
TPM3-216ENST00000473036 DERL2Q9GZP9 239 aa12.6□□□□□ -0.39
TPM3-216ENST00000473036 SPRTNQ9H040 489 aaPredicted RBP12.6□□□□□ -0.39
TPM3-216ENST00000473036 ATG10Q9H0Y0 220 aa12.6□□□□□ -0.39
TPM3-216ENST00000473036 PDE7BQ9NP56 450 aa12.6□□□□□ -0.39
TPM3-216ENST00000473036 IGSF5Q9NSI5 407 aa12.6□□□□□ -0.39
TPM3-216ENST00000473036 IL17BQ9UHF5 180 aa12.6□□□□□ -0.39
TPM3-216ENST00000473036 LNPEPQ9UIQ6 1025 aa12.6□□□□□ -0.39
TPM3-216ENST00000473036 HEMK1Q9Y5R4 338 aaPredicted RBP12.6□□□□□ -0.39
TPM3-216ENST00000473036 CCDC88CQ9P219 2028 aa12.59□□□□□ -0.39
TPM3-216ENST00000473036 TMEM150CB9EJG8 249 aa12.59□□□□□ -0.39
TPM3-216ENST00000473036 KDM1AO60341 852 aa12.59□□□□□ -0.39
TPM3-216ENST00000473036 KIAA0754O94854 1291 aa12.59□□□□□ -0.39
TPM3-216ENST00000473036 NTRK1P04629 796 aa12.59□□□□□ -0.39
TPM3-216ENST00000473036 LIPCP11150 499 aa12.59□□□□□ -0.39
TPM3-216ENST00000473036 STMN1P16949 149 aa12.59□□□□□ -0.39
TPM3-216ENST00000473036 CYP2A7P20853 494 aa12.59□□□□□ -0.39
TPM3-216ENST00000473036 F8A1P23610 371 aa12.59□□□□□ -0.39
TPM3-216ENST00000473036 CNTFP26441 200 aa12.59□□□□□ -0.39
TPM3-216ENST00000473036 MAP4P27816 1152 aaKnown RBP12.59□□□□□ -0.39
TPM3-216ENST00000473036 HSD17B3P37058 310 aa12.59□□□□□ -0.39
TPM3-216ENST00000473036 MAGEA12P43365 314 aa12.59□□□□□ -0.39
TPM3-216ENST00000473036 GCGRP47871 477 aa12.59□□□□□ -0.39
TPM3-216ENST00000473036 TBPL1P62380 186 aa12.59□□□□□ -0.39
TPM3-216ENST00000473036 ACY1Q03154 408 aa12.59□□□□□ -0.39
TPM3-216ENST00000473036 IFFO1Q0D2I5 559 aa12.59□□□□□ -0.39
TPM3-216ENST00000473036 SLC29A2Q14542 456 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms