RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 AGAP11Q8TF27 550 aa18.03■□□□□ 0.48
NCKIPSD-209ENST00000470006 THAP3Q8WTV1 239 aaPredicted RBP18.03■□□□□ 0.48
NCKIPSD-209ENST00000470006 IQCDQ96DY2 449 aa18.03■□□□□ 0.48
NCKIPSD-209ENST00000470006 CDKN2AIPNLQ96HQ2 116 aa18.03■□□□□ 0.48
NCKIPSD-209ENST00000470006 NLE1Q9NVX2 485 aaPredicted RBP18.03■□□□□ 0.48
NCKIPSD-209ENST00000470006 COQ3Q9NZJ6 369 aa18.03■□□□□ 0.48
NCKIPSD-209ENST00000470006 CDC14AQ9UNH5 594 aa18.03■□□□□ 0.48
NCKIPSD-209ENST00000470006 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.03■□□□□ 0.48
NCKIPSD-209ENST00000470006 MACROD2A1Z1Q3 448 aa18.02■□□□□ 0.48
NCKIPSD-209ENST00000470006 TARM1B6A8C7 271 aa18.02■□□□□ 0.48
NCKIPSD-209ENST00000470006 H7C0S8 307 aa18.02■□□□□ 0.48
NCKIPSD-209ENST00000470006 RASGRF2O14827 1237 aa18.02■□□□□ 0.48
NCKIPSD-209ENST00000470006 ZNHIT1O43257 154 aa18.02■□□□□ 0.48
NCKIPSD-209ENST00000470006 UBASH3AP57075 661 aa18.02■□□□□ 0.48
NCKIPSD-209ENST00000470006 ITIH4Q14624 930 aa18.02■□□□□ 0.48
NCKIPSD-209ENST00000470006 TTC23LQ6PF05 361 aa18.02■□□□□ 0.48
NCKIPSD-209ENST00000470006 Q6ZPB1 254 aaPredicted RBP18.02■□□□□ 0.48
NCKIPSD-209ENST00000470006 TMEM200AQ86VY9 491 aa18.02■□□□□ 0.48
NCKIPSD-209ENST00000470006 DCUN1D3Q8IWE4 304 aa18.02■□□□□ 0.48
NCKIPSD-209ENST00000470006 AMER2Q8N7J2 671 aa18.02■□□□□ 0.48
NCKIPSD-209ENST00000470006 MIPEPQ99797 713 aa18.02■□□□□ 0.48
NCKIPSD-209ENST00000470006 HEMGNQ9BXL5 484 aa18.02■□□□□ 0.48
NCKIPSD-209ENST00000470006 ZNF700Q9H0M5 742 aa18.02■□□□□ 0.48
NCKIPSD-209ENST00000470006 FEZ2Q9UHY8 353 aaPredicted RBP18.02■□□□□ 0.48
NCKIPSD-209ENST00000470006 PPT2Q9UMR5 302 aa18.02■□□□□ 0.48
NCKIPSD-209ENST00000470006 hCG_1818297A0A087WSY0 165 aa18.01■□□□□ 0.47
NCKIPSD-209ENST00000470006 A0A1B0GTL3 188 aa18.01■□□□□ 0.47
NCKIPSD-209ENST00000470006 RCCD1A6NED2 376 aa18.01■□□□□ 0.47
NCKIPSD-209ENST00000470006 F8W8V4 182 aa18.01■□□□□ 0.47
NCKIPSD-209ENST00000470006 PRPF4O43172 522 aaKnown RBP eCLIP18.01■□□□□ 0.47
NCKIPSD-209ENST00000470006 ZRANB2O95218 330 aaKnown RBP eCLIP18.01■□□□□ 0.47
NCKIPSD-209ENST00000470006 GYPCP04921 128 aa18.01■□□□□ 0.47
NCKIPSD-209ENST00000470006 ANXA5P08758 320 aa18.01■□□□□ 0.47
NCKIPSD-209ENST00000470006 MSNP26038 577 aaKnown RBP18.01■□□□□ 0.47
NCKIPSD-209ENST00000470006 EEF1DP29692 281 aaKnown RBP18.01■□□□□ 0.47
NCKIPSD-209ENST00000470006 FCRLBQ6BAA4 426 aa18.01■□□□□ 0.47
NCKIPSD-209ENST00000470006 DENND5AQ6IQ26 1287 aa18.01■□□□□ 0.47
NCKIPSD-209ENST00000470006 EID3Q8N140 333 aa18.01■□□□□ 0.47
NCKIPSD-209ENST00000470006 DNAAF3Q8N9W5 541 aa18.01■□□□□ 0.47
NCKIPSD-209ENST00000470006 MMABQ96EY8 250 aaPredicted RBP18.01■□□□□ 0.47
NCKIPSD-209ENST00000470006 C14orf105Q9NVL8 296 aa18.01■□□□□ 0.47
NCKIPSD-209ENST00000470006 SCN2AQ99250 2005 aa18■□□□□ 0.47
NCKIPSD-209ENST00000470006 IGLV3-12A0A075B6K2 115 aa18■□□□□ 0.47
NCKIPSD-209ENST00000470006 OR51F1A6NGY5 319 aa18■□□□□ 0.47
NCKIPSD-209ENST00000470006 PSTPIP1O43586 416 aa18■□□□□ 0.47
NCKIPSD-209ENST00000470006 FKBP9O95302 570 aa18■□□□□ 0.47
NCKIPSD-209ENST00000470006 TSPAN12O95859 305 aa18■□□□□ 0.47
NCKIPSD-209ENST00000470006 CTNNA2P26232 953 aa18■□□□□ 0.47
NCKIPSD-209ENST00000470006 PSMB5P28074 263 aa18■□□□□ 0.47
NCKIPSD-209ENST00000470006 ST13P50502 369 aaKnown RBP18■□□□□ 0.47
NCKIPSD-209ENST00000470006 TPM4P67936 248 aa18■□□□□ 0.47
NCKIPSD-209ENST00000470006 POU6F1Q14863 301 aa18■□□□□ 0.47
NCKIPSD-209ENST00000470006 PCOLCEQ15113 449 aa18■□□□□ 0.47
NCKIPSD-209ENST00000470006 PACS1Q6VY07 963 aa18■□□□□ 0.47
NCKIPSD-209ENST00000470006 VRK3Q8IV63 474 aa18■□□□□ 0.47
NCKIPSD-209ENST00000470006 RCOR2Q8IZ40 523 aa18■□□□□ 0.47
NCKIPSD-209ENST00000470006 SLC22A15Q8IZD6 547 aa18■□□□□ 0.47
NCKIPSD-209ENST00000470006 BEST3Q8N1M1 668 aa18■□□□□ 0.47
NCKIPSD-209ENST00000470006 RAB42Q8N4Z0 105 aa18■□□□□ 0.47
NCKIPSD-209ENST00000470006 TAB3Q8N5C8 712 aaPredicted RBP18■□□□□ 0.47
NCKIPSD-209ENST00000470006 STYXQ8WUJ0 223 aa18■□□□□ 0.47
NCKIPSD-209ENST00000470006 METTL21AQ8WXB1 218 aa18■□□□□ 0.47
NCKIPSD-209ENST00000470006 ZNF354BQ96LW1 612 aa18■□□□□ 0.47
NCKIPSD-209ENST00000470006 PPP1R2P1Q96PQ5 205 aa18■□□□□ 0.47
NCKIPSD-209ENST00000470006 TUBB6Q9BUF5 446 aa18■□□□□ 0.47
NCKIPSD-209ENST00000470006 MENTQ9BUN1 341 aa18■□□□□ 0.47
NCKIPSD-209ENST00000470006 TMUB1Q9BVT8 246 aa18■□□□□ 0.47
NCKIPSD-209ENST00000470006 RAB11FIP5Q9BXF6 653 aa18■□□□□ 0.47
NCKIPSD-209ENST00000470006 ENAMQ9NRM1 1142 aa18■□□□□ 0.47
NCKIPSD-209ENST00000470006 ANKRD10Q9NXR5 420 aa18■□□□□ 0.47
NCKIPSD-209ENST00000470006 MKL2Q9ULH7 1088 aa18■□□□□ 0.47
NCKIPSD-209ENST00000470006 INTS1Q8N201 2190 aaKnown RBP17.99■□□□□ 0.47
NCKIPSD-209ENST00000470006 PRRG2O14669 202 aa17.99■□□□□ 0.47
NCKIPSD-209ENST00000470006 OR1I1O60431 355 aa17.99■□□□□ 0.47
NCKIPSD-209ENST00000470006 DRD2P14416 443 aa17.99■□□□□ 0.47
NCKIPSD-209ENST00000470006 CD46P15529 392 aa17.99■□□□□ 0.47
NCKIPSD-209ENST00000470006 PPP2R2AP63151 447 aa17.99■□□□□ 0.47
NCKIPSD-209ENST00000470006 DSG2Q14126 1118 aa17.99■□□□□ 0.47
NCKIPSD-209ENST00000470006 MFSD4BQ5TF39 518 aa17.99■□□□□ 0.47
NCKIPSD-209ENST00000470006 DARS2Q6PI48 645 aaKnown RBP17.99■□□□□ 0.47
NCKIPSD-209ENST00000470006 CDKL3Q8IVW4 592 aaPredicted RBP17.99■□□□□ 0.47
NCKIPSD-209ENST00000470006 GSDMBQ8TAX9 411 aa17.99■□□□□ 0.47
NCKIPSD-209ENST00000470006 SKA2Q8WVK7 121 aaPredicted RBP17.99■□□□□ 0.47
NCKIPSD-209ENST00000470006 ASZ1Q8WWH4 475 aa17.99■□□□□ 0.47
NCKIPSD-209ENST00000470006 C10orf90Q96M02 699 aa17.99■□□□□ 0.47
NCKIPSD-209ENST00000470006 TTC1Q99614 292 aa17.99■□□□□ 0.47
NCKIPSD-209ENST00000470006 UTP23Q9BRU9 249 aaKnown RBP17.99■□□□□ 0.47
NCKIPSD-209ENST00000470006 TMEM121Q9BTD3 319 aa17.99■□□□□ 0.47
NCKIPSD-209ENST00000470006 TSSK1BQ9BXA7 367 aa17.99■□□□□ 0.47
NCKIPSD-209ENST00000470006 HES7Q9BYE0 225 aa17.99■□□□□ 0.47
NCKIPSD-209ENST00000470006 ARNT2Q9HBZ2 717 aa17.99■□□□□ 0.47
NCKIPSD-209ENST00000470006 MKKSQ9NPJ1 570 aaPredicted RBP17.99■□□□□ 0.47
NCKIPSD-209ENST00000470006 A0A1W2PQ72 361 aa17.98■□□□□ 0.47
NCKIPSD-209ENST00000470006 E9PLN8 166 aa17.98■□□□□ 0.47
NCKIPSD-209ENST00000470006 ASNA1O43681 348 aa17.98■□□□□ 0.47
NCKIPSD-209ENST00000470006 NRP2O60462 931 aa17.98■□□□□ 0.47
NCKIPSD-209ENST00000470006 SEC24DO94855 1032 aaPredicted RBP17.98■□□□□ 0.47
NCKIPSD-209ENST00000470006 C8orf89P0DMQ9 161 aa17.98■□□□□ 0.47
NCKIPSD-209ENST00000470006 CCR7P32248 378 aa17.98■□□□□ 0.47
NCKIPSD-209ENST00000470006 HSF1Q00613 529 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms