RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 AGPAT4Q9NRZ5 378 aa20.13■□□□□ 0.81
COL9A3-207ENST00000467819 SEMA3GQ9NS98 782 aa20.13■□□□□ 0.81
COL9A3-207ENST00000467819 SYBUQ9NX95 663 aa20.13■□□□□ 0.81
COL9A3-207ENST00000467819 IL1RAPL1Q9NZN1 696 aa20.13■□□□□ 0.81
COL9A3-207ENST00000467819 STOX2Q9P2F5 926 aaPredicted RBP20.13■□□□□ 0.81
COL9A3-207ENST00000467819 LOC105369274A0A096LPK9 316 aa20.12■□□□□ 0.81
COL9A3-207ENST00000467819 LOC102723532A0A0G2JNH3 316 aa20.12■□□□□ 0.81
COL9A3-207ENST00000467819 CLDN1O95832 211 aa20.12■□□□□ 0.81
COL9A3-207ENST00000467819 ARNTP27540 789 aa20.12■□□□□ 0.81
COL9A3-207ENST00000467819 TERF1P54274 439 aa20.12■□□□□ 0.81
COL9A3-207ENST00000467819 RNF44Q7L0R7 432 aa20.12■□□□□ 0.81
COL9A3-207ENST00000467819 OR4N4Q8N0Y3 316 aa20.12■□□□□ 0.81
COL9A3-207ENST00000467819 OR2A1Q8NGT9 310 aa20.12■□□□□ 0.81
COL9A3-207ENST00000467819 DNAJB14Q8TBM8 379 aa20.12■□□□□ 0.81
COL9A3-207ENST00000467819 THOC3Q96J01 351 aaKnown RBP20.12■□□□□ 0.81
COL9A3-207ENST00000467819 VPS50Q96JG6 964 aa20.12■□□□□ 0.81
COL9A3-207ENST00000467819 BIRC8Q96P09 236 aa20.12■□□□□ 0.81
COL9A3-207ENST00000467819 LHPPQ9H008 270 aa20.12■□□□□ 0.81
COL9A3-207ENST00000467819 ENAMQ9NRM1 1142 aa20.12■□□□□ 0.81
COL9A3-207ENST00000467819 SPATA7Q9P0W8 599 aa20.12■□□□□ 0.81
COL9A3-207ENST00000467819 KLK4Q9Y5K2 254 aa20.12■□□□□ 0.81
COL9A3-207ENST00000467819 WIPF3A6NGB9 483 aa20.11■□□□□ 0.81
COL9A3-207ENST00000467819 VSTM2BA6NLU5 285 aa20.11■□□□□ 0.81
COL9A3-207ENST00000467819 AP3B1O00203 1094 aa20.11■□□□□ 0.81
COL9A3-207ENST00000467819 ERVK-10P10266 1014 aa20.11■□□□□ 0.81
COL9A3-207ENST00000467819 KCNJ1P48048 391 aa20.11■□□□□ 0.81
COL9A3-207ENST00000467819 OCA2Q04671 838 aa20.11■□□□□ 0.81
COL9A3-207ENST00000467819 KLC1Q07866 573 aa20.11■□□□□ 0.81
COL9A3-207ENST00000467819 Q0VFX4 171 aa20.11■□□□□ 0.81
COL9A3-207ENST00000467819 ZNF787Q6DD87 383 aa20.11■□□□□ 0.81
COL9A3-207ENST00000467819 MRNIPQ6NTE8 343 aa20.11■□□□□ 0.81
COL9A3-207ENST00000467819 DRICH1Q6PGQ1 229 aaPredicted RBP20.11■□□□□ 0.81
COL9A3-207ENST00000467819 IGFL2Q6UWQ7 119 aa20.11■□□□□ 0.81
COL9A3-207ENST00000467819 C4orf22Q6V702 233 aa20.11■□□□□ 0.81
COL9A3-207ENST00000467819 SDCCAG8Q86SQ7 713 aaPredicted RBP20.11■□□□□ 0.81
COL9A3-207ENST00000467819 STT3BQ8TCJ2 826 aa20.11■□□□□ 0.81
COL9A3-207ENST00000467819 MAGEC3Q8TD91 643 aa20.11■□□□□ 0.81
COL9A3-207ENST00000467819 LPGAT1Q92604 370 aa20.11■□□□□ 0.81
COL9A3-207ENST00000467819 MIEF2Q96C03 454 aa20.11■□□□□ 0.81
COL9A3-207ENST00000467819 BARD1Q99728 777 aaKnown RBP20.11■□□□□ 0.81
COL9A3-207ENST00000467819 EPS8L2Q9H6S3 715 aa20.11■□□□□ 0.81
COL9A3-207ENST00000467819 DRG1Q9Y295 367 aaKnown RBP20.11■□□□□ 0.81
COL9A3-207ENST00000467819 CROCCQ5TZA2 2017 aa20.1■□□□□ 0.81
COL9A3-207ENST00000467819 CMPK1P30085 196 aa20.1■□□□□ 0.81
COL9A3-207ENST00000467819 CARSP49589 748 aaKnown RBP20.1■□□□□ 0.81
COL9A3-207ENST00000467819 CDC16Q13042 620 aa20.1■□□□□ 0.81
COL9A3-207ENST00000467819 TSTA3Q13630 321 aaPredicted RBP20.1■□□□□ 0.81
COL9A3-207ENST00000467819 ZNF169Q14929 603 aaPredicted RBP20.1■□□□□ 0.81
COL9A3-207ENST00000467819 LINC00696Q6ZRV3 163 aa20.1■□□□□ 0.81
COL9A3-207ENST00000467819 C8orf44Q96CB5 159 aa20.1■□□□□ 0.81
COL9A3-207ENST00000467819 CABS1Q96KC9 395 aa20.1■□□□□ 0.81
COL9A3-207ENST00000467819 ZFYVE21Q9BQ24 234 aa20.1■□□□□ 0.81
COL9A3-207ENST00000467819 DPH7Q9BTV6 452 aa20.1■□□□□ 0.81
COL9A3-207ENST00000467819 KIFC1Q9BW19 673 aa20.1■□□□□ 0.81
COL9A3-207ENST00000467819 ZNF160Q9HCG1 818 aa20.1■□□□□ 0.81
COL9A3-207ENST00000467819 ZNF282Q9UDV7 671 aaPredicted RBP20.1■□□□□ 0.81
COL9A3-207ENST00000467819 C3orf18Q9UK00 162 aa20.1■□□□□ 0.81
COL9A3-207ENST00000467819 CRYL1Q9Y2S2 319 aa20.1■□□□□ 0.81
COL9A3-207ENST00000467819 CELSR2Q9HCU4 2923 aa20.1■□□□□ 0.81
COL9A3-207ENST00000467819 CREBBPQ92793 2442 aa20.1■□□□□ 0.81
COL9A3-207ENST00000467819 TCRBV7S3A2A0A539 114 aa20.09■□□□□ 0.81
COL9A3-207ENST00000467819 OR2A25A4D2G3 310 aa20.09■□□□□ 0.81
COL9A3-207ENST00000467819 ARHGEF33A8MVX0 844 aa20.09■□□□□ 0.81
COL9A3-207ENST00000467819 MAP2K7O14733 419 aa20.09■□□□□ 0.81
COL9A3-207ENST00000467819 MATN4O95460 622 aa20.09■□□□□ 0.81
COL9A3-207ENST00000467819 FGGP02679 453 aa20.09■□□□□ 0.81
COL9A3-207ENST00000467819 ZGLP1P0C6A0 271 aa20.09■□□□□ 0.81
COL9A3-207ENST00000467819 ACPPP15309 386 aa20.09■□□□□ 0.81
COL9A3-207ENST00000467819 CHRM3P20309 590 aa20.09■□□□□ 0.81
COL9A3-207ENST00000467819 FBLP22087 321 aaKnown RBP20.09■□□□□ 0.81
COL9A3-207ENST00000467819 GBX1Q14549 363 aa20.09■□□□□ 0.81
COL9A3-207ENST00000467819 TYSND1Q2T9J0 566 aa20.09■□□□□ 0.81
COL9A3-207ENST00000467819 MUM1Q2TAK8 710 aa20.09■□□□□ 0.81
COL9A3-207ENST00000467819 ACSBG2Q5FVE4 666 aa20.09■□□□□ 0.81
COL9A3-207ENST00000467819 EEF1AKMT2Q5JPI9 291 aaKnown RBP20.09■□□□□ 0.81
COL9A3-207ENST00000467819 RNF187Q5TA31 235 aaPredicted RBP20.09■□□□□ 0.81
COL9A3-207ENST00000467819 PRMT9Q6P2P2 845 aa20.09■□□□□ 0.81
COL9A3-207ENST00000467819 LRRC8BQ6P9F7 803 aa20.09■□□□□ 0.81
COL9A3-207ENST00000467819 SUSD1Q6UWL2 747 aa20.09■□□□□ 0.81
COL9A3-207ENST00000467819 KCNMB4Q86W47 210 aa20.09■□□□□ 0.81
COL9A3-207ENST00000467819 ST6GALNAC3Q8NDV1 305 aa20.09■□□□□ 0.81
COL9A3-207ENST00000467819 OR9A1PQ8NGU1 263 aa20.09■□□□□ 0.81
COL9A3-207ENST00000467819 GRHL3Q8TE85 626 aa20.09■□□□□ 0.81
COL9A3-207ENST00000467819 C10orf90Q96M02 699 aa20.09■□□□□ 0.81
COL9A3-207ENST00000467819 GALPQ9UBC7 116 aa20.09■□□□□ 0.81
COL9A3-207ENST00000467819 SOX13Q9UN79 622 aa20.09■□□□□ 0.81
COL9A3-207ENST00000467819 GOLGA6L6A8MZA4 724 aa20.08■□□□□ 0.81
COL9A3-207ENST00000467819 H0YGG7 62 aa20.08■□□□□ 0.81
COL9A3-207ENST00000467819 H3BMM5 538 aa20.08■□□□□ 0.81
COL9A3-207ENST00000467819 FFAR3O14843 346 aa20.08■□□□□ 0.81
COL9A3-207ENST00000467819 PFDN6O15212 129 aa20.08■□□□□ 0.81
COL9A3-207ENST00000467819 GPR42O15529 346 aa20.08■□□□□ 0.81
COL9A3-207ENST00000467819 HPP00738 406 aa20.08■□□□□ 0.81
COL9A3-207ENST00000467819 ESR1P03372 595 aa20.08■□□□□ 0.81
COL9A3-207ENST00000467819 TPSB2P20231 275 aa20.08■□□□□ 0.81
COL9A3-207ENST00000467819 ATP5DP30049 168 aa20.08■□□□□ 0.81
COL9A3-207ENST00000467819 RPA3P35244 121 aaPredicted RBP20.08■□□□□ 0.81
COL9A3-207ENST00000467819 TSFMP43897 325 aaKnown RBP20.08■□□□□ 0.81
COL9A3-207ENST00000467819 ARF3P61204 181 aaPredicted RBP20.08■□□□□ 0.81
COL9A3-207ENST00000467819 NAA25Q14CX7 972 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms