RNA–Protein interactions for RNA: ENST00000467733.1

SSR3-204, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 873 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-204ENST00000467733 RPL34P49207 117 aaKnown RBP4.07□□□□□ -1.76
SSR3-204ENST00000467733 DNA2P51530 1060 aa4.07□□□□□ -1.76
SSR3-204ENST00000467733 UCP3P55916 312 aa4.07□□□□□ -1.76
SSR3-204ENST00000467733 WNT3P56703 355 aa4.07□□□□□ -1.76
SSR3-204ENST00000467733 SLC20A2Q08357 652 aa4.07□□□□□ -1.76
SSR3-204ENST00000467733 BIRC2Q13490 618 aa4.07□□□□□ -1.76
SSR3-204ENST00000467733 CUL2Q13617 745 aa4.07□□□□□ -1.76
SSR3-204ENST00000467733 RAPGEF1Q13905 1077 aa4.07□□□□□ -1.76
SSR3-204ENST00000467733 E2F2Q14209 437 aa4.07□□□□□ -1.76
SSR3-204ENST00000467733 CNN3Q15417 329 aaKnown RBP4.07□□□□□ -1.76
SSR3-204ENST00000467733 TMEM52BQ4KMG9 183 aa4.07□□□□□ -1.76
SSR3-204ENST00000467733 ALFQ53S48 1182 aa4.07□□□□□ -1.76
SSR3-204ENST00000467733 NKAIN2Q5VXU1 208 aa4.07□□□□□ -1.76
SSR3-204ENST00000467733 KRT39Q6A163 491 aa4.07□□□□□ -1.76
SSR3-204ENST00000467733 ANKRD40Q6AI12 368 aa4.07□□□□□ -1.76
SSR3-204ENST00000467733 SLC9A4Q6AI14 798 aa4.07□□□□□ -1.76
SSR3-204ENST00000467733 TMEM71Q6P5X7 295 aa4.07□□□□□ -1.76
SSR3-204ENST00000467733 DARS2Q6PI48 645 aaKnown RBP4.07□□□□□ -1.76
SSR3-204ENST00000467733 ARHGAP22Q7Z5H3 698 aa4.07□□□□□ -1.76
SSR3-204ENST00000467733 TFAP2DQ7Z6R9 452 aa4.07□□□□□ -1.76
SSR3-204ENST00000467733 SLC47A2Q86VL8 602 aa4.07□□□□□ -1.76
SSR3-204ENST00000467733 ZNF683Q8IZ20 524 aa4.07□□□□□ -1.76
SSR3-204ENST00000467733 IQCKQ8N0W5 287 aa4.07□□□□□ -1.76
SSR3-204ENST00000467733 SLC15A4Q8N697 577 aa4.07□□□□□ -1.76
SSR3-204ENST00000467733 IQUBQ8NA54 791 aa4.07□□□□□ -1.76
SSR3-204ENST00000467733 OR6K2Q8NGY2 324 aa4.07□□□□□ -1.76
SSR3-204ENST00000467733 CCL4L1Q8NHW4 92 aa4.07□□□□□ -1.76
SSR3-204ENST00000467733 SPATA3Q8NHX4 192 aa4.07□□□□□ -1.76
SSR3-204ENST00000467733 DHX58Q96C10 678 aa4.07□□□□□ -1.76
SSR3-204ENST00000467733 SNRNP40Q96DI7 357 aaKnown RBP4.07□□□□□ -1.76
SSR3-204ENST00000467733 STAMBPL1Q96FJ0 436 aa4.07□□□□□ -1.76
SSR3-204ENST00000467733 PBKQ96KB5 322 aa4.07□□□□□ -1.76
SSR3-204ENST00000467733 ADGRE3Q9BY15 652 aa4.07□□□□□ -1.76
SSR3-204ENST00000467733 TRIM54Q9BYV2 358 aa4.07□□□□□ -1.76
SSR3-204ENST00000467733 ULBP3Q9BZM4 244 aa4.07□□□□□ -1.76
SSR3-204ENST00000467733 AMBRA1Q9C0C7 1298 aa4.07□□□□□ -1.76
SSR3-204ENST00000467733 ZSCAN16Q9H4T2 348 aaPredicted RBP4.07□□□□□ -1.76
SSR3-204ENST00000467733 POPDC2Q9HBU9 364 aa4.07□□□□□ -1.76
SSR3-204ENST00000467733 SPATS2LQ9NUQ6 558 aaKnown RBP4.07□□□□□ -1.76
SSR3-204ENST00000467733 EXOC1Q9NV70 894 aa4.07□□□□□ -1.76
SSR3-204ENST00000467733 ASF1BQ9NVP2 202 aa4.07□□□□□ -1.76
SSR3-204ENST00000467733 DDIT4Q9NX09 232 aa4.07□□□□□ -1.76
SSR3-204ENST00000467733 RAB20Q9NX57 234 aa4.07□□□□□ -1.76
SSR3-204ENST00000467733 EHD3Q9NZN3 535 aa4.07□□□□□ -1.76
SSR3-204ENST00000467733 TAAR2Q9P1P5 351 aa4.07□□□□□ -1.76
SSR3-204ENST00000467733 TLN2Q9Y4G6 2542 aa4.07□□□□□ -1.76
SSR3-204ENST00000467733 MXRA5Q9NR99 2828 aa4.07□□□□□ -1.76
SSR3-204ENST00000467733 ANKRD12Q6UB98 2062 aa4.06□□□□□ -1.76
SSR3-204ENST00000467733 IGLV3-10A0A075B6K4 115 aa4.06□□□□□ -1.76
SSR3-204ENST00000467733 SYNJ2BP-COX16A0A087WUM0 186 aa4.06□□□□□ -1.76
SSR3-204ENST00000467733 ZSCAN5CA6NGD5 496 aaPredicted RBP4.06□□□□□ -1.76
SSR3-204ENST00000467733 LINC00473A8K010 186 aa4.06□□□□□ -1.76
SSR3-204ENST00000467733 ISM1B1AKI9 464 aa4.06□□□□□ -1.76
SSR3-204ENST00000467733 C21orf140B9A014 251 aa4.06□□□□□ -1.76
SSR3-204ENST00000467733 POLR1CO15160 346 aaPredicted RBP4.06□□□□□ -1.76
SSR3-204ENST00000467733 PPM1DO15297 605 aa4.06□□□□□ -1.76
SSR3-204ENST00000467733 FRS3O43559 492 aa4.06□□□□□ -1.76
SSR3-204ENST00000467733 KRT86O43790 486 aa4.06□□□□□ -1.76
SSR3-204ENST00000467733 CALUO43852 315 aaPredicted RBP4.06□□□□□ -1.76
SSR3-204ENST00000467733 STX10O60499 249 aa4.06□□□□□ -1.76
SSR3-204ENST00000467733 ZG16O60844 167 aa4.06□□□□□ -1.76
SSR3-204ENST00000467733 URI1O94763 535 aaPredicted RBP4.06□□□□□ -1.76
SSR3-204ENST00000467733 FGF1P05230 155 aa4.06□□□□□ -1.76
SSR3-204ENST00000467733 HOXC4P09017 264 aaPredicted RBP4.06□□□□□ -1.76
SSR3-204ENST00000467733 ZFXP17010 805 aaPredicted RBP4.06□□□□□ -1.76
SSR3-204ENST00000467733 NR2F2P24468 414 aa4.06□□□□□ -1.76
SSR3-204ENST00000467733 TBXAS1P24557 533 aaPredicted RBP4.06□□□□□ -1.76
SSR3-204ENST00000467733 CERS1P27544 350 aa4.06□□□□□ -1.76
SSR3-204ENST00000467733 PSMC2P35998 433 aaKnown RBP4.06□□□□□ -1.76
SSR3-204ENST00000467733 MMP12P39900 470 aa4.06□□□□□ -1.76
SSR3-204ENST00000467733 STAT1P42224 750 aa4.06□□□□□ -1.76
SSR3-204ENST00000467733 ACADSBP45954 432 aa4.06□□□□□ -1.76
SSR3-204ENST00000467733 ALDH9A1P49189 494 aa4.06□□□□□ -1.76
SSR3-204ENST00000467733 SUOXP51687 545 aa4.06□□□□□ -1.76
SSR3-204ENST00000467733 ARFIP2P53365 341 aa4.06□□□□□ -1.76
SSR3-204ENST00000467733 HDAC4P56524 1084 aa4.06□□□□□ -1.76
SSR3-204ENST00000467733 GEMIN4P57678 1058 aaKnown RBP4.06□□□□□ -1.76
SSR3-204ENST00000467733 SNRPD1P62314 119 aaKnown RBP4.06□□□□□ -1.76
SSR3-204ENST00000467733 YWHAZP63104 245 aaKnown RBP4.06□□□□□ -1.76
SSR3-204ENST00000467733 ARF5P84085 180 aa4.06□□□□□ -1.76
SSR3-204ENST00000467733 CDK18Q07002 472 aa4.06□□□□□ -1.76
SSR3-204ENST00000467733 ELP6Q0PNE2 266 aa4.06□□□□□ -1.76
SSR3-204ENST00000467733 ILF3Q12906 894 aaKnown RBP eCLIP4.06□□□□□ -1.76
SSR3-204ENST00000467733 STK4Q13043 487 aa4.06□□□□□ -1.76
SSR3-204ENST00000467733 CHAF1BQ13112 559 aa4.06□□□□□ -1.76
SSR3-204ENST00000467733 SLC13A2Q13183 592 aa4.06□□□□□ -1.76
SSR3-204ENST00000467733 PEX6Q13608 980 aa4.06□□□□□ -1.76
SSR3-204ENST00000467733 DNASE1L3Q13609 305 aa4.06□□□□□ -1.76
SSR3-204ENST00000467733 BMPR2Q13873 1038 aa4.06□□□□□ -1.76
SSR3-204ENST00000467733 KLF9Q13886 244 aaPredicted RBP4.06□□□□□ -1.76
SSR3-204ENST00000467733 GBX1Q14549 363 aa4.06□□□□□ -1.76
SSR3-204ENST00000467733 SLC39A14Q15043 492 aa4.06□□□□□ -1.76
SSR3-204ENST00000467733 TBCCQ15814 346 aa4.06□□□□□ -1.76
SSR3-204ENST00000467733 ETFDHQ16134 617 aa4.06□□□□□ -1.76
SSR3-204ENST00000467733 CNGA2Q16280 664 aa4.06□□□□□ -1.76
SSR3-204ENST00000467733 MEA1Q16626 185 aa4.06□□□□□ -1.76
SSR3-204ENST00000467733 NFIL3Q16649 462 aa4.06□□□□□ -1.76
SSR3-204ENST00000467733 WDR74Q6RFH5 385 aaPredicted RBP4.06□□□□□ -1.76
SSR3-204ENST00000467733 NRROSQ86YC3 692 aa4.06□□□□□ -1.76
SSR3-204ENST00000467733 NAGSQ8N159 534 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms