RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 C5orf30Q96GV9 206 aa3.89□□□□□ -1.79
SMC4-208ENST00000467468 TMEM19Q96HH6 336 aa3.89□□□□□ -1.79
SMC4-208ENST00000467468 SGK494Q96LW2 274 aa3.89□□□□□ -1.79
SMC4-208ENST00000467468 ZNF385AQ96PM9 386 aaKnown RBP3.89□□□□□ -1.79
SMC4-208ENST00000467468 PRAM1Q96QH2 718 aa3.89□□□□□ -1.79
SMC4-208ENST00000467468 ATG101Q9BSB4 218 aa3.89□□□□□ -1.79
SMC4-208ENST00000467468 C1orf21Q9H246 121 aa3.89□□□□□ -1.79
SMC4-208ENST00000467468 IL25Q9H293 177 aa3.89□□□□□ -1.79
SMC4-208ENST00000467468 ZNF556Q9HAH1 456 aa3.89□□□□□ -1.79
SMC4-208ENST00000467468 GSN-AS1Q9NRJ2 163 aa3.89□□□□□ -1.79
SMC4-208ENST00000467468 TXLNGQ9NUQ3 528 aa3.89□□□□□ -1.79
SMC4-208ENST00000467468 ZNF701Q9NV72 531 aaPredicted RBP3.89□□□□□ -1.79
SMC4-208ENST00000467468 HMG20BQ9P0W2 317 aa3.89□□□□□ -1.79
SMC4-208ENST00000467468 CHKBQ9Y259 395 aa3.89□□□□□ -1.79
SMC4-208ENST00000467468 WDR83OSQ9Y284 106 aa3.89□□□□□ -1.79
SMC4-208ENST00000467468 MTF2Q9Y483 593 aaPredicted RBP3.89□□□□□ -1.79
SMC4-208ENST00000467468 SAA2-SAA4A0A096LPE2 208 aa3.88□□□□□ -1.79
SMC4-208ENST00000467468 RNF103-CHMP3A0A140T963 221 aa3.88□□□□□ -1.79
SMC4-208ENST00000467468 KRT87PA6NCN2 255 aa3.88□□□□□ -1.79
SMC4-208ENST00000467468 SLC9B1P1A6NJY1 282 aa3.88□□□□□ -1.79
SMC4-208ENST00000467468 RNF103O00237 685 aa3.88□□□□□ -1.79
SMC4-208ENST00000467468 GAPDHSO14556 408 aaPredicted RBP3.88□□□□□ -1.79
SMC4-208ENST00000467468 KRT86O43790 486 aa3.88□□□□□ -1.79
SMC4-208ENST00000467468 PRPSAP2O60256 369 aa3.88□□□□□ -1.79
SMC4-208ENST00000467468 CRCPO75575 148 aa3.88□□□□□ -1.79
SMC4-208ENST00000467468 PDE9AO76083 593 aa3.88□□□□□ -1.79
SMC4-208ENST00000467468 TFAP2AP05549 437 aa3.88□□□□□ -1.79
SMC4-208ENST00000467468 LIPFP07098 398 aa3.88□□□□□ -1.79
SMC4-208ENST00000467468 ITGA2P17301 1181 aa3.88□□□□□ -1.79
SMC4-208ENST00000467468 AHRP35869 848 aa3.88□□□□□ -1.79
SMC4-208ENST00000467468 GNL1P36915 607 aaPredicted RBP3.88□□□□□ -1.79
SMC4-208ENST00000467468 NPBWR1P48145 328 aa3.88□□□□□ -1.79
SMC4-208ENST00000467468 ARCN1P48444 511 aaKnown RBP3.88□□□□□ -1.79
SMC4-208ENST00000467468 EEF1A1P68104 462 aaKnown RBP3.88□□□□□ -1.79
SMC4-208ENST00000467468 ARHGAP1Q07960 439 aa3.88□□□□□ -1.79
SMC4-208ENST00000467468 SLC20A2Q08357 652 aa3.88□□□□□ -1.79
SMC4-208ENST00000467468 ILF2Q12905 390 aaKnown RBP3.88□□□□□ -1.79
SMC4-208ENST00000467468 MFAP5Q13361 173 aa3.88□□□□□ -1.79
SMC4-208ENST00000467468 KRT81Q14533 505 aa3.88□□□□□ -1.79
SMC4-208ENST00000467468 SF3B4Q15427 424 aaKnown RBP eCLIP3.88□□□□□ -1.792e-8■■■■□ 23.1
SMC4-208ENST00000467468 UGT3A2Q3SY77 523 aa3.88□□□□□ -1.79
SMC4-208ENST00000467468 DNAJC21Q5F1R6 531 aaKnown RBP3.88□□□□□ -1.79
SMC4-208ENST00000467468 EEF1A1P5Q5VTE0 462 aa3.88□□□□□ -1.79
SMC4-208ENST00000467468 PRAMEF8Q5VWM4 474 aa3.88□□□□□ -1.79
SMC4-208ENST00000467468 OR7E24Q6IFN5 339 aa3.88□□□□□ -1.79
SMC4-208ENST00000467468 RHBDF2Q6PJF5 856 aa3.88□□□□□ -1.79
SMC4-208ENST00000467468 PRSS55Q6UWB4 352 aaPredicted RBP3.88□□□□□ -1.79
SMC4-208ENST00000467468 BTNL8Q6UX41 500 aa3.88□□□□□ -1.79
SMC4-208ENST00000467468 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.88□□□□□ -1.794e-23■■■■■ 72.8
SMC4-208ENST00000467468 AMIGO1Q86WK6 493 aa3.88□□□□□ -1.79
SMC4-208ENST00000467468 ODF3L1Q8IXM7 274 aa3.88□□□□□ -1.79
SMC4-208ENST00000467468 CFAP206Q8IYR0 622 aa3.88□□□□□ -1.79
SMC4-208ENST00000467468 APCDD1Q8J025 514 aa3.88□□□□□ -1.79
SMC4-208ENST00000467468 HDDC3Q8N4P3 179 aa3.88□□□□□ -1.79
SMC4-208ENST00000467468 LRRC8CQ8TDW0 803 aa3.88□□□□□ -1.79
SMC4-208ENST00000467468 UBLCP1Q8WVY7 318 aaPredicted RBP3.88□□□□□ -1.79
SMC4-208ENST00000467468 OXNAD1Q96HP4 312 aaPredicted RBP3.88□□□□□ -1.79
SMC4-208ENST00000467468 ABHD8Q96I13 439 aa3.88□□□□□ -1.79
SMC4-208ENST00000467468 PANX3Q96QZ0 392 aa3.88□□□□□ -1.79
SMC4-208ENST00000467468 FSD1Q9BTV5 496 aa3.88□□□□□ -1.79
SMC4-208ENST00000467468 ABCG8Q9H221 673 aa3.88□□□□□ -1.79
SMC4-208ENST00000467468 SNX25Q9H3E2 840 aa3.88□□□□□ -1.79
SMC4-208ENST00000467468 HPF1Q9NWY4 346 aa3.88□□□□□ -1.79
SMC4-208ENST00000467468 P4HTMQ9NXG6 502 aa3.88□□□□□ -1.79
SMC4-208ENST00000467468 FETUBQ9UGM5 382 aa3.88□□□□□ -1.79
SMC4-208ENST00000467468 TRIM17Q9Y577 477 aa3.88□□□□□ -1.79
SMC4-208ENST00000467468 TEX264Q9Y6I9 313 aa3.88□□□□□ -1.79
SMC4-208ENST00000467468 C5orf51A6NDU8 294 aa3.87□□□□□ -1.79
SMC4-208ENST00000467468 ZNF587BE7ETH6 402 aa3.87□□□□□ -1.79
SMC4-208ENST00000467468 E9PI62 339 aa3.87□□□□□ -1.79
SMC4-208ENST00000467468 PLOD2O00469 737 aa3.87□□□□□ -1.79
SMC4-208ENST00000467468 RPS6KA5O75582 802 aa3.87□□□□□ -1.79
SMC4-208ENST00000467468 RAD51DO75771 328 aa3.87□□□□□ -1.79
SMC4-208ENST00000467468 STAM2O75886 525 aa3.87□□□□□ -1.79
SMC4-208ENST00000467468 KRT36O76013 467 aa3.87□□□□□ -1.79
SMC4-208ENST00000467468 PMS2P2O95744 297 aa3.87□□□□□ -1.79
SMC4-208ENST00000467468 KRT19P08727 400 aa3.87□□□□□ -1.79
SMC4-208ENST00000467468 ANKRD34CP0C6C1 535 aa3.87□□□□□ -1.79
SMC4-208ENST00000467468 HSPA8P11142 646 aaKnown RBP3.87□□□□□ -1.79
SMC4-208ENST00000467468 HLA-DOBP13765 273 aa3.87□□□□□ -1.79
SMC4-208ENST00000467468 CKMT2P17540 419 aa3.87□□□□□ -1.79
SMC4-208ENST00000467468 CBLP22681 906 aa3.87□□□□□ -1.79
SMC4-208ENST00000467468 SERPINB6P35237 376 aa3.87□□□□□ -1.79
SMC4-208ENST00000467468 LUMP51884 338 aaPredicted RBP3.87□□□□□ -1.79
SMC4-208ENST00000467468 CASP9P55211 416 aa3.87□□□□□ -1.79
SMC4-208ENST00000467468 UCP2P55851 309 aa3.87□□□□□ -1.79
SMC4-208ENST00000467468 RELQ04864 619 aaPredicted RBP3.87□□□□□ -1.79
SMC4-208ENST00000467468 DLG1Q12959 904 aa3.87□□□□□ -1.79
SMC4-208ENST00000467468 DUOXA1Q1HG43 343 aa3.87□□□□□ -1.79
SMC4-208ENST00000467468 ZNF672Q499Z4 452 aaPredicted RBP3.87□□□□□ -1.79
SMC4-208ENST00000467468 TOR1AIP1Q5JTV8 583 aa3.87□□□□□ -1.79
SMC4-208ENST00000467468 C9orf50Q5SZB4 431 aa3.87□□□□□ -1.79
SMC4-208ENST00000467468 PRSS42Q7Z5A4 293 aa3.87□□□□□ -1.79
SMC4-208ENST00000467468 MEX3DQ86XN8 651 aaKnown RBP3.87□□□□□ -1.79
SMC4-208ENST00000467468 KMT5CQ86Y97 462 aa3.87□□□□□ -1.79
SMC4-208ENST00000467468 AQP12AQ8IXF9 295 aa3.87□□□□□ -1.79
SMC4-208ENST00000467468 KLHDC8AQ8IYD2 350 aa3.87□□□□□ -1.79
SMC4-208ENST00000467468 CRYBG2Q8N1P7 616 aa3.87□□□□□ -1.79
SMC4-208ENST00000467468 MRPL43Q8N983 215 aaKnown RBP3.87□□□□□ -1.79
SMC4-208ENST00000467468 CKAP2Q8WWK9 683 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms