RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 BUB1O43683 1085 aa5.3□□□□□ -1.56
PTCD3-207ENST00000467273 DIAPH2O60879 1101 aa5.3□□□□□ -1.56
PTCD3-207ENST00000467273 PHF2O75151 1096 aa5.3□□□□□ -1.56
PTCD3-207ENST00000467273 GRAP2O75791 330 aa5.3□□□□□ -1.56
PTCD3-207ENST00000467273 LETM1O95202 739 aaPredicted RBP5.3□□□□□ -1.56
PTCD3-207ENST00000467273 FTLP02792 175 aaPredicted RBP5.3□□□□□ -1.56
PTCD3-207ENST00000467273 CCDC175P0C221 793 aa5.3□□□□□ -1.56
PTCD3-207ENST00000467273 ZNF888P0CJ79 500 aaPredicted RBP5.3□□□□□ -1.56
PTCD3-207ENST00000467273 GM2AP17900 193 aa5.3□□□□□ -1.56
PTCD3-207ENST00000467273 AGAP20933 346 aa5.3□□□□□ -1.56
PTCD3-207ENST00000467273 HTR1EP28566 365 aa5.3□□□□□ -1.56
PTCD3-207ENST00000467273 ECHS1P30084 290 aa5.3□□□□□ -1.56
PTCD3-207ENST00000467273 CTNNA1P35221 906 aaKnown RBP5.3□□□□□ -1.56
PTCD3-207ENST00000467273 MAPK9P45984 424 aa5.3□□□□□ -1.56
PTCD3-207ENST00000467273 FMO5P49326 533 aa5.3□□□□□ -1.56
PTCD3-207ENST00000467273 SULT1E1P49888 294 aa5.3□□□□□ -1.56
PTCD3-207ENST00000467273 AGFG1P52594 562 aaKnown RBP5.3□□□□□ -1.56
PTCD3-207ENST00000467273 GSDMDP57764 484 aa5.3□□□□□ -1.56
PTCD3-207ENST00000467273 LRMPQ12912 555 aa5.3□□□□□ -1.56
PTCD3-207ENST00000467273 CHAF1BQ13112 559 aa5.3□□□□□ -1.56
PTCD3-207ENST00000467273 CUL4AQ13619 759 aa5.3□□□□□ -1.56
PTCD3-207ENST00000467273 MST1LQ2TV78 715 aa5.3□□□□□ -1.56
PTCD3-207ENST00000467273 C19orf54Q5BKX5 351 aa5.3□□□□□ -1.56
PTCD3-207ENST00000467273 MANEALQ5VSG8 457 aa5.3□□□□□ -1.56
PTCD3-207ENST00000467273 ATL3Q6DD88 541 aa5.3□□□□□ -1.56
PTCD3-207ENST00000467273 IYDQ6PHW0 289 aa5.3□□□□□ -1.56
PTCD3-207ENST00000467273 XKRXQ6PP77 449 aa5.3□□□□□ -1.56
PTCD3-207ENST00000467273 Q6ZS92 163 aa5.3□□□□□ -1.56
PTCD3-207ENST00000467273 BNIPLQ7Z465 357 aa5.3□□□□□ -1.56
PTCD3-207ENST00000467273 TBC1D1Q86TI0 1168 aaPredicted RBP5.3□□□□□ -1.56
PTCD3-207ENST00000467273 TAX1BP1Q86VP1 789 aa5.3□□□□□ -1.56
PTCD3-207ENST00000467273 NLRP14Q86W24 1093 aa5.3□□□□□ -1.56
PTCD3-207ENST00000467273 ZADH2Q8N4Q0 377 aa5.3□□□□□ -1.56
PTCD3-207ENST00000467273 ZNF808Q8N4W9 903 aaPredicted RBP5.3□□□□□ -1.56
PTCD3-207ENST00000467273 LSMEM1Q8N8F7 131 aa5.3□□□□□ -1.56
PTCD3-207ENST00000467273 LMO3Q8TAP4 145 aa5.3□□□□□ -1.56
PTCD3-207ENST00000467273 GIMAP1Q8WWP7 306 aa5.3□□□□□ -1.56
PTCD3-207ENST00000467273 GFM2Q969S9 779 aaKnown RBP5.3□□□□□ -1.56
PTCD3-207ENST00000467273 NUS1Q96E22 293 aa5.3□□□□□ -1.56
PTCD3-207ENST00000467273 CLPTM1LQ96KA5 538 aa5.3□□□□□ -1.56
PTCD3-207ENST00000467273 COQ10AQ96MF6 247 aa5.3□□□□□ -1.56
PTCD3-207ENST00000467273 LRFN5Q96NI6 719 aa5.3□□□□□ -1.56
PTCD3-207ENST00000467273 DMRTA2Q96SC8 542 aa5.3□□□□□ -1.56
PTCD3-207ENST00000467273 SLX1AQ9BQ83 275 aa5.3□□□□□ -1.56
PTCD3-207ENST00000467273 RAB33BQ9H082 229 aa5.3□□□□□ -1.56
PTCD3-207ENST00000467273 ING3Q9NXR8 418 aa5.3□□□□□ -1.56
PTCD3-207ENST00000467273 SEMA5BQ9P283 1151 aa5.3□□□□□ -1.56
PTCD3-207ENST00000467273 EPHA6Q9UF33 1036 aa5.3□□□□□ -1.56
PTCD3-207ENST00000467273 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.3□□□□□ -1.56
PTCD3-207ENST00000467273 OR12D3Q9UGF7 316 aa5.3□□□□□ -1.56
PTCD3-207ENST00000467273 OSGIN2Q9Y236 505 aa5.3□□□□□ -1.56
PTCD3-207ENST00000467273 RRP15Q9Y3B9 282 aaKnown RBP5.3□□□□□ -1.56
PTCD3-207ENST00000467273 ACTL7AQ9Y615 435 aa5.3□□□□□ -1.56
PTCD3-207ENST00000467273 FOXN3O00409 490 aaPredicted RBP5.29□□□□□ -1.56
PTCD3-207ENST00000467273 E2F3O00716 465 aa5.29□□□□□ -1.56
PTCD3-207ENST00000467273 ZNF185O15231 689 aa5.29□□□□□ -1.56
PTCD3-207ENST00000467273 KCNN4O15554 427 aa5.29□□□□□ -1.56
PTCD3-207ENST00000467273 GFPT2O94808 682 aa5.29□□□□□ -1.56
PTCD3-207ENST00000467273 PIGNO95427 931 aa5.29□□□□□ -1.56
PTCD3-207ENST00000467273 BAG2O95816 211 aa5.29□□□□□ -1.56
PTCD3-207ENST00000467273 KRT5P13647 590 aa5.29□□□□□ -1.56
PTCD3-207ENST00000467273 F3P13726 295 aa5.29□□□□□ -1.56
PTCD3-207ENST00000467273 CD99P14209 185 aa5.29□□□□□ -1.56
PTCD3-207ENST00000467273 NELFEP18615 380 aaKnown RBP5.29□□□□□ -1.56
PTCD3-207ENST00000467273 GALNSP34059 522 aa5.29□□□□□ -1.56
PTCD3-207ENST00000467273 KRT20P35900 424 aa5.29□□□□□ -1.56
PTCD3-207ENST00000467273 ME1P48163 572 aa5.29□□□□□ -1.56
PTCD3-207ENST00000467273 MEOX1P50221 254 aa5.29□□□□□ -1.56
PTCD3-207ENST00000467273 CLCNKAP51800 687 aa5.29□□□□□ -1.56
PTCD3-207ENST00000467273 SOX8P57073 446 aa5.29□□□□□ -1.56
PTCD3-207ENST00000467273 UBASH3AP57075 661 aa5.29□□□□□ -1.56
PTCD3-207ENST00000467273 SESN2P58004 480 aaPredicted RBP5.29□□□□□ -1.56
PTCD3-207ENST00000467273 ACY1Q03154 408 aa5.29□□□□□ -1.56
PTCD3-207ENST00000467273 LRRC63Q05C16 580 aa5.29□□□□□ -1.56
PTCD3-207ENST00000467273 NSUN2Q08J23 767 aaKnown RBP eCLIP5.29□□□□□ -1.56
PTCD3-207ENST00000467273 NFATC2Q13469 925 aa5.29□□□□□ -1.56
PTCD3-207ENST00000467273 SLMAPQ14BN4 828 aa5.29□□□□□ -1.56
PTCD3-207ENST00000467273 ACOX1Q15067 660 aa5.29□□□□□ -1.56
PTCD3-207ENST00000467273 PARP15Q460N3 678 aa5.29□□□□□ -1.56
PTCD3-207ENST00000467273 ANO6Q4KMQ2 910 aa5.29□□□□□ -1.56
PTCD3-207ENST00000467273 PYCR3Q53H96 274 aa5.29□□□□□ -1.56
PTCD3-207ENST00000467273 INTS11Q5TA45 600 aaKnown RBP5.29□□□□□ -1.56
PTCD3-207ENST00000467273 B3GNTL1Q67FW5 361 aaPredicted RBP5.29□□□□□ -1.56
PTCD3-207ENST00000467273 ISM2Q6H9L7 571 aa5.29□□□□□ -1.56
PTCD3-207ENST00000467273 UNC5DQ6UXZ4 953 aa5.29□□□□□ -1.56
PTCD3-207ENST00000467273 FAM183BPQ6ZVS7 135 aa5.29□□□□□ -1.56
PTCD3-207ENST00000467273 SRLQ86TD4 932 aa5.29□□□□□ -1.56
PTCD3-207ENST00000467273 KMT5CQ86Y97 462 aa5.29□□□□□ -1.56
PTCD3-207ENST00000467273 GALNT13Q8IUC8 556 aa5.29□□□□□ -1.56
PTCD3-207ENST00000467273 PQLC1Q8N2U9 271 aa5.29□□□□□ -1.56
PTCD3-207ENST00000467273 OR8H1Q8NGG4 311 aa5.29□□□□□ -1.56
PTCD3-207ENST00000467273 CCHCR1Q8TD31 782 aa5.29□□□□□ -1.56
PTCD3-207ENST00000467273 ZNF480Q8WV37 535 aa5.29□□□□□ -1.56
PTCD3-207ENST00000467273 FAR1Q8WVX9 515 aa5.29□□□□□ -1.56
PTCD3-207ENST00000467273 ITLN2Q8WWU7 325 aaPredicted RBP5.29□□□□□ -1.56
PTCD3-207ENST00000467273 SNX21Q969T3 373 aa5.29□□□□□ -1.56
PTCD3-207ENST00000467273 DTD2Q96FN9 168 aa5.29□□□□□ -1.56
PTCD3-207ENST00000467273 ZDHHC12Q96GR4 267 aa5.29□□□□□ -1.56
PTCD3-207ENST00000467273 FER1L6-AS2Q96M78 137 aa5.29□□□□□ -1.56
PTCD3-207ENST00000467273 PLEKHG4BQ96PX9 1271 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms