RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 CUL3Q13618 768 aa3.59□□□□□ -1.83
SMC4-207ENST00000467263 ITGA7Q13683 1181 aa3.59□□□□□ -1.83
SMC4-207ENST00000467263 PTPRCAPQ14761 206 aa3.59□□□□□ -1.83
SMC4-207ENST00000467263 SLC1A5Q15758 541 aa3.59□□□□□ -1.83
SMC4-207ENST00000467263 PDLIM3Q53GG5 364 aaPredicted RBP3.59□□□□□ -1.83
SMC4-207ENST00000467263 KRT39Q6A163 491 aa3.59□□□□□ -1.83
SMC4-207ENST00000467263 NAA16Q6N069 864 aaPredicted RBP3.59□□□□□ -1.83
SMC4-207ENST00000467263 UGT3A1Q6NUS8 523 aa3.59□□□□□ -1.83
SMC4-207ENST00000467263 FIP1L1Q6UN15 594 aaKnown RBP3.59□□□□□ -1.83
SMC4-207ENST00000467263 C16orf54Q6UWD8 224 aa3.59□□□□□ -1.83
SMC4-207ENST00000467263 Q6ZRP5 223 aa3.59□□□□□ -1.83
SMC4-207ENST00000467263 DET1Q7L5Y6 550 aa3.59□□□□□ -1.83
SMC4-207ENST00000467263 G2E3Q7L622 706 aa3.59□□□□□ -1.83
SMC4-207ENST00000467263 KLHDC1Q8N7A1 406 aa3.59□□□□□ -1.83
SMC4-207ENST00000467263 KCTD6Q8NC69 237 aa3.59□□□□□ -1.83
SMC4-207ENST00000467263 OR10Q1Q8NGQ4 319 aa3.59□□□□□ -1.83
SMC4-207ENST00000467263 AGAP3Q96P47 875 aa3.59□□□□□ -1.83
SMC4-207ENST00000467263 TRIM51Q9BSJ1 452 aa3.59□□□□□ -1.83
SMC4-207ENST00000467263 FGFBP2Q9BYJ0 223 aa3.59□□□□□ -1.83
SMC4-207ENST00000467263 SLC2A11Q9BYW1 496 aa3.59□□□□□ -1.83
SMC4-207ENST00000467263 PRRG4Q9BZD6 226 aa3.59□□□□□ -1.83
SMC4-207ENST00000467263 Q9H8V8 135 aa3.59□□□□□ -1.83
SMC4-207ENST00000467263 MAN2C1Q9NTJ4 1040 aa3.59□□□□□ -1.83
SMC4-207ENST00000467263 ANKEF1Q9NU02 776 aa3.59□□□□□ -1.83
SMC4-207ENST00000467263 WDR35Q9P2L0 1181 aa3.59□□□□□ -1.83
SMC4-207ENST00000467263 R4GN57 208 aa3.59□□□□□ -1.83
SMC4-207ENST00000467263 A0A1W2PPK0 400 aa3.58□□□□□ -1.84
SMC4-207ENST00000467263 A0A1W2PR80 420 aa3.58□□□□□ -1.84
SMC4-207ENST00000467263 SNURFLB1AK76 121 aa3.58□□□□□ -1.84
SMC4-207ENST00000467263 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.58□□□□□ -1.84
SMC4-207ENST00000467263 PTGESO14684 152 aa3.58□□□□□ -1.84
SMC4-207ENST00000467263 SLC2A2P11168 524 aaPredicted RBP3.58□□□□□ -1.84
SMC4-207ENST00000467263 IL11P20809 199 aa3.58□□□□□ -1.84
SMC4-207ENST00000467263 CYP2A7P20853 494 aa3.58□□□□□ -1.84
SMC4-207ENST00000467263 CPT2P23786 658 aa3.58□□□□□ -1.84
SMC4-207ENST00000467263 RAD52P43351 418 aa3.58□□□□□ -1.84
SMC4-207ENST00000467263 KLC1Q07866 573 aa3.58□□□□□ -1.84
SMC4-207ENST00000467263 AIMP1Q12904 312 aaKnown RBP3.58□□□□□ -1.84
SMC4-207ENST00000467263 EXT1Q16394 746 aa3.58□□□□□ -1.84
SMC4-207ENST00000467263 CTU2Q2VPK5 515 aaKnown RBP3.58□□□□□ -1.84
SMC4-207ENST00000467263 TCTE1Q5JU00 501 aa3.58□□□□□ -1.84
SMC4-207ENST00000467263 WLSQ5T9L3 541 aa3.58□□□□□ -1.84
SMC4-207ENST00000467263 FAAP20Q6NZ36 180 aa3.58□□□□□ -1.84
SMC4-207ENST00000467263 ZNF613Q6PF04 617 aa3.58□□□□□ -1.84
SMC4-207ENST00000467263 PCGF5Q86SE9 256 aa3.58□□□□□ -1.84
SMC4-207ENST00000467263 GTSCR1Q86UQ5 136 aa3.58□□□□□ -1.84
SMC4-207ENST00000467263 APOBEC4Q8WW27 367 aaKnown RBP3.58□□□□□ -1.84
SMC4-207ENST00000467263 OTUB1Q96FW1 271 aaPredicted RBP3.58□□□□□ -1.84
SMC4-207ENST00000467263 USP28Q96RU2 1077 aa3.58□□□□□ -1.84
SMC4-207ENST00000467263 FEVQ99581 238 aa3.58□□□□□ -1.84
SMC4-207ENST00000467263 PANK2Q9BZ23 570 aa3.58□□□□□ -1.84
SMC4-207ENST00000467263 FAM49AQ9H0Q0 323 aaPredicted RBP3.58□□□□□ -1.84
SMC4-207ENST00000467263 CDH20Q9HBT6 801 aa3.58□□□□□ -1.84
SMC4-207ENST00000467263 CHST11Q9NPF2 352 aa3.58□□□□□ -1.84
SMC4-207ENST00000467263 SPHK2Q9NRA0 654 aa3.58□□□□□ -1.84
SMC4-207ENST00000467263 PANK4Q9NVE7 773 aa3.58□□□□□ -1.84
SMC4-207ENST00000467263 C19orf25Q9UFG5 118 aaPredicted RBP3.58□□□□□ -1.84
SMC4-207ENST00000467263 C15orf61A6NNL5 157 aa3.57□□□□□ -1.84
SMC4-207ENST00000467263 E9PQ18 207 aa3.57□□□□□ -1.84
SMC4-207ENST00000467263 P4HA2O15460 535 aa3.57□□□□□ -1.84
SMC4-207ENST00000467263 C22orf31O95567 290 aa3.57□□□□□ -1.84
SMC4-207ENST00000467263 OR52Z1P0C646 297 aa3.57□□□□□ -1.84
SMC4-207ENST00000467263 ZSCAN5DPP0CG00 497 aa3.57□□□□□ -1.84
SMC4-207ENST00000467263 ASCL1P50553 236 aa3.57□□□□□ -1.84
SMC4-207ENST00000467263 CALD1Q05682 793 aaKnown RBP3.57□□□□□ -1.84
SMC4-207ENST00000467263 RBPJQ06330 500 aa3.57□□□□□ -1.84
SMC4-207ENST00000467263 ACSM1Q08AH1 577 aa3.57□□□□□ -1.84
SMC4-207ENST00000467263 ENPP2Q13822 863 aa3.57□□□□□ -1.84
SMC4-207ENST00000467263 NECTIN1Q15223 517 aa3.57□□□□□ -1.84
SMC4-207ENST00000467263 CRY2Q49AN0 593 aa3.57□□□□□ -1.84
SMC4-207ENST00000467263 FASTKD1Q53R41 847 aaKnown RBP3.57□□□□□ -1.84
SMC4-207ENST00000467263 DOK6Q6PKX4 331 aa3.57□□□□□ -1.84
SMC4-207ENST00000467263 MYH14Q7Z406 1995 aaKnown RBP3.57□□□□□ -1.84
SMC4-207ENST00000467263 OR6S1Q8NH40 331 aa3.57□□□□□ -1.84
SMC4-207ENST00000467263 ZNF519Q8TB69 540 aa3.57□□□□□ -1.84
SMC4-207ENST00000467263 ARSGQ96EG1 525 aa3.57□□□□□ -1.84
SMC4-207ENST00000467263 PGAP3Q96FM1 320 aaPredicted RBP3.57□□□□□ -1.84
SMC4-207ENST00000467263 C4orf45Q96LM5 186 aa3.57□□□□□ -1.84
SMC4-207ENST00000467263 MUS81Q96NY9 551 aa3.57□□□□□ -1.84
SMC4-207ENST00000467263 UBXN6Q9BZV1 441 aa3.57□□□□□ -1.84
SMC4-207ENST00000467263 ZMYND12Q9H0C1 365 aa3.57□□□□□ -1.84
SMC4-207ENST00000467263 TMX4Q9H1E5 349 aaPredicted RBP3.57□□□□□ -1.84
SMC4-207ENST00000467263 UPF3AQ9H1J1 476 aaKnown RBP3.57□□□□□ -1.84
SMC4-207ENST00000467263 MEX3AA1L020 520 aaKnown RBP3.56□□□□□ -1.84
SMC4-207ENST00000467263 SYNDIG1LA6NDD5 238 aa3.56□□□□□ -1.84
SMC4-207ENST00000467263 URADA6NGE7 173 aa3.56□□□□□ -1.84
SMC4-207ENST00000467263 CSN3P07498 182 aa3.56□□□□□ -1.84
SMC4-207ENST00000467263 MYBL1P10243 752 aa3.56□□□□□ -1.84
SMC4-207ENST00000467263 AZU1P20160 251 aa3.56□□□□□ -1.84
SMC4-207ENST00000467263 SP100P23497 879 aaPredicted RBP3.56□□□□□ -1.84
SMC4-207ENST00000467263 DNA2P51530 1060 aa3.56□□□□□ -1.84
SMC4-207ENST00000467263 VAMP7P51809 220 aa3.56□□□□□ -1.84
SMC4-207ENST00000467263 CSNK2BP67870 215 aa3.56□□□□□ -1.84
SMC4-207ENST00000467263 ZNF74Q16587 644 aa3.56□□□□□ -1.84
SMC4-207ENST00000467263 ARMC4Q5T2S8 1044 aa3.56□□□□□ -1.84
SMC4-207ENST00000467263 TRIM65Q6PJ69 517 aa3.56□□□□□ -1.84
SMC4-207ENST00000467263 LRRTM1Q86UE6 522 aa3.56□□□□□ -1.84
SMC4-207ENST00000467263 NDUFAF2Q8N183 169 aa3.56□□□□□ -1.84
SMC4-207ENST00000467263 ANKRD13CQ8N6S4 541 aa3.56□□□□□ -1.84
SMC4-207ENST00000467263 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms