RNA–Protein interactions for RNA: ENST00000466704.1

CALD1-214, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 903 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-214ENST00000466704 KIAA1644Q3SXP7 199 aa3.61□□□□□ -1.83
CALD1-214ENST00000466704 FIGLAQ6QHK4 219 aa3.61□□□□□ -1.83
CALD1-214ENST00000466704 MFSD6Q6ZSS7 791 aa3.61□□□□□ -1.83
CALD1-214ENST00000466704 ZNF554Q86TJ5 538 aa3.61□□□□□ -1.83
CALD1-214ENST00000466704 APLFQ8IW19 511 aaPredicted RBP3.61□□□□□ -1.83
CALD1-214ENST00000466704 GPC2Q8N158 579 aa3.61□□□□□ -1.83
CALD1-214ENST00000466704 PAPD5Q8NDF8 572 aaKnown RBP3.61□□□□□ -1.83
CALD1-214ENST00000466704 PRPF31Q8WWY3 499 aaKnown RBP3.61□□□□□ -1.83
CALD1-214ENST00000466704 SENP5Q96HI0 755 aaPredicted RBP3.61□□□□□ -1.83
CALD1-214ENST00000466704 SGK494Q96LW2 274 aa3.61□□□□□ -1.83
CALD1-214ENST00000466704 RTP3Q9BQQ7 232 aa3.61□□□□□ -1.83
CALD1-214ENST00000466704 C16orf70Q9BSU1 422 aa3.61□□□□□ -1.83
CALD1-214ENST00000466704 COA1Q9GZY4 146 aa3.61□□□□□ -1.83
CALD1-214ENST00000466704 ACKR4Q9NPB9 350 aa3.61□□□□□ -1.83
CALD1-214ENST00000466704 MRPL15Q9P015 296 aaKnown RBP3.61□□□□□ -1.83
CALD1-214ENST00000466704 GRIP1Q9Y3R0 1128 aa3.61□□□□□ -1.83
CALD1-214ENST00000466704 ASTN2O75129 1339 aaPredicted RBP3.61□□□□□ -1.83
CALD1-214ENST00000466704 ZNF541Q9H0D2 1346 aa3.61□□□□□ -1.83
CALD1-214ENST00000466704 MED23Q9ULK4 1368 aa3.61□□□□□ -1.83
CALD1-214ENST00000466704 AFDNP55196 1824 aaKnown RBP3.6□□□□□ -1.83
CALD1-214ENST00000466704 ANKRD31Q8N7Z5 1873 aa3.6□□□□□ -1.83
CALD1-214ENST00000466704 COL4A1P02462 1669 aa3.6□□□□□ -1.83
CALD1-214ENST00000466704 MAGEB17A8MXT2 336 aa3.6□□□□□ -1.83
CALD1-214ENST00000466704 PSMD14O00487 310 aa3.6□□□□□ -1.83
CALD1-214ENST00000466704 XRCC3O43542 346 aa3.6□□□□□ -1.83
CALD1-214ENST00000466704 TSPAN1O60635 241 aa3.6□□□□□ -1.83
CALD1-214ENST00000466704 HMMRO75330 724 aa3.6□□□□□ -1.83
CALD1-214ENST00000466704 ENTPD3O75355 529 aa3.6□□□□□ -1.83
CALD1-214ENST00000466704 CREG1O75629 220 aa3.6□□□□□ -1.83
CALD1-214ENST00000466704 SURF6O75683 361 aaKnown RBP3.6□□□□□ -1.83
CALD1-214ENST00000466704 CIAO1O76071 339 aa3.6□□□□□ -1.83
CALD1-214ENST00000466704 PLA2G4BP0C869 781 aa3.6□□□□□ -1.83
CALD1-214ENST00000466704 TRIM21P19474 475 aaKnown RBP3.6□□□□□ -1.83
CALD1-214ENST00000466704 ITGA3P26006 1051 aa3.6□□□□□ -1.83
CALD1-214ENST00000466704 PSMC6P62333 389 aa3.6□□□□□ -1.83
CALD1-214ENST00000466704 CDK3Q00526 305 aa3.6□□□□□ -1.83
CALD1-214ENST00000466704 TFCP2Q12800 502 aa3.6□□□□□ -1.83
CALD1-214ENST00000466704 NR1D2Q14995 579 aa3.6□□□□□ -1.83
CALD1-214ENST00000466704 PCLAFQ15004 111 aa3.6□□□□□ -1.83
CALD1-214ENST00000466704 CAVIN4Q5BKX8 364 aa3.6□□□□□ -1.83
CALD1-214ENST00000466704 MDH1BQ5I0G3 518 aa3.6□□□□□ -1.83
CALD1-214ENST00000466704 GRTP1Q5TC63 336 aa3.6□□□□□ -1.83
CALD1-214ENST00000466704 WDR78Q5VTH9 848 aa3.6□□□□□ -1.83
CALD1-214ENST00000466704 ARHGEF16Q5VV41 709 aa3.6□□□□□ -1.83
CALD1-214ENST00000466704 ARHGAP17Q68EM7 881 aa3.6□□□□□ -1.83
CALD1-214ENST00000466704 C15orf52Q6ZUT6 534 aaKnown RBP3.6□□□□□ -1.83
CALD1-214ENST00000466704 CEP57Q86XR8 500 aa3.6□□□□□ -1.83
CALD1-214ENST00000466704 LINC00346Q8IVM7 164 aa3.6□□□□□ -1.83
CALD1-214ENST00000466704 GUF1Q8N442 669 aaKnown RBP3.6□□□□□ -1.83
CALD1-214ENST00000466704 CPSF7Q8N684 471 aaKnown RBP3.6□□□□□ -1.83
CALD1-214ENST00000466704 WDSUB1Q8N9V3 476 aa3.6□□□□□ -1.83
CALD1-214ENST00000466704 OR1J1Q8NGS3 322 aa3.6□□□□□ -1.83
CALD1-214ENST00000466704 OR2AJ1Q8NGZ0 328 aa3.6□□□□□ -1.83
CALD1-214ENST00000466704 TAS1R2Q8TE23 839 aa3.6□□□□□ -1.83
CALD1-214ENST00000466704 WBP2Q969T9 261 aa3.6□□□□□ -1.83
CALD1-214ENST00000466704 LRR1Q96L50 414 aa3.6□□□□□ -1.83
CALD1-214ENST00000466704 LITAFQ99732 161 aa3.6□□□□□ -1.83
CALD1-214ENST00000466704 MXD3Q9BW11 206 aa3.6□□□□□ -1.83
CALD1-214ENST00000466704 DPAGT1Q9H3H5 408 aa3.6□□□□□ -1.83
CALD1-214ENST00000466704 CD209Q9NNX6 404 aa3.6□□□□□ -1.83
CALD1-214ENST00000466704 SIX2Q9NPC8 291 aa3.6□□□□□ -1.83
CALD1-214ENST00000466704 OSER1Q9NX31 292 aa3.6□□□□□ -1.83
CALD1-214ENST00000466704 CHORDC1Q9UHD1 332 aaPredicted RBP3.6□□□□□ -1.83
CALD1-214ENST00000466704 FBXO2Q9UK22 296 aaPredicted RBP3.6□□□□□ -1.83
CALD1-214ENST00000466704 KCNK7Q9Y2U2 307 aa3.6□□□□□ -1.83
CALD1-214ENST00000466704 LTBP1Q14766 1721 aa3.6□□□□□ -1.83
CALD1-214ENST00000466704 STK36Q9NRP7 1315 aa3.6□□□□□ -1.83
CALD1-214ENST00000466704 N4BP2Q86UW6 1770 aaPredicted RBP3.6□□□□□ -1.83
CALD1-214ENST00000466704 NUP98P52948 1817 aa3.6□□□□□ -1.83
CALD1-214ENST00000466704 WDR81Q562E7 1941 aa3.6□□□□□ -1.83
CALD1-214ENST00000466704 LOC102723996A0A087X1L8 192 aa3.59□□□□□ -1.83
CALD1-214ENST00000466704 GPR75-ASB3A0A0A6YYF3 556 aa3.59□□□□□ -1.83
CALD1-214ENST00000466704 HYKKA2RU49 373 aa3.59□□□□□ -1.83
CALD1-214ENST00000466704 HEPACAM2A8MVW5 462 aa3.59□□□□□ -1.83
CALD1-214ENST00000466704 PRR32B1ATL7 298 aa3.59□□□□□ -1.83
CALD1-214ENST00000466704 HMGB1P1B2RPK0 211 aaPredicted RBP3.59□□□□□ -1.83
CALD1-214ENST00000466704 E9PI62 339 aa3.59□□□□□ -1.83
CALD1-214ENST00000466704 DNM1LO00429 736 aa3.59□□□□□ -1.83
CALD1-214ENST00000466704 ADAMDEC1O15204 470 aa3.59□□□□□ -1.83
CALD1-214ENST00000466704 MED24O75448 989 aa3.59□□□□□ -1.83
CALD1-214ENST00000466704 FRAT2O75474 233 aaPredicted RBP3.59□□□□□ -1.83
CALD1-214ENST00000466704 CD48P09326 243 aa3.59□□□□□ -1.83
CALD1-214ENST00000466704 RPS12P25398 132 aaKnown RBP3.59□□□□□ -1.83
CALD1-214ENST00000466704 ALDH4A1P30038 563 aa3.59□□□□□ -1.83
CALD1-214ENST00000466704 EPHX2P34913 555 aa3.59□□□□□ -1.83
CALD1-214ENST00000466704 EPS15P42566 896 aa3.59□□□□□ -1.83
CALD1-214ENST00000466704 GYG1P46976 350 aa3.59□□□□□ -1.83
CALD1-214ENST00000466704 LMAN1P49257 510 aa3.59□□□□□ -1.83
CALD1-214ENST00000466704 GMPSP49915 693 aaPredicted RBP3.59□□□□□ -1.83
CALD1-214ENST00000466704 TIMM10P62072 90 aa3.59□□□□□ -1.83
CALD1-214ENST00000466704 CX3CL1P78423 397 aa3.59□□□□□ -1.83
CALD1-214ENST00000466704 PMP22Q01453 160 aa3.59□□□□□ -1.83
CALD1-214ENST00000466704 LGALS3BPQ08380 585 aa3.59□□□□□ -1.83
CALD1-214ENST00000466704 PNRC1Q12796 327 aaPredicted RBP3.59□□□□□ -1.83
CALD1-214ENST00000466704 TAF13Q15543 124 aa3.59□□□□□ -1.83
CALD1-214ENST00000466704 KRTAP27-1Q3LI81 207 aa3.59□□□□□ -1.83
CALD1-214ENST00000466704 GTDC1Q4AE62 458 aa3.59□□□□□ -1.83
CALD1-214ENST00000466704 FAM53AQ6NSI3 398 aaPredicted RBP3.59□□□□□ -1.83
CALD1-214ENST00000466704 TMEM173Q86WV6 379 aaPredicted RBP3.59□□□□□ -1.83
CALD1-214ENST00000466704 COMMD2Q86X83 199 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms