RNA–Protein interactions for RNA: ENST00000466471.1

SORT1-202, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 521 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-202ENST00000466471 LRRC8BQ6P9F7 803 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 C16orf89Q6UX73 402 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 MFSD7Q6UXD7 560 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 CLEC18BQ6UXF7 455 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 USP30Q70CQ3 517 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 USP51Q70EK9 711 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 PXKQ7Z7A4 578 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 PRUNE1Q86TP1 453 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 LACC1Q8IV20 430 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 ADGRF2Q8IZF7 708 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 ATP6V0D2Q8N8Y2 350 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 SLC4A11Q8NBS3 891 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 CLEC18CQ8NCF0 446 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 GMCL1P1Q8NEA9 526 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 FBXL13Q8NEE6 735 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 FAM46DQ8NEK8 389 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 DDHD1Q8NEL9 900 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 OR5M3Q8NGP4 307 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 CPT1CQ8TCG5 803 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 ACER1Q8TDN7 264 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 GIPC3Q8TF64 312 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 ATG4AQ8WYN0 398 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 STARD8Q92502 1023 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 SEMA4DQ92854 862 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 FAM120BQ96EK7 910 aaKnown RBP3.38□□□□□ -1.87
SORT1-202ENST00000466471 TMA16Q96EY4 203 aaKnown RBP3.38□□□□□ -1.87
SORT1-202ENST00000466471 WBP1Q96G27 269 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 PLEKHA8Q96JA3 519 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 RADILQ96JH8 1075 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 SPATA17Q96L03 361 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 ZNF778Q96MU6 729 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 PPP1R10Q96QC0 940 aaKnown RBP3.38□□□□□ -1.87
SORT1-202ENST00000466471 MYADMQ96S97 322 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 SORT1Q99523 831 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 GPR20Q99678 358 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 NPAS1Q99742 590 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 SH2D3AQ9BRG2 576 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 GPATCH1Q9BRR8 931 aaKnown RBP3.38□□□□□ -1.87
SORT1-202ENST00000466471 EDEM2Q9BV94 578 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 FTHL17Q9BXU8 183 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 GCOM2Q9BZD3 368 aaPredicted RBP3.38□□□□□ -1.87
SORT1-202ENST00000466471 NUF2Q9BZD4 464 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 WDR11Q9BZH6 1224 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 IMPG2Q9BZV3 1241 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 C20orf27Q9GZN8 174 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 NELFAQ9H3P2 528 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 ZNF768Q9H5H4 540 aaKnown RBP3.38□□□□□ -1.87
SORT1-202ENST00000466471 RPF2Q9H7B2 306 aaKnown RBP3.38□□□□□ -1.87
SORT1-202ENST00000466471 C10orf88Q9H8K7 445 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 CLK4Q9HAZ1 481 aaKnown RBP3.38□□□□□ -1.87
SORT1-202ENST00000466471 MOV10Q9HCE1 1003 aaKnown RBP3.38□□□□□ -1.87
SORT1-202ENST00000466471 GCM1Q9NP62 436 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 PFDN4Q9NQP4 134 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 PARVAQ9NVD7 372 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 ATAD3AQ9NVI7 634 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 DDX18Q9NVP1 670 aaKnown RBP3.38□□□□□ -1.87
SORT1-202ENST00000466471 BEX4Q9NWD9 120 aaPredicted RBP3.38□□□□□ -1.87
SORT1-202ENST00000466471 HCFC1R1Q9NWW0 138 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 DUS2Q9NX74 493 aaKnown RBP3.38□□□□□ -1.87
SORT1-202ENST00000466471 NCKIPSDQ9NZQ3 722 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 EPS15L1Q9UBC2 864 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 CD300AQ9UGN4 299 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 DCDC2Q9UHG0 476 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 XPO7Q9UIA9 1087 aaKnown RBP3.38□□□□□ -1.87
SORT1-202ENST00000466471 MAGEL2Q9UJ55 1249 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 CDC42EP3Q9UKI2 254 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 MYRFQ9Y2G1 1151 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 UGT2A1Q9Y4X1 527 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 AP4S1Q9Y587 144 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 PI4KAP42356 2102 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 COL4A2P08572 1712 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 GOLGA8QA0A0J9YX86 632 aa3.37□□□□□ -1.87
SORT1-202ENST00000466471 BCLAF3A2AJT9 711 aaKnown RBP3.37□□□□□ -1.87
SORT1-202ENST00000466471 GOLGA8OA6NCC3 632 aa3.37□□□□□ -1.87
SORT1-202ENST00000466471 AGAP14A8MT82 685 aa3.37□□□□□ -1.87
SORT1-202ENST00000466471 TMEM114B3SHH9 223 aa3.37□□□□□ -1.87
SORT1-202ENST00000466471 GOLGA8NF8WBI6 632 aa3.37□□□□□ -1.87
SORT1-202ENST00000466471 H0YAE9 185 aa3.37□□□□□ -1.87
SORT1-202ENST00000466471 J3KTA2 159 aa3.37□□□□□ -1.87
SORT1-202ENST00000466471 APOC4-APOC2K7ER74 178 aa3.37□□□□□ -1.87
SORT1-202ENST00000466471 KPNA4O00629 521 aaPredicted RBP3.37□□□□□ -1.87
SORT1-202ENST00000466471 DLGAP1O14490 977 aa3.37□□□□□ -1.87
SORT1-202ENST00000466471 COPEO14579 308 aa3.37□□□□□ -1.87
SORT1-202ENST00000466471 AP3D1O14617 1153 aa3.37□□□□□ -1.87
SORT1-202ENST00000466471 ACOX3O15254 700 aa3.37□□□□□ -1.87
SORT1-202ENST00000466471 PAPSS1O43252 624 aaPredicted RBP3.37□□□□□ -1.87
SORT1-202ENST00000466471 IDH3BO43837 385 aa3.37□□□□□ -1.87
SORT1-202ENST00000466471 SLC28A2O43868 658 aa3.37□□□□□ -1.87
SORT1-202ENST00000466471 KLHL41O60662 606 aa3.37□□□□□ -1.87
SORT1-202ENST00000466471 PLIN3O60664 434 aa3.37□□□□□ -1.87
SORT1-202ENST00000466471 TRIM13O60858 407 aa3.37□□□□□ -1.87
SORT1-202ENST00000466471 CNOT3O75175 753 aaKnown RBP3.37□□□□□ -1.87
SORT1-202ENST00000466471 GLRA3O75311 464 aa3.37□□□□□ -1.87
SORT1-202ENST00000466471 SEMA7AO75326 666 aa3.37□□□□□ -1.87
SORT1-202ENST00000466471 SEC14L2O76054 403 aa3.37□□□□□ -1.87
SORT1-202ENST00000466471 PGM3O95394 542 aa3.37□□□□□ -1.87
SORT1-202ENST00000466471 GH2P01242 217 aa3.37□□□□□ -1.87
SORT1-202ENST00000466471 APOEP02649 317 aa3.37□□□□□ -1.87
SORT1-202ENST00000466471 APOC2P02655 101 aa3.37□□□□□ -1.87
SORT1-202ENST00000466471 CALB1P05937 261 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms