RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 FAM214AQ32MH5 1076 aa11.21□□□□□ -0.61
CNOT4-208ENST00000465721 VWA2Q5GFL6 755 aa11.21□□□□□ -0.61
CNOT4-208ENST00000465721 WASHC2DQ5SRD0 308 aa11.21□□□□□ -0.61
CNOT4-208ENST00000465721 CCDC181Q5TID7 509 aa11.21□□□□□ -0.61
CNOT4-208ENST00000465721 HIBCHQ6NVY1 386 aaPredicted RBP11.21□□□□□ -0.61
CNOT4-208ENST00000465721 PRMT9Q6P2P2 845 aa11.21□□□□□ -0.61
CNOT4-208ENST00000465721 DARS2Q6PI48 645 aaKnown RBP11.21□□□□□ -0.61
CNOT4-208ENST00000465721 CNSTQ6PJW8 725 aa11.21□□□□□ -0.61
CNOT4-208ENST00000465721 UNC5DQ6UXZ4 953 aa11.21□□□□□ -0.61
CNOT4-208ENST00000465721 LAPTM4BQ86VI4 370 aa11.21□□□□□ -0.61
CNOT4-208ENST00000465721 OR13J1Q8NGT2 312 aa11.21□□□□□ -0.61
CNOT4-208ENST00000465721 RNF32Q9H0A6 362 aa11.21□□□□□ -0.61
CNOT4-208ENST00000465721 LRRC40Q9H9A6 602 aa11.21□□□□□ -0.61
CNOT4-208ENST00000465721 EFR3BQ9Y2G0 817 aa11.21□□□□□ -0.61
CNOT4-208ENST00000465721 ZNF407Q9C0G0 2248 aa11.2□□□□□ -0.62
CNOT4-208ENST00000465721 PHF3Q92576 2039 aaKnown RBP11.2□□□□□ -0.62
CNOT4-208ENST00000465721 FLNAP21333 2647 aaKnown RBP11.2□□□□□ -0.62
CNOT4-208ENST00000465721 LOC105369274A0A096LPK9 316 aa11.2□□□□□ -0.62
CNOT4-208ENST00000465721 LOC102723532A0A0G2JNH3 316 aa11.2□□□□□ -0.62
CNOT4-208ENST00000465721 KRT87PA6NCN2 255 aa11.2□□□□□ -0.62
CNOT4-208ENST00000465721 IDSB3KWA1 339 aa11.2□□□□□ -0.62
CNOT4-208ENST00000465721 FFAR3O14843 346 aa11.2□□□□□ -0.62
CNOT4-208ENST00000465721 GPR42O15529 346 aa11.2□□□□□ -0.62
CNOT4-208ENST00000465721 SRPX2O60687 465 aaPredicted RBP11.2□□□□□ -0.62
CNOT4-208ENST00000465721 WISP2O76076 250 aa11.2□□□□□ -0.62
CNOT4-208ENST00000465721 RASAL1O95294 804 aa11.2□□□□□ -0.62
CNOT4-208ENST00000465721 METTL18O95568 372 aa11.2□□□□□ -0.62
CNOT4-208ENST00000465721 CRYABP02511 175 aaKnown RBP11.2□□□□□ -0.62
CNOT4-208ENST00000465721 TPM3P06753 285 aa11.2□□□□□ -0.62
CNOT4-208ENST00000465721 ITGAMP11215 1152 aa11.2□□□□□ -0.62
CNOT4-208ENST00000465721 CTNNA1P35221 906 aaKnown RBP11.2□□□□□ -0.62
CNOT4-208ENST00000465721 EFNA3P52797 238 aa11.2□□□□□ -0.62
CNOT4-208ENST00000465721 PMP22Q01453 160 aa11.2□□□□□ -0.62
CNOT4-208ENST00000465721 HSPA14Q0VDF9 509 aa11.2□□□□□ -0.62
CNOT4-208ENST00000465721 PRTGQ2VWP7 1150 aa11.2□□□□□ -0.62
CNOT4-208ENST00000465721 KRTAP21-3Q3LHN1 58 aa11.2□□□□□ -0.62
CNOT4-208ENST00000465721 CCDC38Q502W7 563 aa11.2□□□□□ -0.62
CNOT4-208ENST00000465721 XKRXQ6PP77 449 aa11.2□□□□□ -0.62
CNOT4-208ENST00000465721 SPNS3Q6ZMD2 512 aa11.2□□□□□ -0.62
CNOT4-208ENST00000465721 RIPOR1Q6ZS17 1223 aa11.2□□□□□ -0.62
CNOT4-208ENST00000465721 OR4N4Q8N0Y3 316 aa11.2□□□□□ -0.62
CNOT4-208ENST00000465721 AMER2Q8N7J2 671 aa11.2□□□□□ -0.62
CNOT4-208ENST00000465721 OR2L3Q8NG85 312 aa11.2□□□□□ -0.62
CNOT4-208ENST00000465721 DNAJB8Q8NHS0 232 aa11.2□□□□□ -0.62
CNOT4-208ENST00000465721 CFAP61Q8NHU2 1237 aa11.2□□□□□ -0.62
CNOT4-208ENST00000465721 ZUFSPQ96AP4 578 aa11.2□□□□□ -0.62
CNOT4-208ENST00000465721 LRRC45Q96CN5 670 aa11.2□□□□□ -0.62
CNOT4-208ENST00000465721 MIPEPQ99797 713 aa11.2□□□□□ -0.62
CNOT4-208ENST00000465721 OSBPL8Q9BZF1 889 aa11.2□□□□□ -0.62
CNOT4-208ENST00000465721 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.2□□□□□ -0.62
CNOT4-208ENST00000465721 SYNPO2LQ9H987 977 aa11.2□□□□□ -0.62
CNOT4-208ENST00000465721 RIC8BQ9NVN3 520 aa11.2□□□□□ -0.62
CNOT4-208ENST00000465721 STOX2Q9P2F5 926 aaPredicted RBP11.2□□□□□ -0.62
CNOT4-208ENST00000465721 TFR2Q9UP52 801 aa11.2□□□□□ -0.62
CNOT4-208ENST00000465721 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.2□□□□□ -0.62
CNOT4-208ENST00000465721 ABCA4P78363 2273 aa11.19□□□□□ -0.62
CNOT4-208ENST00000465721 PRRC2AP48634 2157 aaKnown RBP11.19□□□□□ -0.62
CNOT4-208ENST00000465721 A0A0J9YVX5 310 aa11.19□□□□□ -0.62
CNOT4-208ENST00000465721 A0A1W2PPV9 198 aa11.19□□□□□ -0.62
CNOT4-208ENST00000465721 OR2A25A4D2G3 310 aa11.19□□□□□ -0.62
CNOT4-208ENST00000465721 OR5H15A6NDH6 313 aa11.19□□□□□ -0.62
CNOT4-208ENST00000465721 IQCF5A8MTL0 148 aa11.19□□□□□ -0.62
CNOT4-208ENST00000465721 SLC19A2O60779 497 aa11.19□□□□□ -0.62
CNOT4-208ENST00000465721 PRAMEF2O60811 474 aa11.19□□□□□ -0.62
CNOT4-208ENST00000465721 SLCO2B1O94956 709 aa11.19□□□□□ -0.62
CNOT4-208ENST00000465721 AGAP20933 346 aa11.19□□□□□ -0.62
CNOT4-208ENST00000465721 SSTR2P30874 369 aa11.19□□□□□ -0.62
CNOT4-208ENST00000465721 SEMA3AQ14563 771 aa11.19□□□□□ -0.62
CNOT4-208ENST00000465721 PCOLCEQ15113 449 aa11.19□□□□□ -0.62
CNOT4-208ENST00000465721 C3AR1Q16581 482 aa11.19□□□□□ -0.62
CNOT4-208ENST00000465721 PARP6Q2NL67 630 aa11.19□□□□□ -0.62
CNOT4-208ENST00000465721 MUM1Q2TAK8 710 aa11.19□□□□□ -0.62
CNOT4-208ENST00000465721 CCSMST1Q4G0I0 132 aa11.19□□□□□ -0.62
CNOT4-208ENST00000465721 AADACL2Q6P093 401 aa11.19□□□□□ -0.62
CNOT4-208ENST00000465721 AFTPHQ6ULP2 937 aa11.19□□□□□ -0.62
CNOT4-208ENST00000465721 ZNF534Q76KX8 674 aa11.19□□□□□ -0.62
CNOT4-208ENST00000465721 VSTM4Q8IW00 320 aa11.19□□□□□ -0.62
CNOT4-208ENST00000465721 AMER3Q8N944 861 aa11.19□□□□□ -0.62
CNOT4-208ENST00000465721 HMGCLL1Q8TB92 370 aa11.19□□□□□ -0.62
CNOT4-208ENST00000465721 ASZ1Q8WWH4 475 aa11.19□□□□□ -0.62
CNOT4-208ENST00000465721 RAB11FIP5Q9BXF6 653 aa11.19□□□□□ -0.62
CNOT4-208ENST00000465721 C14orf105Q9NVL8 296 aa11.19□□□□□ -0.62
CNOT4-208ENST00000465721 SLC2A6Q9UGQ3 507 aa11.19□□□□□ -0.62
CNOT4-208ENST00000465721 ZC3H7BQ9UGR2 993 aaKnown RBP11.19□□□□□ -0.62
CNOT4-208ENST00000465721 TINAGQ9UJW2 476 aa11.19□□□□□ -0.62
CNOT4-208ENST00000465721 SLC39A10Q9ULF5 831 aa11.19□□□□□ -0.62
CNOT4-208ENST00000465721 HRNRQ86YZ3 2850 aaPredicted RBP11.19□□□□□ -0.62
CNOT4-208ENST00000465721 LOC102723996A0A087X1L8 192 aa11.18□□□□□ -0.62
CNOT4-208ENST00000465721 F8W8V4 182 aa11.18□□□□□ -0.62
CNOT4-208ENST00000465721 GOT2P00505 430 aaKnown RBP11.18□□□□□ -0.62
CNOT4-208ENST00000465721 APOA4P06727 396 aa11.18□□□□□ -0.62
CNOT4-208ENST00000465721 UQCRHP07919 91 aa11.18□□□□□ -0.62
CNOT4-208ENST00000465721 CTNNA2P26232 953 aa11.18□□□□□ -0.62
CNOT4-208ENST00000465721 AOAHP28039 575 aa11.18□□□□□ -0.62
CNOT4-208ENST00000465721 KIR3DL1P43629 444 aa11.18□□□□□ -0.62
CNOT4-208ENST00000465721 BDKRB1P46663 353 aa11.18□□□□□ -0.62
CNOT4-208ENST00000465721 EMP2P54851 167 aa11.18□□□□□ -0.62
CNOT4-208ENST00000465721 GDF10P55107 478 aa11.18□□□□□ -0.62
CNOT4-208ENST00000465721 YBX1P67809 324 aaKnown RBP11.18□□□□□ -0.62
CNOT4-208ENST00000465721 ACVR1Q04771 509 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms