RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 KCTD4Q8WVF5 259 aa16.31■□□□□ 0.2
USP39-211ENST00000465282 USP7Q93009 1102 aa16.31■□□□□ 0.2
USP39-211ENST00000465282 RHBDF1Q96CC6 855 aa16.31■□□□□ 0.2
USP39-211ENST00000465282 MED8Q96G25 268 aa16.31■□□□□ 0.2
USP39-211ENST00000465282 GPR78Q96P69 363 aa16.31■□□□□ 0.2
USP39-211ENST00000465282 ATOH8Q96SQ7 321 aa16.31■□□□□ 0.2
USP39-211ENST00000465282 ALG9Q9H6U8 611 aa16.31■□□□□ 0.2
USP39-211ENST00000465282 MRPS30Q9NP92 439 aaKnown RBP16.31■□□□□ 0.2
USP39-211ENST00000465282 FGF21Q9NSA1 209 aa16.31■□□□□ 0.2
USP39-211ENST00000465282 EURLQ9NYK6 297 aa16.31■□□□□ 0.2
USP39-211ENST00000465282 NUDT4Q9NZJ9 180 aa16.31■□□□□ 0.2
USP39-211ENST00000465282 TAC3Q9UHF0 121 aa16.31■□□□□ 0.2
USP39-211ENST00000465282 RARRES3Q9UL19 164 aa16.31■□□□□ 0.2
USP39-211ENST00000465282 SNX7Q9UNH6 387 aa16.31■□□□□ 0.2
USP39-211ENST00000465282 CHD8Q9HCK8 2581 aa16.3■□□□□ 0.2
USP39-211ENST00000465282 MT-ND3P03897 115 aa16.3■□□□□ 0.2
USP39-211ENST00000465282 EBLN1P0CF75 366 aa16.3■□□□□ 0.2
USP39-211ENST00000465282 PVRP15151 417 aa16.3■□□□□ 0.2
USP39-211ENST00000465282 FOLR1P15328 257 aa16.3■□□□□ 0.2
USP39-211ENST00000465282 MAGP20916 626 aa16.3■□□□□ 0.2
USP39-211ENST00000465282 SH3BP2P78314 561 aa16.3■□□□□ 0.2
USP39-211ENST00000465282 IRF9Q00978 393 aa16.3■□□□□ 0.2
USP39-211ENST00000465282 TUBB3Q13509 450 aa16.3■□□□□ 0.2
USP39-211ENST00000465282 TSTA3Q13630 321 aaPredicted RBP16.3■□□□□ 0.2
USP39-211ENST00000465282 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.3■□□□□ 0.2
USP39-211ENST00000465282 PPP1R3BQ86XI6 285 aa16.3■□□□□ 0.2
USP39-211ENST00000465282 MZB1Q8WU39 189 aa16.3■□□□□ 0.2
USP39-211ENST00000465282 HNRNPLLQ8WVV9 542 aaKnown RBP16.3■□□□□ 0.2
USP39-211ENST00000465282 FGF11Q92914 225 aa16.3■□□□□ 0.2
USP39-211ENST00000465282 ACAT2Q9BWD1 397 aa16.3■□□□□ 0.2
USP39-211ENST00000465282 ATG10Q9H0Y0 220 aa16.3■□□□□ 0.2
USP39-211ENST00000465282 CD274Q9NZQ7 290 aa16.3■□□□□ 0.2
USP39-211ENST00000465282 TBK1Q9UHD2 729 aa16.3■□□□□ 0.2
USP39-211ENST00000465282 SERTAD3Q9UJW9 196 aa16.3■□□□□ 0.2
USP39-211ENST00000465282 TMCO1Q9UM00 188 aa16.3■□□□□ 0.2
USP39-211ENST00000465282 ASPMQ8IZT6 3477 aa16.3■□□□□ 0.2
USP39-211ENST00000465282 PMS2P1A4D2B8 440 aa16.29■□□□□ 0.2
USP39-211ENST00000465282 C9orf172C9J069 976 aa16.29■□□□□ 0.2
USP39-211ENST00000465282 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.29■□□□□ 0.2
USP39-211ENST00000465282 CTIFO43310 598 aaKnown RBP16.29■□□□□ 0.2
USP39-211ENST00000465282 CAPNS1P04632 268 aa16.29■□□□□ 0.2
USP39-211ENST00000465282 GSTA1P08263 222 aa16.29■□□□□ 0.2
USP39-211ENST00000465282 NPPBP16860 134 aa16.29■□□□□ 0.2
USP39-211ENST00000465282 KRT15P19012 456 aa16.29■□□□□ 0.2
USP39-211ENST00000465282 PSMB5P28074 263 aa16.29■□□□□ 0.2
USP39-211ENST00000465282 SLC5A2P31639 672 aa16.29■□□□□ 0.2
USP39-211ENST00000465282 ZXDCQ2QGD7 858 aaPredicted RBP16.29■□□□□ 0.2
USP39-211ENST00000465282 PTCHD3Q3KNS1 767 aa16.29■□□□□ 0.2
USP39-211ENST00000465282 CROCCP2Q86T23 111 aa16.29■□□□□ 0.2
USP39-211ENST00000465282 C17orf64Q86WR6 236 aa16.29■□□□□ 0.2
USP39-211ENST00000465282 DNAJC22Q8N4W6 341 aa16.29■□□□□ 0.2
USP39-211ENST00000465282 EPS8L3Q8TE67 593 aaKnown RBP16.29■□□□□ 0.2
USP39-211ENST00000465282 N4BP2L2Q92802 583 aaPredicted RBP16.29■□□□□ 0.2
USP39-211ENST00000465282 ZNF501Q96CX3 271 aaPredicted RBP16.29■□□□□ 0.2
USP39-211ENST00000465282 DPH7Q9BTV6 452 aa16.29■□□□□ 0.2
USP39-211ENST00000465282 CAPS2Q9BXY5 557 aa16.29■□□□□ 0.2
USP39-211ENST00000465282 UNKQ9C0B0 810 aaKnown RBP16.29■□□□□ 0.2
USP39-211ENST00000465282 TMEM184CQ9NVA4 438 aa16.29■□□□□ 0.2
USP39-211ENST00000465282 DCDC2Q9UHG0 476 aa16.29■□□□□ 0.2
USP39-211ENST00000465282 PTBP2Q9UKA9 531 aaKnown RBP16.29■□□□□ 0.2
USP39-211ENST00000465282 PLCL2Q9UPR0 1127 aa16.29■□□□□ 0.2
USP39-211ENST00000465282 B3GALT1Q9Y5Z6 326 aa16.29■□□□□ 0.2
USP39-211ENST00000465282 MDC1Q14676 2089 aaKnown RBP16.29■□□□□ 0.2
USP39-211ENST00000465282 CACNA1BQ00975 2339 aa16.29■□□□□ 0.2
USP39-211ENST00000465282 OR2A25A4D2G3 310 aa16.28■□□□□ 0.2
USP39-211ENST00000465282 AGRPO00253 132 aa16.28■□□□□ 0.2
USP39-211ENST00000465282 SRPX2O60687 465 aaPredicted RBP16.28■□□□□ 0.2
USP39-211ENST00000465282 PRAMEF10O60809 474 aa16.28■□□□□ 0.2
USP39-211ENST00000465282 GMPRP36959 345 aa16.28■□□□□ 0.2
USP39-211ENST00000465282 SLCO1A2P46721 670 aa16.28■□□□□ 0.2
USP39-211ENST00000465282 SLC6A12P48065 614 aa16.28■□□□□ 0.2
USP39-211ENST00000465282 KCNC1P48547 511 aa16.28■□□□□ 0.2
USP39-211ENST00000465282 KCNAB1Q14722 419 aa16.28■□□□□ 0.2
USP39-211ENST00000465282 ZIC1Q15915 447 aa16.28■□□□□ 0.2
USP39-211ENST00000465282 TECRLQ5HYJ1 363 aa16.28■□□□□ 0.2
USP39-211ENST00000465282 FCRL6Q6DN72 434 aa16.28■□□□□ 0.2
USP39-211ENST00000465282 ZNF425Q6IV72 752 aa16.28■□□□□ 0.2
USP39-211ENST00000465282 METTL2BQ6P1Q9 378 aaKnown RBP16.28■□□□□ 0.2
USP39-211ENST00000465282 CDHR3Q6ZTQ4 885 aa16.28■□□□□ 0.2
USP39-211ENST00000465282 IQCKQ8N0W5 287 aa16.28■□□□□ 0.2
USP39-211ENST00000465282 PLD6Q8N2A8 252 aaKnown RBP16.28■□□□□ 0.2
USP39-211ENST00000465282 SNIP1Q8TAD8 396 aaKnown RBP16.28■□□□□ 0.2
USP39-211ENST00000465282 MRPL57Q9BQC6 102 aaKnown RBP16.28■□□□□ 0.2
USP39-211ENST00000465282 PLCD4Q9BRC7 762 aa16.28■□□□□ 0.2
USP39-211ENST00000465282 FAM60AQ9NP50 221 aa16.28■□□□□ 0.2
USP39-211ENST00000465282 ENAMQ9NRM1 1142 aa16.28■□□□□ 0.2
USP39-211ENST00000465282 LGALS13Q9UHV8 139 aa16.28■□□□□ 0.2
USP39-211ENST00000465282 PLAAQ9Y263 795 aa16.28■□□□□ 0.2
USP39-211ENST00000465282 KCNE2Q9Y6J6 123 aa16.28■□□□□ 0.2
USP39-211ENST00000465282 TLDC2A0PJX2 215 aa16.27■□□□□ 0.2
USP39-211ENST00000465282 C1QTNF9BB2RNN3 333 aa16.27■□□□□ 0.2
USP39-211ENST00000465282 MAP2K7O14733 419 aa16.27■□□□□ 0.2
USP39-211ENST00000465282 KLK8O60259 260 aa16.27■□□□□ 0.2
USP39-211ENST00000465282 C1QTNF9P0C862 333 aa16.27■□□□□ 0.2
USP39-211ENST00000465282 EZRP15311 586 aaKnown RBP16.27■□□□□ 0.2
USP39-211ENST00000465282 GLRBP48167 497 aa16.27■□□□□ 0.2
USP39-211ENST00000465282 GABRA4P48169 554 aa16.27■□□□□ 0.2
USP39-211ENST00000465282 ITGA1P56199 1179 aa16.27■□□□□ 0.2
USP39-211ENST00000465282 PCBP4P57723 403 aaKnown RBP16.27■□□□□ 0.2
USP39-211ENST00000465282 GPR19Q15760 415 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms