RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 OOSP2Q86WS3 158 aa16.87■□□□□ 0.29
CPSF4-209ENST00000465132 TCAIMQ8N3R3 496 aa16.87■□□□□ 0.29
CPSF4-209ENST00000465132 OR5AR1Q8NGP9 310 aa16.87■□□□□ 0.29
CPSF4-209ENST00000465132 OR9A1PQ8NGU1 263 aa16.87■□□□□ 0.29
CPSF4-209ENST00000465132 KIAA1191Q96A73 305 aa16.87■□□□□ 0.29
CPSF4-209ENST00000465132 SPRY4Q9C004 299 aa16.87■□□□□ 0.29
CPSF4-209ENST00000465132 EURLQ9NYK6 297 aa16.87■□□□□ 0.29
CPSF4-209ENST00000465132 GRID1Q9ULK0 1009 aa16.87■□□□□ 0.29
CPSF4-209ENST00000465132 RNF112Q9ULX5 631 aa16.87■□□□□ 0.29
CPSF4-209ENST00000465132 CFAP20Q9Y6A4 193 aaKnown RBP16.87■□□□□ 0.29
CPSF4-209ENST00000465132 HECTD1Q9ULT8 2610 aa16.86■□□□□ 0.29
CPSF4-209ENST00000465132 ZNF891A8MT65 544 aaPredicted RBP16.86■□□□□ 0.29
CPSF4-209ENST00000465132 A8MU76 341 aa16.86■□□□□ 0.29
CPSF4-209ENST00000465132 COPEO14579 308 aa16.86■□□□□ 0.29
CPSF4-209ENST00000465132 CAPN5O15484 640 aaPredicted RBP16.86■□□□□ 0.29
CPSF4-209ENST00000465132 GLRA3O75311 464 aa16.86■□□□□ 0.29
CPSF4-209ENST00000465132 RFPL1O75677 317 aa16.86■□□□□ 0.29
CPSF4-209ENST00000465132 WISP3O95389 354 aaPredicted RBP16.86■□□□□ 0.29
CPSF4-209ENST00000465132 SYF2O95926 243 aaKnown RBP16.86■□□□□ 0.29
CPSF4-209ENST00000465132 ANXA5P08758 320 aa16.86■□□□□ 0.29
CPSF4-209ENST00000465132 CD1DP15813 335 aa16.86■□□□□ 0.29
CPSF4-209ENST00000465132 CCND1P24385 295 aa16.86■□□□□ 0.29
CPSF4-209ENST00000465132 MC2RQ01718 297 aa16.86■□□□□ 0.29
CPSF4-209ENST00000465132 KCNAB2Q13303 367 aa16.86■□□□□ 0.29
CPSF4-209ENST00000465132 ZNF460Q14592 562 aa16.86■□□□□ 0.29
CPSF4-209ENST00000465132 TMEM207Q6UWW9 146 aa16.86■□□□□ 0.29
CPSF4-209ENST00000465132 AMIGO1Q86WK6 493 aa16.86■□□□□ 0.29
CPSF4-209ENST00000465132 SLC45A3Q96JT2 553 aa16.86■□□□□ 0.29
CPSF4-209ENST00000465132 HGH1Q9BTY7 390 aa16.86■□□□□ 0.29
CPSF4-209ENST00000465132 CNOT10Q9H9A5 744 aaKnown RBP16.86■□□□□ 0.29
CPSF4-209ENST00000465132 ARL15Q9NXU5 204 aa16.86■□□□□ 0.29
CPSF4-209ENST00000465132 TSR3Q9UJK0 312 aaKnown RBP16.86■□□□□ 0.29
CPSF4-209ENST00000465132 MID2Q9UJV3 735 aa16.86■□□□□ 0.29
CPSF4-209ENST00000465132 RUVBL2Q9Y230 463 aaKnown RBP16.86■□□□□ 0.29
CPSF4-209ENST00000465132 OARD1Q9Y530 152 aa16.86■□□□□ 0.29
CPSF4-209ENST00000465132 ACTL7BQ9Y614 415 aa16.86■□□□□ 0.29
CPSF4-209ENST00000465132 MYO1CO00159 1063 aa16.85■□□□□ 0.29
CPSF4-209ENST00000465132 DYNC1I1O14576 645 aa16.85■□□□□ 0.29
CPSF4-209ENST00000465132 MAP3K7O43318 606 aa16.85■□□□□ 0.29
CPSF4-209ENST00000465132 ATP8B1O43520 1251 aa16.85■□□□□ 0.29
CPSF4-209ENST00000465132 UBXN7O94888 489 aa16.85■□□□□ 0.29
CPSF4-209ENST00000465132 FKBP9O95302 570 aa16.85■□□□□ 0.29
CPSF4-209ENST00000465132 PYGBP11216 843 aa16.85■□□□□ 0.29
CPSF4-209ENST00000465132 KRT4P19013 534 aa16.85■□□□□ 0.29
CPSF4-209ENST00000465132 TFEBP19484 476 aa16.85■□□□□ 0.29
CPSF4-209ENST00000465132 CCR10P46092 362 aa16.85■□□□□ 0.29
CPSF4-209ENST00000465132 TLE1Q04724 770 aa16.85■□□□□ 0.29
CPSF4-209ENST00000465132 GPS2Q13227 327 aa16.85■□□□□ 0.29
CPSF4-209ENST00000465132 PRKG2Q13237 762 aa16.85■□□□□ 0.29
CPSF4-209ENST00000465132 NAA25Q14CX7 972 aa16.85■□□□□ 0.29
CPSF4-209ENST00000465132 TRABD2AQ86V40 505 aa16.85■□□□□ 0.29
CPSF4-209ENST00000465132 GPSM1Q86YR5 675 aa16.85■□□□□ 0.29
CPSF4-209ENST00000465132 PLXDC1Q8IUK5 500 aa16.85■□□□□ 0.29
CPSF4-209ENST00000465132 NLGN4XQ8N0W4 816 aa16.85■□□□□ 0.29
CPSF4-209ENST00000465132 NLGN4YQ8NFZ3 816 aaPredicted RBP16.85■□□□□ 0.29
CPSF4-209ENST00000465132 OR52E1Q8NGJ3 308 aa16.85■□□□□ 0.29
CPSF4-209ENST00000465132 ANKRD49Q8WVL7 239 aa16.85■□□□□ 0.29
CPSF4-209ENST00000465132 NCSTNQ92542 709 aa16.85■□□□□ 0.29
CPSF4-209ENST00000465132 ZDHHC12Q96GR4 267 aa16.85■□□□□ 0.29
CPSF4-209ENST00000465132 SCYL1Q96KG9 808 aa16.85■□□□□ 0.29
CPSF4-209ENST00000465132 CATSPER2Q96P56 530 aa16.85■□□□□ 0.29
CPSF4-209ENST00000465132 CTRCQ99895 268 aa16.85■□□□□ 0.29
CPSF4-209ENST00000465132 MRPL57Q9BQC6 102 aaKnown RBP16.85■□□□□ 0.29
CPSF4-209ENST00000465132 ZPBPQ9BS86 351 aa16.85■□□□□ 0.29
CPSF4-209ENST00000465132 GPN2Q9H9Y4 310 aaPredicted RBP16.85■□□□□ 0.29
CPSF4-209ENST00000465132 FBXO8Q9NRD0 319 aa16.85■□□□□ 0.29
CPSF4-209ENST00000465132 PCMTD2Q9NV79 361 aa16.85■□□□□ 0.29
CPSF4-209ENST00000465132 TUBD1Q9UJT1 453 aa16.85■□□□□ 0.29
CPSF4-209ENST00000465132 ARHGEF33A8MVX0 844 aa16.84■□□□□ 0.29
CPSF4-209ENST00000465132 NKX2-8O15522 239 aa16.84■□□□□ 0.29
CPSF4-209ENST00000465132 KERAO60938 352 aa16.84■□□□□ 0.29
CPSF4-209ENST00000465132 TAC1P20366 129 aa16.84■□□□□ 0.29
CPSF4-209ENST00000465132 CCDC153Q494R4 210 aa16.84■□□□□ 0.29
CPSF4-209ENST00000465132 CEACAM20Q6UY09 585 aa16.84■□□□□ 0.29
CPSF4-209ENST00000465132 TIPARPQ7Z3E1 657 aaKnown RBP16.84■□□□□ 0.29
CPSF4-209ENST00000465132 PTRH1Q86Y79 214 aaKnown RBP16.84■□□□□ 0.29
CPSF4-209ENST00000465132 SRRM1Q8IYB3 904 aaKnown RBP16.84■□□□□ 0.29
CPSF4-209ENST00000465132 CARFQ8N187 725 aa16.84■□□□□ 0.29
CPSF4-209ENST00000465132 MZB1Q8WU39 189 aa16.84■□□□□ 0.29
CPSF4-209ENST00000465132 KCTD4Q8WVF5 259 aa16.84■□□□□ 0.29
CPSF4-209ENST00000465132 SREK1Q8WXA9 508 aaKnown RBP16.84■□□□□ 0.29
CPSF4-209ENST00000465132 SMPDL3AQ92484 453 aa16.84■□□□□ 0.29
CPSF4-209ENST00000465132 KIAA1143Q96AT1 154 aaPredicted RBP16.84■□□□□ 0.29
CPSF4-209ENST00000465132 EGFL8Q99944 293 aa16.84■□□□□ 0.29
CPSF4-209ENST00000465132 RAB33BQ9H082 229 aa16.84■□□□□ 0.29
CPSF4-209ENST00000465132 PCBD2Q9H0N5 130 aa16.84■□□□□ 0.29
CPSF4-209ENST00000465132 MRPL46Q9H2W6 279 aaKnown RBP16.84■□□□□ 0.29
CPSF4-209ENST00000465132 SSU72Q9NP77 194 aaKnown RBP16.84■□□□□ 0.29
CPSF4-209ENST00000465132 MKS1Q9NXB0 559 aa16.84■□□□□ 0.29
CPSF4-209ENST00000465132 NUDT4Q9NZJ9 180 aa16.84■□□□□ 0.29
CPSF4-209ENST00000465132 PDE10AQ9Y233 779 aa16.84■□□□□ 0.29
CPSF4-209ENST00000465132 MAST4O15021 2626 aa16.83■□□□□ 0.29
CPSF4-209ENST00000465132 LOC101059948A0A1B0GTJ6 334 aa16.83■□□□□ 0.28
CPSF4-209ENST00000465132 NPEPPSL1A6NEC2 478 aa16.83■□□□□ 0.28
CPSF4-209ENST00000465132 C2orf74A8MZ97 194 aa16.83■□□□□ 0.28
CPSF4-209ENST00000465132 SMIM24O75264 130 aa16.83■□□□□ 0.28
CPSF4-209ENST00000465132 IPO13O94829 963 aaKnown RBP16.83■□□□□ 0.28
CPSF4-209ENST00000465132 UBR5O95071 2799 aaPredicted RBP16.83■□□□□ 0.28
CPSF4-209ENST00000465132 TPBGLP0DKB5 382 aa16.83■□□□□ 0.28
CPSF4-209ENST00000465132 KIR2DS3Q14952 304 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms