RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 CHRNEQ04844 493 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 DMPKQ09013 629 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 GRB14Q14449 540 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 IRF3Q14653 427 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 STARD3Q14849 445 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 EIF4HQ15056 248 aaKnown RBP7.1□□□□□ -1.27
USP48-206ENST00000464577 CDK10Q15131 360 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 VMACQ2NL98 169 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 ZRANB3Q5FWF4 1079 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 RNF19BQ6ZMZ0 732 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 CBLL1Q75N03 491 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 ZNF367Q7RTV3 350 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 ZNF551Q7Z340 670 aaPredicted RBP7.1□□□□□ -1.27
USP48-206ENST00000464577 ZSWIM9Q86XI8 627 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 ZZZ3Q8IYH5 903 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 NLGN4XQ8N0W4 816 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 FLCNQ8NFG4 579 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 OR7G1Q8NGA0 311 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 C9orf43Q8TAL5 461 aaPredicted RBP7.1□□□□□ -1.27
USP48-206ENST00000464577 ZNF675Q8TD23 568 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 CHTF18Q8WVB6 975 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 NELL1Q92832 810 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 RMDN1Q96DB5 314 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 SLC10A4Q96EP9 437 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 SUSD3Q96L08 255 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 C8orf48Q96LL4 319 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 UROC1Q96N76 676 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 RPRD1AQ96P16 312 aaPredicted RBP7.1□□□□□ -1.27
USP48-206ENST00000464577 CDK5RAP1Q96SZ6 601 aaKnown RBP7.1□□□□□ -1.27
USP48-206ENST00000464577 INPP5KQ9BT40 448 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 CINPQ9BW66 212 aaPredicted RBP7.1□□□□□ -1.27
USP48-206ENST00000464577 FAM126AQ9BYI3 521 aaPredicted RBP7.1□□□□□ -1.27
USP48-206ENST00000464577 CD244Q9BZW8 370 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 NSUN3Q9H649 340 aaKnown RBP7.1□□□□□ -1.27
USP48-206ENST00000464577 RETREG1Q9H6L5 497 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 ZFP14Q9HCL3 533 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 AASDHPPTQ9NRN7 309 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 RASSF1Q9NS23 344 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 SIRT5Q9NXA8 310 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 ZNF490Q9ULM2 529 aaPredicted RBP7.1□□□□□ -1.27
USP48-206ENST00000464577 PCDHB8Q9UN66 801 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 CFL2Q9Y281 166 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 ANGPTL3Q9Y5C1 460 aa7.1□□□□□ -1.27
USP48-206ENST00000464577 GREB1Q4ZG55 1949 aa7.09□□□□□ -1.27
USP48-206ENST00000464577 POLR2AP24928 1970 aaKnown RBP7.09□□□□□ -1.27
USP48-206ENST00000464577 NPIPB8E9PQR5 432 aa7.09□□□□□ -1.27
USP48-206ENST00000464577 hCG_2039718K7EN88 272 aa7.09□□□□□ -1.27
USP48-206ENST00000464577 FFAR3O14843 346 aa7.09□□□□□ -1.27
USP48-206ENST00000464577 STX7O15400 261 aaKnown RBP7.09□□□□□ -1.27
USP48-206ENST00000464577 INSIG1O15503 277 aa7.09□□□□□ -1.27
USP48-206ENST00000464577 GPR42O15529 346 aa7.09□□□□□ -1.27
USP48-206ENST00000464577 UGT2B17O75795 530 aa7.09□□□□□ -1.27
USP48-206ENST00000464577 ALX3O95076 343 aa7.09□□□□□ -1.27
USP48-206ENST00000464577 ADORA3P0DMS8 318 aa7.09□□□□□ -1.27
USP48-206ENST00000464577 RPS3P23396 243 aaKnown RBP eCLIP7.09□□□□□ -1.27
USP48-206ENST00000464577 PRPH2P23942 346 aa7.09□□□□□ -1.27
USP48-206ENST00000464577 MAPK1P28482 360 aa7.09□□□□□ -1.27
USP48-206ENST00000464577 KDELR2P33947 212 aa7.09□□□□□ -1.27
USP48-206ENST00000464577 GRK5P34947 590 aa7.09□□□□□ -1.27
USP48-206ENST00000464577 SLC19A1P41440 591 aa7.09□□□□□ -1.27
USP48-206ENST00000464577 SLC15A1P46059 708 aa7.09□□□□□ -1.27
USP48-206ENST00000464577 RGS4P49798 205 aa7.09□□□□□ -1.27
USP48-206ENST00000464577 MRPS6P82932 125 aaKnown RBP7.09□□□□□ -1.27
USP48-206ENST00000464577 CACNG1Q06432 222 aa7.09□□□□□ -1.27
USP48-206ENST00000464577 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.09□□□□□ -1.27
USP48-206ENST00000464577 EFEMP1Q12805 493 aa7.09□□□□□ -1.27
USP48-206ENST00000464577 GPR50Q13585 617 aa7.09□□□□□ -1.27
USP48-206ENST00000464577 TIMM50Q3ZCQ8 353 aa7.09□□□□□ -1.27
USP48-206ENST00000464577 ZFP69Q49AA0 526 aa7.09□□□□□ -1.27
USP48-206ENST00000464577 C5orf22Q49AR2 442 aa7.09□□□□□ -1.27
USP48-206ENST00000464577 ERAP2Q6P179 960 aa7.09□□□□□ -1.27
USP48-206ENST00000464577 DOK6Q6PKX4 331 aa7.09□□□□□ -1.27
USP48-206ENST00000464577 C19orf48Q6RUI8 117 aa7.09□□□□□ -1.27
USP48-206ENST00000464577 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.09□□□□□ -1.27
USP48-206ENST00000464577 CIR1Q86X95 450 aaPredicted RBP7.09□□□□□ -1.27
USP48-206ENST00000464577 BEND7Q8N7W2 519 aaPredicted RBP7.09□□□□□ -1.27
USP48-206ENST00000464577 ST13P5Q8NFI4 369 aaPredicted RBP7.09□□□□□ -1.27
USP48-206ENST00000464577 OR10Q1Q8NGQ4 319 aa7.09□□□□□ -1.27
USP48-206ENST00000464577 GGHQ92820 318 aa7.09□□□□□ -1.27
USP48-206ENST00000464577 HSH2DQ96JZ2 352 aa7.09□□□□□ -1.27
USP48-206ENST00000464577 SDHCQ99643 169 aaPredicted RBP7.09□□□□□ -1.27
USP48-206ENST00000464577 ZBED2Q9BTP6 218 aa7.09□□□□□ -1.27
USP48-206ENST00000464577 SPATA9Q9BWV2 254 aa7.09□□□□□ -1.27
USP48-206ENST00000464577 REXO4Q9GZR2 422 aaKnown RBP7.09□□□□□ -1.27
USP48-206ENST00000464577 MAGEH1Q9H213 219 aa7.09□□□□□ -1.27
USP48-206ENST00000464577 SLA2Q9H6Q3 261 aa7.09□□□□□ -1.27
USP48-206ENST00000464577 MARCH7Q9H992 704 aa7.09□□□□□ -1.27
USP48-206ENST00000464577 C3orf14Q9HBI5 128 aa7.09□□□□□ -1.27
USP48-206ENST00000464577 SARS2Q9NP81 518 aaKnown RBP7.09□□□□□ -1.27
USP48-206ENST00000464577 FARSBQ9NSD9 589 aaKnown RBP7.09□□□□□ -1.27
USP48-206ENST00000464577 OLA1Q9NTK5 396 aaKnown RBP7.09□□□□□ -1.27
USP48-206ENST00000464577 QPCTLQ9NXS2 382 aa7.09□□□□□ -1.27
USP48-206ENST00000464577 WWOXQ9NZC7 414 aa7.09□□□□□ -1.27
USP48-206ENST00000464577 TBC1D14Q9P2M4 693 aa7.09□□□□□ -1.27
USP48-206ENST00000464577 CRNNQ9UBG3 495 aaPredicted RBP7.09□□□□□ -1.27
USP48-206ENST00000464577 SPASTQ9UBP0 616 aa7.09□□□□□ -1.27
USP48-206ENST00000464577 UBA2Q9UBT2 640 aaPredicted RBP7.09□□□□□ -1.27
USP48-206ENST00000464577 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.09□□□□□ -1.27
USP48-206ENST00000464577 ST3GAL5Q9UNP4 418 aa7.09□□□□□ -1.27
USP48-206ENST00000464577 PCDHGB2Q9Y5G2 931 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms