RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 ITGADQ13349 1161 aa12.5□□□□□ -0.41
NUP58-206ENST00000463407 ENPP2Q13822 863 aa12.5□□□□□ -0.41
NUP58-206ENST00000463407 RAB33AQ14088 237 aa12.5□□□□□ -0.41
NUP58-206ENST00000463407 SCARB2Q14108 478 aa12.5□□□□□ -0.41
NUP58-206ENST00000463407 GFOD2Q3B7J2 385 aa12.5□□□□□ -0.41
NUP58-206ENST00000463407 IFI44LQ53G44 452 aa12.5□□□□□ -0.41
NUP58-206ENST00000463407 FRG2Q64ET8 278 aa12.5□□□□□ -0.41
NUP58-206ENST00000463407 SLC22A15Q8IZD6 547 aa12.5□□□□□ -0.41
NUP58-206ENST00000463407 FRG2BQ96QU4 278 aa12.5□□□□□ -0.41
NUP58-206ENST00000463407 PHF11Q9UIL8 331 aa12.5□□□□□ -0.41
NUP58-206ENST00000463407 FAM149AA5PLN7 773 aa12.5□□□□□ -0.41
NUP58-206ENST00000463407 SEC24AO95486 1093 aa12.5□□□□□ -0.41
NUP58-206ENST00000463407 WDR5P61964 334 aaKnown RBP12.5□□□□□ -0.41
NUP58-206ENST00000463407 CHRDL2Q6WN34 429 aa12.5□□□□□ -0.41
NUP58-206ENST00000463407 ARL10Q8N8L6 244 aa12.5□□□□□ -0.41
NUP58-206ENST00000463407 TRPV3Q8NET8 790 aa12.5□□□□□ -0.41
NUP58-206ENST00000463407 OR5AK3PQ8NH89 298 aa12.5□□□□□ -0.41
NUP58-206ENST00000463407 JPH3Q8WXH2 748 aaPredicted RBP12.5□□□□□ -0.41
NUP58-206ENST00000463407 MS4A4AQ96JQ5 239 aa12.5□□□□□ -0.41
NUP58-206ENST00000463407 GPATCH1Q9BRR8 931 aaKnown RBP12.5□□□□□ -0.41
NUP58-206ENST00000463407 SLC35A5Q9BS91 424 aa12.5□□□□□ -0.41
NUP58-206ENST00000463407 SDHAF3Q9NRP4 125 aa12.5□□□□□ -0.41
NUP58-206ENST00000463407 FTSJ1Q9UET6 329 aa12.5□□□□□ -0.41
NUP58-206ENST00000463407 IGLON5A6NGN9 336 aa12.49□□□□□ -0.41
NUP58-206ENST00000463407 CREB1P16220 341 aa12.49□□□□□ -0.41
NUP58-206ENST00000463407 MTPNP58546 118 aa12.49□□□□□ -0.41
NUP58-206ENST00000463407 RING1Q06587 406 aa12.49□□□□□ -0.41
NUP58-206ENST00000463407 BNIP1Q12981 228 aa12.49□□□□□ -0.41
NUP58-206ENST00000463407 ZNF311Q5JNZ3 666 aa12.49□□□□□ -0.41
NUP58-206ENST00000463407 CXorf57Q6NSI4 855 aaKnown RBP12.49□□□□□ -0.41
NUP58-206ENST00000463407 GOLGA7Q7Z5G4 137 aa12.49□□□□□ -0.41
NUP58-206ENST00000463407 SLC30A8Q8IWU4 369 aa12.49□□□□□ -0.41
NUP58-206ENST00000463407 FAM47BQ8NA70 645 aa12.49□□□□□ -0.41
NUP58-206ENST00000463407 AP3S1Q92572 193 aa12.49□□□□□ -0.41
NUP58-206ENST00000463407 HIST1H2AAQ96QV6 131 aa12.49□□□□□ -0.41
NUP58-206ENST00000463407 C11orf16Q9NQ32 467 aa12.49□□□□□ -0.41
NUP58-206ENST00000463407 FADS3Q9Y5Q0 445 aa12.49□□□□□ -0.41
NUP58-206ENST00000463407 LDB2O43679 373 aa12.49□□□□□ -0.41
NUP58-206ENST00000463407 TULP3O75386 442 aa12.49□□□□□ -0.41
NUP58-206ENST00000463407 AP2A2O94973 939 aa12.49□□□□□ -0.41
NUP58-206ENST00000463407 POU2F1P14859 743 aa12.49□□□□□ -0.41
NUP58-206ENST00000463407 SHMT2P34897 504 aa12.49□□□□□ -0.41
NUP58-206ENST00000463407 CAMK1Q14012 370 aa12.49□□□□□ -0.41
NUP58-206ENST00000463407 ZC3H3Q8IXZ2 948 aaKnown RBP12.49□□□□□ -0.41
NUP58-206ENST00000463407 PQLC3Q8N755 202 aa12.49□□□□□ -0.41
NUP58-206ENST00000463407 IFT27Q9BW83 186 aa12.49□□□□□ -0.41
NUP58-206ENST00000463407 NOL6Q9H6R4 1146 aaKnown RBP12.49□□□□□ -0.41
NUP58-206ENST00000463407 FZD3Q9NPG1 666 aa12.49□□□□□ -0.41
NUP58-206ENST00000463407 CTPS2Q9NRF8 586 aa12.49□□□□□ -0.41
NUP58-206ENST00000463407 GNEQ9Y223 722 aaKnown RBP12.49□□□□□ -0.41
NUP58-206ENST00000463407 CCDC88AQ3V6T2 1871 aa12.49□□□□□ -0.41
NUP58-206ENST00000463407 CPSF4LA6NMK7 179 aaKnown RBP12.49□□□□□ -0.41
NUP58-206ENST00000463407 HOXA11P31270 313 aaPredicted RBP12.49□□□□□ -0.41
NUP58-206ENST00000463407 GNALP38405 381 aa12.49□□□□□ -0.41
NUP58-206ENST00000463407 RBM44Q6ZP01 1051 aaKnown RBP12.49□□□□□ -0.41
NUP58-206ENST00000463407 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.49□□□□□ -0.41
NUP58-206ENST00000463407 H0YGN5 161 aa12.49□□□□□ -0.41
NUP58-206ENST00000463407 ADAMDEC1O15204 470 aa12.49□□□□□ -0.41
NUP58-206ENST00000463407 CDH1P12830 882 aa12.49□□□□□ -0.41
NUP58-206ENST00000463407 ERVK-8P63133 956 aa12.49□□□□□ -0.41
NUP58-206ENST00000463407 ZNF542PQ5EBM4 170 aa12.49□□□□□ -0.41
NUP58-206ENST00000463407 UBAP2Q5T6F2 1119 aaKnown RBP12.49□□□□□ -0.41
NUP58-206ENST00000463407 TSACCQ96A04 125 aaPredicted RBP12.49□□□□□ -0.41
NUP58-206ENST00000463407 LRIG1Q96JA1 1093 aa12.49□□□□□ -0.41
NUP58-206ENST00000463407 A8MT66 165 aa12.49□□□□□ -0.41
NUP58-206ENST00000463407 H7C0S8 307 aa12.49□□□□□ -0.41
NUP58-206ENST00000463407 ITM2AO43736 263 aa12.49□□□□□ -0.41
NUP58-206ENST00000463407 GADD45GO95257 159 aa12.49□□□□□ -0.41
NUP58-206ENST00000463407 AHSGP02765 367 aa12.49□□□□□ -0.41
NUP58-206ENST00000463407 C8orf89P0DMQ9 161 aa12.49□□□□□ -0.41
NUP58-206ENST00000463407 DEFB103AP81534 67 aa12.49□□□□□ -0.41
NUP58-206ENST00000463407 SP140Q13342 867 aa12.49□□□□□ -0.41
NUP58-206ENST00000463407 LPAL2Q16609 132 aa12.49□□□□□ -0.41
NUP58-206ENST00000463407 DPY19L1Q2PZI1 675 aa12.49□□□□□ -0.41
NUP58-206ENST00000463407 C6orf52Q5T4I8 152 aa12.49□□□□□ -0.41
NUP58-206ENST00000463407 AGTRAPQ6RW13 159 aa12.49□□□□□ -0.41
NUP58-206ENST00000463407 NXPE1Q8N323 547 aa12.49□□□□□ -0.41
NUP58-206ENST00000463407 LRTOMTQ8WZ04 291 aa12.49□□□□□ -0.41
NUP58-206ENST00000463407 EFHD2Q96C19 240 aaPredicted RBP12.49□□□□□ -0.41
NUP58-206ENST00000463407 TGM7Q96PF1 710 aa12.49□□□□□ -0.41
NUP58-206ENST00000463407 CLEC4MQ9H2X3 399 aaPredicted RBP12.49□□□□□ -0.41
NUP58-206ENST00000463407 MRM3Q9HC36 420 aaKnown RBP12.49□□□□□ -0.41
NUP58-206ENST00000463407 IL1RAPQ9NPH3 570 aa12.49□□□□□ -0.41
NUP58-206ENST00000463407 HCN2Q9UL51 889 aa12.49□□□□□ -0.41
NUP58-206ENST00000463407 LOC730098B7Z3J9 87 aa12.48□□□□□ -0.41
NUP58-206ENST00000463407 CHST10O43529 356 aa12.48□□□□□ -0.41
NUP58-206ENST00000463407 RENP00797 406 aa12.48□□□□□ -0.41
NUP58-206ENST00000463407 PRPS1L1P21108 318 aa12.48□□□□□ -0.41
NUP58-206ENST00000463407 VSX2P58304 361 aaPredicted RBP12.48□□□□□ -0.41
NUP58-206ENST00000463407 ZNF33AQ06730 810 aa12.48□□□□□ -0.41
NUP58-206ENST00000463407 OXR1Q8N573 874 aa12.48□□□□□ -0.41
NUP58-206ENST00000463407 IL22RA1Q8N6P7 574 aa12.48□□□□□ -0.41
NUP58-206ENST00000463407 XKR8Q9H6D3 395 aa12.48□□□□□ -0.41
NUP58-206ENST00000463407 DKKL1Q9UK85 242 aa12.48□□□□□ -0.41
NUP58-206ENST00000463407 OR6C74A6NCV1 312 aa12.48□□□□□ -0.41
NUP58-206ENST00000463407 GDF5P43026 501 aa12.48□□□□□ -0.41
NUP58-206ENST00000463407 CDKN1CP49918 316 aaPredicted RBP12.48□□□□□ -0.41
NUP58-206ENST00000463407 CST6Q15828 149 aa12.48□□□□□ -0.41
NUP58-206ENST00000463407 LCN1P1Q5VSP4 162 aa12.48□□□□□ -0.41
NUP58-206ENST00000463407 IQCHQ86VS3 1027 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms