RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 OSGIN2Q9Y236 505 aa14.7□□□□□ -0.06
SKA3-204ENST00000462482 KLK4Q9Y5K2 254 aa14.7□□□□□ -0.06
SKA3-204ENST00000462482 NFS1Q9Y697 457 aa14.7□□□□□ -0.06
SKA3-204ENST00000462482 UNC79Q9P2D8 2635 aa14.7□□□□□ -0.06
SKA3-204ENST00000462482 NSG1A0A0A6YYJ2 146 aa14.69□□□□□ -0.06
SKA3-204ENST00000462482 PRICKLE3O43900 615 aaPredicted RBP14.69□□□□□ -0.06
SKA3-204ENST00000462482 CCNDBP1O95273 360 aa14.69□□□□□ -0.06
SKA3-204ENST00000462482 VAPBO95292 243 aa14.69□□□□□ -0.06
SKA3-204ENST00000462482 ANXA5P08758 320 aa14.69□□□□□ -0.06
SKA3-204ENST00000462482 ZGLP1P0C6A0 271 aa14.69□□□□□ -0.06
SKA3-204ENST00000462482 CHRM3P20309 590 aa14.69□□□□□ -0.06
SKA3-204ENST00000462482 FDXRP22570 491 aa14.69□□□□□ -0.06
SKA3-204ENST00000462482 PSMB5P28074 263 aa14.69□□□□□ -0.06
SKA3-204ENST00000462482 RPL22P35268 128 aaKnown RBP14.69□□□□□ -0.06
SKA3-204ENST00000462482 ARG2P78540 354 aa14.69□□□□□ -0.06
SKA3-204ENST00000462482 KLC1Q07866 573 aa14.69□□□□□ -0.06
SKA3-204ENST00000462482 TSTA3Q13630 321 aaPredicted RBP14.69□□□□□ -0.06
SKA3-204ENST00000462482 CCNG2Q16589 344 aa14.69□□□□□ -0.06
SKA3-204ENST00000462482 ANKRD20A4Q4UJ75 823 aa14.69□□□□□ -0.06
SKA3-204ENST00000462482 FRMPD2BQ6IN97 320 aa14.69□□□□□ -0.06
SKA3-204ENST00000462482 RNF44Q7L0R7 432 aa14.69□□□□□ -0.06
SKA3-204ENST00000462482 TMEM151BQ8IW70 566 aa14.69□□□□□ -0.06
SKA3-204ENST00000462482 BCORP1Q8N888 145 aa14.69□□□□□ -0.06
SKA3-204ENST00000462482 OR2A1Q8NGT9 310 aa14.69□□□□□ -0.06
SKA3-204ENST00000462482 SMPDL3AQ92484 453 aa14.69□□□□□ -0.06
SKA3-204ENST00000462482 MAGEB10Q96LZ2 347 aaPredicted RBP14.69□□□□□ -0.06
SKA3-204ENST00000462482 TCF12Q99081 682 aa14.69□□□□□ -0.06
SKA3-204ENST00000462482 DPH7Q9BTV6 452 aa14.69□□□□□ -0.06
SKA3-204ENST00000462482 ACAT2Q9BWD1 397 aa14.69□□□□□ -0.06
SKA3-204ENST00000462482 RBSNQ9H1K0 784 aa14.69□□□□□ -0.06
SKA3-204ENST00000462482 ZNF160Q9HCG1 818 aa14.69□□□□□ -0.06
SKA3-204ENST00000462482 MRPS30Q9NP92 439 aaKnown RBP14.69□□□□□ -0.06
SKA3-204ENST00000462482 TREX1Q9NSU2 369 aa14.69□□□□□ -0.06
SKA3-204ENST00000462482 TSR3Q9UJK0 312 aaKnown RBP14.69□□□□□ -0.06
SKA3-204ENST00000462482 RUVBL2Q9Y230 463 aaKnown RBP14.69□□□□□ -0.06
SKA3-204ENST00000462482 VPS9D1Q9Y2B5 631 aa14.69□□□□□ -0.06
SKA3-204ENST00000462482 CSAG2Q9Y5P2 127 aa14.69□□□□□ -0.06
SKA3-204ENST00000462482 E5RI56 91 aa14.68□□□□□ -0.06
SKA3-204ENST00000462482 PCDH17O14917 1159 aa14.68□□□□□ -0.06
SKA3-204ENST00000462482 LRRTM2O43300 516 aa14.68□□□□□ -0.06
SKA3-204ENST00000462482 WFS1O76024 890 aa14.68□□□□□ -0.06
SKA3-204ENST00000462482 ESR1P03372 595 aa14.68□□□□□ -0.06
SKA3-204ENST00000462482 CATP04040 527 aaKnown RBP14.68□□□□□ -0.06
SKA3-204ENST00000462482 ZSCAN5DPP0CG00 497 aa14.68□□□□□ -0.06
SKA3-204ENST00000462482 MYBL2P10244 700 aa14.68□□□□□ -0.06
SKA3-204ENST00000462482 PAMP19021 973 aa14.68□□□□□ -0.06
SKA3-204ENST00000462482 NMBRP28336 390 aa14.68□□□□□ -0.06
SKA3-204ENST00000462482 ATP5DP30049 168 aa14.68□□□□□ -0.06
SKA3-204ENST00000462482 FMO4P31512 558 aa14.68□□□□□ -0.06
SKA3-204ENST00000462482 HSD17B2P37059 387 aa14.68□□□□□ -0.06
SKA3-204ENST00000462482 EMP2P54851 167 aa14.68□□□□□ -0.06
SKA3-204ENST00000462482 EMP3P54852 163 aa14.68□□□□□ -0.06
SKA3-204ENST00000462482 AP2B1P63010 937 aa14.68□□□□□ -0.06
SKA3-204ENST00000462482 CRADDP78560 199 aa14.68□□□□□ -0.06
SKA3-204ENST00000462482 SARNPP82979 210 aaKnown RBP14.68□□□□□ -0.06
SKA3-204ENST00000462482 CCSMST1Q4G0I0 132 aa14.68□□□□□ -0.06
SKA3-204ENST00000462482 NDUFAF7Q7L592 441 aa14.68□□□□□ -0.06
SKA3-204ENST00000462482 TMEM139Q8IV31 216 aa14.68□□□□□ -0.06
SKA3-204ENST00000462482 SLC34A3Q8N130 599 aa14.68□□□□□ -0.06
SKA3-204ENST00000462482 OR1N1Q8NGS0 311 aa14.68□□□□□ -0.06
SKA3-204ENST00000462482 OR9A1PQ8NGU1 263 aa14.68□□□□□ -0.06
SKA3-204ENST00000462482 RERGQ96A58 199 aaPredicted RBP14.68□□□□□ -0.06
SKA3-204ENST00000462482 MVB12AQ96EY5 273 aa14.68□□□□□ -0.06
SKA3-204ENST00000462482 OLAHQ9NV23 265 aa14.68□□□□□ -0.06
SKA3-204ENST00000462482 C14orf105Q9NVL8 296 aa14.68□□□□□ -0.06
SKA3-204ENST00000462482 TRPC4Q9UBN4 977 aa14.68□□□□□ -0.06
SKA3-204ENST00000462482 TEX15Q9BXT5 2789 aa14.68□□□□□ -0.06
SKA3-204ENST00000462482 ESPL1Q14674 2120 aa14.68□□□□□ -0.06
SKA3-204ENST00000462482 LOC105369274A0A096LPK9 316 aa14.67□□□□□ -0.06
SKA3-204ENST00000462482 LOC102723532A0A0G2JNH3 316 aa14.67□□□□□ -0.06
SKA3-204ENST00000462482 A0A0U1RQJ8 604 aa14.67□□□□□ -0.06
SKA3-204ENST00000462482 A0A1B0GUH1 482 aa14.67□□□□□ -0.06
SKA3-204ENST00000462482 OR2A25A4D2G3 310 aa14.67□□□□□ -0.06
SKA3-204ENST00000462482 TXNDC9O14530 226 aa14.67□□□□□ -0.06
SKA3-204ENST00000462482 HEXBP07686 556 aa14.67□□□□□ -0.06
SKA3-204ENST00000462482 PKMP14618 531 aaKnown RBP14.67□□□□□ -0.06
SKA3-204ENST00000462482 CDK16Q00536 496 aa14.67□□□□□ -0.06
SKA3-204ENST00000462482 DSG2Q14126 1118 aa14.67□□□□□ -0.06
SKA3-204ENST00000462482 NAA30Q147X3 362 aaPredicted RBP14.67□□□□□ -0.06
SKA3-204ENST00000462482 ARHGAP19Q14CB8 494 aa14.67□□□□□ -0.06
SKA3-204ENST00000462482 TTLL9Q3SXZ7 439 aa14.67□□□□□ -0.06
SKA3-204ENST00000462482 RPUSD3Q6P087 351 aaKnown RBP14.67□□□□□ -0.06
SKA3-204ENST00000462482 OR4N4Q8N0Y3 316 aa14.67□□□□□ -0.06
SKA3-204ENST00000462482 CSNK1A1LQ8N752 337 aa14.67□□□□□ -0.06
SKA3-204ENST00000462482 KIFC1Q9BW19 673 aa14.67□□□□□ -0.06
SKA3-204ENST00000462482 RUBCNLQ9H714 662 aa14.67□□□□□ -0.06
SKA3-204ENST00000462482 RIC8BQ9NVN3 520 aa14.67□□□□□ -0.06
SKA3-204ENST00000462482 ZKSCAN5Q9Y2L8 839 aa14.67□□□□□ -0.06
SKA3-204ENST00000462482 PCSK5Q92824 1860 aa14.67□□□□□ -0.06
SKA3-204ENST00000462482 MED13Q9UHV7 2174 aa14.67□□□□□ -0.06
SKA3-204ENST00000462482 UTP20O75691 2785 aaKnown RBP14.67□□□□□ -0.06
SKA3-204ENST00000462482 SPENQ96T58 3664 aaKnown RBP14.66□□□□□ -0.06
SKA3-204ENST00000462482 TRAV17A0A0B4J275 112 aa14.66□□□□□ -0.06
SKA3-204ENST00000462482 IDSB3KWA1 339 aa14.66□□□□□ -0.06
SKA3-204ENST00000462482 H0YGG7 62 aa14.66□□□□□ -0.06
SKA3-204ENST00000462482 MATN4O95460 622 aa14.66□□□□□ -0.06
SKA3-204ENST00000462482 SERPINA7P05543 415 aa14.66□□□□□ -0.06
SKA3-204ENST00000462482 MGAT1P26572 445 aa14.66□□□□□ -0.06
SKA3-204ENST00000462482 ARF3P61204 181 aaPredicted RBP14.66□□□□□ -0.06
SKA3-204ENST00000462482 VWA2Q5GFL6 755 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms