RNA–Protein interactions for RNA: ENST00000462335.1

PKP4-208, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-208ENST00000462335 STAG3L4Q8TBR4 150 aa9.21□□□□□ -0.94
PKP4-208ENST00000462335 ZNF480Q8WV37 535 aa9.21□□□□□ -0.94
PKP4-208ENST00000462335 EXT2Q93063 718 aa9.21□□□□□ -0.94
PKP4-208ENST00000462335 SCYL1Q96KG9 808 aa9.21□□□□□ -0.94
PKP4-208ENST00000462335 C17orf62Q9BQA9 187 aa9.21□□□□□ -0.94
PKP4-208ENST00000462335 DERL2Q9GZP9 239 aa9.21□□□□□ -0.94
PKP4-208ENST00000462335 ACSS3Q9H6R3 686 aa9.21□□□□□ -0.94
PKP4-208ENST00000462335 SIDT1Q9NXL6 827 aaKnown RBP9.21□□□□□ -0.94
PKP4-208ENST00000462335 EURLQ9NYK6 297 aa9.21□□□□□ -0.94
PKP4-208ENST00000462335 WWOXQ9NZC7 414 aa9.21□□□□□ -0.94
PKP4-208ENST00000462335 STOX2Q9P2F5 926 aaPredicted RBP9.21□□□□□ -0.94
PKP4-208ENST00000462335 KCND3Q9UK17 655 aa9.21□□□□□ -0.94
PKP4-208ENST00000462335 ADAMTS6Q9UKP5 1117 aa9.21□□□□□ -0.94
PKP4-208ENST00000462335 ACSL6Q9UKU0 697 aa9.21□□□□□ -0.94
PKP4-208ENST00000462335 NOVA2Q9UNW9 492 aaKnown RBP9.21□□□□□ -0.94
PKP4-208ENST00000462335 SRPK3Q9UPE1 567 aa9.21□□□□□ -0.94
PKP4-208ENST00000462335 MED16Q9Y2X0 877 aa9.21□□□□□ -0.94
PKP4-208ENST00000462335 ANGPTL3Q9Y5C1 460 aa9.21□□□□□ -0.94
PKP4-208ENST00000462335 CHD8Q9HCK8 2581 aa9.21□□□□□ -0.94
PKP4-208ENST00000462335 SPEGQ15772 3267 aa9.21□□□□□ -0.94
PKP4-208ENST00000462335 A0A0J9YVX5 310 aa9.2□□□□□ -0.94
PKP4-208ENST00000462335 IQANK1A0A1B0GTG1 560 aa9.2□□□□□ -0.94
PKP4-208ENST00000462335 KRT87PA6NCN2 255 aa9.2□□□□□ -0.94
PKP4-208ENST00000462335 NCF1BA6NI72 391 aaPredicted RBP9.2□□□□□ -0.94
PKP4-208ENST00000462335 EIF4E1BA6NMX2 242 aaKnown RBP9.2□□□□□ -0.94
PKP4-208ENST00000462335 SYCE1LA8MT33 242 aa9.2□□□□□ -0.94
PKP4-208ENST00000462335 NCF1CA8MVU1 366 aaPredicted RBP9.2□□□□□ -0.94
PKP4-208ENST00000462335 SUPT3HB4E1H0 165 aa9.2□□□□□ -0.94
PKP4-208ENST00000462335 E7ENX8 843 aa9.2□□□□□ -0.94
PKP4-208ENST00000462335 CDC7O00311 574 aa9.2□□□□□ -0.94
PKP4-208ENST00000462335 ZSCAN9O15535 394 aaPredicted RBP9.2□□□□□ -0.94
PKP4-208ENST00000462335 ZNF749O43361 778 aa9.2□□□□□ -0.94
PKP4-208ENST00000462335 SRPX2O60687 465 aaPredicted RBP9.2□□□□□ -0.94
PKP4-208ENST00000462335 SUPT3HO75486 399 aa9.2□□□□□ -0.94
PKP4-208ENST00000462335 CD63P08962 238 aa9.2□□□□□ -0.94
PKP4-208ENST00000462335 SNRPAP09012 282 aaKnown RBP9.2□□□□□ -0.94
PKP4-208ENST00000462335 LTA4HP09960 611 aaKnown RBP9.2□□□□□ -0.94
PKP4-208ENST00000462335 NCF1P14598 390 aaPredicted RBP9.2□□□□□ -0.94
PKP4-208ENST00000462335 PSMB5P28074 263 aa9.2□□□□□ -0.94
PKP4-208ENST00000462335 PGGT1BP53609 377 aa9.2□□□□□ -0.94
PKP4-208ENST00000462335 VSX2P58304 361 aaPredicted RBP9.2□□□□□ -0.94
PKP4-208ENST00000462335 TAP2Q03519 686 aa9.2□□□□□ -0.94
PKP4-208ENST00000462335 VAC14Q08AM6 782 aa9.2□□□□□ -0.94
PKP4-208ENST00000462335 IFFO1Q0D2I5 559 aa9.2□□□□□ -0.94
PKP4-208ENST00000462335 BMPR2Q13873 1038 aa9.2□□□□□ -0.94
PKP4-208ENST00000462335 MAP7Q14244 749 aa9.2□□□□□ -0.94
PKP4-208ENST00000462335 GRB7Q14451 532 aa9.2□□□□□ -0.94
PKP4-208ENST00000462335 EFTUD2Q15029 972 aaKnown RBP eCLIP9.2□□□□□ -0.94
PKP4-208ENST00000462335 TSNQ15631 228 aaKnown RBP9.2□□□□□ -0.94
PKP4-208ENST00000462335 DEFB110Q30KQ9 67 aa9.2□□□□□ -0.94
PKP4-208ENST00000462335 VASH2Q86V25 355 aa9.2□□□□□ -0.94
PKP4-208ENST00000462335 SPATA6LQ8N4H0 392 aa9.2□□□□□ -0.94
PKP4-208ENST00000462335 SNX31Q8N9S9 440 aa9.2□□□□□ -0.94
PKP4-208ENST00000462335 OR2A1Q8NGT9 310 aa9.2□□□□□ -0.94
PKP4-208ENST00000462335 OR1L3Q8NH93 324 aa9.2□□□□□ -0.94
PKP4-208ENST00000462335 NKD1Q969G9 470 aa9.2□□□□□ -0.94
PKP4-208ENST00000462335 PMEPA1Q969W9 287 aa9.2□□□□□ -0.94
PKP4-208ENST00000462335 FBXL8Q96CD0 374 aa9.2□□□□□ -0.94
PKP4-208ENST00000462335 ZNF501Q96CX3 271 aaPredicted RBP9.2□□□□□ -0.94
PKP4-208ENST00000462335 MTBPQ96DY7 904 aa9.2□□□□□ -0.94
PKP4-208ENST00000462335 PAFAH2Q99487 392 aa9.2□□□□□ -0.94
PKP4-208ENST00000462335 ARHGAP9Q9BRR9 750 aa9.2□□□□□ -0.94
PKP4-208ENST00000462335 YIPF2Q9BWQ6 316 aa9.2□□□□□ -0.94
PKP4-208ENST00000462335 CAPS2Q9BXY5 557 aa9.2□□□□□ -0.94
PKP4-208ENST00000462335 UNKQ9C0B0 810 aaKnown RBP9.2□□□□□ -0.94
PKP4-208ENST00000462335 CHRNA10Q9GZZ6 450 aa9.2□□□□□ -0.94
PKP4-208ENST00000462335 ANKMY1Q9P2S6 941 aa9.2□□□□□ -0.94
PKP4-208ENST00000462335 PILRAQ9UKJ1 303 aa9.2□□□□□ -0.94
PKP4-208ENST00000462335 PADI2Q9Y2J8 665 aa9.2□□□□□ -0.94
PKP4-208ENST00000462335 TMEM184BQ9Y519 407 aaPredicted RBP9.2□□□□□ -0.94
PKP4-208ENST00000462335 OARD1Q9Y530 152 aa9.2□□□□□ -0.94
PKP4-208ENST00000462335 KCNE2Q9Y6J6 123 aa9.2□□□□□ -0.94
PKP4-208ENST00000462335 AKAP13Q12802 2813 aa9.19□□□□□ -0.94
PKP4-208ENST00000462335 A0A096LPK6 155 aa9.19□□□□□ -0.94
PKP4-208ENST00000462335 ZNF891A8MT65 544 aaPredicted RBP9.19□□□□□ -0.94
PKP4-208ENST00000462335 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.19□□□□□ -0.94
PKP4-208ENST00000462335 H7BY64 318 aa9.19□□□□□ -0.94
PKP4-208ENST00000462335 MEN1O00255 615 aa9.19□□□□□ -0.94
PKP4-208ENST00000462335 CLGNO14967 610 aa9.19□□□□□ -0.94
PKP4-208ENST00000462335 WDR47O94967 919 aa9.19□□□□□ -0.94
PKP4-208ENST00000462335 CAPNS1P04632 268 aa9.19□□□□□ -0.94
PKP4-208ENST00000462335 SERPIND1P05546 499 aa9.19□□□□□ -0.94
PKP4-208ENST00000462335 TUBBP07437 444 aa9.19□□□□□ -0.94
PKP4-208ENST00000462335 ABHD2P08910 425 aa9.19□□□□□ -0.94
PKP4-208ENST00000462335 MSL3P1P0C860 447 aa9.19□□□□□ -0.94
PKP4-208ENST00000462335 GFAPP14136 432 aa9.19□□□□□ -0.94
PKP4-208ENST00000462335 CXCR2P25025 360 aa9.19□□□□□ -0.94
PKP4-208ENST00000462335 IMPA1P29218 277 aa9.19□□□□□ -0.94
PKP4-208ENST00000462335 PEBP1P30086 187 aaKnown RBP9.19□□□□□ -0.94
PKP4-208ENST00000462335 ARL1P40616 181 aaPredicted RBP9.19□□□□□ -0.94
PKP4-208ENST00000462335 SLC26A3P40879 764 aa9.19□□□□□ -0.94
PKP4-208ENST00000462335 CCR8P51685 355 aa9.19□□□□□ -0.94
PKP4-208ENST00000462335 TBPL1P62380 186 aa9.19□□□□□ -0.94
PKP4-208ENST00000462335 TIAL1Q01085 375 aaKnown RBP eCLIP9.19□□□□□ -0.949e-7■■■■□ 22.7
PKP4-208ENST00000462335 TLE3Q04726 772 aa9.19□□□□□ -0.94
PKP4-208ENST00000462335 NDUFA9Q16795 377 aa9.19□□□□□ -0.94
PKP4-208ENST00000462335 COL28A1Q2UY09 1125 aa9.19□□□□□ -0.94
PKP4-208ENST00000462335 WASHC2DQ5SRD0 308 aa9.19□□□□□ -0.94
PKP4-208ENST00000462335 MLIPQ5VWP3 458 aa9.19□□□□□ -0.94
PKP4-208ENST00000462335 SULT1C3Q6IMI6 304 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms