RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 HCN3Q9P1Z3 774 aa4.82□□□□□ -1.64
COPS3-204ENST00000462236 KLHL13Q9P2N7 655 aa4.82□□□□□ -1.64
COPS3-204ENST00000462236 AGO1Q9UL18 857 aaKnown RBP4.82□□□□□ -1.64
COPS3-204ENST00000462236 NOL7Q9UMY1 257 aaKnown RBP4.82□□□□□ -1.64
COPS3-204ENST00000462236 SATB2Q9UPW6 733 aa4.82□□□□□ -1.64
COPS3-204ENST00000462236 OSGIN2Q9Y236 505 aa4.82□□□□□ -1.64
COPS3-204ENST00000462236 CLDN16Q9Y5I7 305 aa4.82□□□□□ -1.64
COPS3-204ENST00000462236 RTTNQ86VV8 2226 aa4.81□□□□□ -1.64
COPS3-204ENST00000462236 ATP8B3O60423 1300 aa4.81□□□□□ -1.64
COPS3-204ENST00000462236 PIKFYVEQ9Y2I7 2098 aa4.81□□□□□ -1.64
COPS3-204ENST00000462236 NF1P21359 2839 aa4.81□□□□□ -1.64
COPS3-204ENST00000462236 ACANP16112 2415 aa4.81□□□□□ -1.64
COPS3-204ENST00000462236 GAGE10A6NGK3 116 aa4.81□□□□□ -1.64
COPS3-204ENST00000462236 ENO4A6NNW6 628 aa4.81□□□□□ -1.64
COPS3-204ENST00000462236 A8MXQ7 604 aa4.81□□□□□ -1.64
COPS3-204ENST00000462236 MASP2O00187 686 aa4.81□□□□□ -1.64
COPS3-204ENST00000462236 MID1O15344 667 aa4.81□□□□□ -1.64
COPS3-204ENST00000462236 TP73O15350 636 aa4.81□□□□□ -1.64
COPS3-204ENST00000462236 TNNC2P02585 160 aa4.81□□□□□ -1.64
COPS3-204ENST00000462236 DNTTP04053 509 aa4.81□□□□□ -1.64
COPS3-204ENST00000462236 CHRM4P08173 479 aa4.81□□□□□ -1.64
COPS3-204ENST00000462236 LYL1P12980 280 aa4.81□□□□□ -1.64
COPS3-204ENST00000462236 RARGP13631 454 aa4.81□□□□□ -1.64
COPS3-204ENST00000462236 KELP23276 732 aa4.81□□□□□ -1.64
COPS3-204ENST00000462236 DGKAP23743 735 aa4.81□□□□□ -1.64
COPS3-204ENST00000462236 MPGP29372 298 aa4.81□□□□□ -1.64
COPS3-204ENST00000462236 TYK2P29597 1187 aa4.81□□□□□ -1.64
COPS3-204ENST00000462236 CORO1AP31146 461 aaKnown RBP4.81□□□□□ -1.64
COPS3-204ENST00000462236 HOXD13P35453 343 aa4.81□□□□□ -1.64
COPS3-204ENST00000462236 DRD3P35462 400 aa4.81□□□□□ -1.64
COPS3-204ENST00000462236 MTNR1AP48039 350 aa4.81□□□□□ -1.64
COPS3-204ENST00000462236 CYP2J2P51589 502 aa4.81□□□□□ -1.64
COPS3-204ENST00000462236 SSBP2P81877 361 aaPredicted RBP4.81□□□□□ -1.64
COPS3-204ENST00000462236 COG7P83436 770 aa4.81□□□□□ -1.64
COPS3-204ENST00000462236 GOLGA8DPQ0D2H9 430 aa4.81□□□□□ -1.64
COPS3-204ENST00000462236 ZRSR1Q15695 479 aaKnown RBP4.81□□□□□ -1.64
COPS3-204ENST00000462236 C9orf64Q5T6V5 341 aa4.81□□□□□ -1.64
COPS3-204ENST00000462236 MORN5Q5VZ52 161 aa4.81□□□□□ -1.64
COPS3-204ENST00000462236 NAPEPLDQ6IQ20 393 aa4.81□□□□□ -1.64
COPS3-204ENST00000462236 CLEC20AQ6ZU45 233 aa4.81□□□□□ -1.64
COPS3-204ENST00000462236 CHST9Q7L1S5 443 aa4.81□□□□□ -1.64
COPS3-204ENST00000462236 CCDC186Q7Z3E2 898 aa4.81□□□□□ -1.64
COPS3-204ENST00000462236 YTHDF3Q7Z739 585 aaKnown RBP4.81□□□□□ -1.64
COPS3-204ENST00000462236 CBWD2Q8IUF1 395 aa4.81□□□□□ -1.64
COPS3-204ENST00000462236 FAM185AQ8N0U4 392 aa4.81□□□□□ -1.64
COPS3-204ENST00000462236 AADATQ8N5Z0 425 aa4.81□□□□□ -1.64
COPS3-204ENST00000462236 KDM1BQ8NB78 822 aa4.81□□□□□ -1.64
COPS3-204ENST00000462236 TNIP2Q8NFZ5 429 aa4.81□□□□□ -1.64
COPS3-204ENST00000462236 RFWD2Q8NHY2 731 aa4.81□□□□□ -1.64
COPS3-204ENST00000462236 MPLKIPQ8TAP9 179 aa4.81□□□□□ -1.64
COPS3-204ENST00000462236 NTN5Q8WTR8 489 aaPredicted RBP4.81□□□□□ -1.64
COPS3-204ENST00000462236 WDR83Q9BRX9 315 aaKnown RBP4.81□□□□□ -1.64
COPS3-204ENST00000462236 FUZQ9BT04 418 aa4.81□□□□□ -1.64
COPS3-204ENST00000462236 FUCA2Q9BTY2 467 aa4.81□□□□□ -1.64
COPS3-204ENST00000462236 DCLK3Q9C098 648 aa4.81□□□□□ -1.64
COPS3-204ENST00000462236 SDCBP2Q9H190 292 aa4.81□□□□□ -1.64
COPS3-204ENST00000462236 SNX25Q9H3E2 840 aa4.81□□□□□ -1.64
COPS3-204ENST00000462236 SMYD3Q9H7B4 428 aa4.81□□□□□ -1.64
COPS3-204ENST00000462236 TMEM45AQ9NWC5 275 aa4.81□□□□□ -1.64
COPS3-204ENST00000462236 FBXL12Q9NXK8 326 aa4.81□□□□□ -1.64
COPS3-204ENST00000462236 ALKBH4Q9NXW9 302 aa4.81□□□□□ -1.64
COPS3-204ENST00000462236 CLIC5Q9NZA1 410 aa4.81□□□□□ -1.64
COPS3-204ENST00000462236 IFT80Q9P2H3 777 aaPredicted RBP4.81□□□□□ -1.64
COPS3-204ENST00000462236 SUN2Q9UH99 717 aa4.81□□□□□ -1.64
COPS3-204ENST00000462236 INTS6Q9UL03 887 aaKnown RBP4.81□□□□□ -1.64
COPS3-204ENST00000462236 EXOC7Q9UPT5 735 aa4.81□□□□□ -1.64
COPS3-204ENST00000462236 FRMD4BQ9Y2L6 1034 aa4.81□□□□□ -1.64
COPS3-204ENST00000462236 KIF3AQ9Y496 699 aa4.81□□□□□ -1.64
COPS3-204ENST00000462236 ABCA2Q9BZC7 2435 aa4.81□□□□□ -1.64
COPS3-204ENST00000462236 OR6C68A6NDL8 312 aa4.8□□□□□ -1.64
COPS3-204ENST00000462236 LRRC72A6NJI9 287 aa4.8□□□□□ -1.64
COPS3-204ENST00000462236 ZNF233A6NK53 670 aa4.8□□□□□ -1.64
COPS3-204ENST00000462236 CGB1A6NKQ9 187 aa4.8□□□□□ -1.64
COPS3-204ENST00000462236 FOXO6A8MYZ6 492 aa4.8□□□□□ -1.64
COPS3-204ENST00000462236 J3KRW8 73 aa4.8□□□□□ -1.64
COPS3-204ENST00000462236 MAGEC1O60732 1142 aa4.8□□□□□ -1.64
COPS3-204ENST00000462236 TBCAO75347 108 aaKnown RBP4.8□□□□□ -1.64
COPS3-204ENST00000462236 SFTPCP11686 197 aa4.8□□□□□ -1.64
COPS3-204ENST00000462236 FCGR2AP12318 317 aa4.8□□□□□ -1.64
COPS3-204ENST00000462236 CCDC130P13994 396 aa4.8□□□□□ -1.64
COPS3-204ENST00000462236 GOT1P17174 413 aa4.8□□□□□ -1.64
COPS3-204ENST00000462236 GAP43P17677 238 aa4.8□□□□□ -1.64
COPS3-204ENST00000462236 CD53P19397 219 aa4.8□□□□□ -1.64
COPS3-204ENST00000462236 NUDT1P36639 197 aa4.8□□□□□ -1.64
COPS3-204ENST00000462236 SKIV2L2P42285 1042 aaKnown RBP4.8□□□□□ -1.64
COPS3-204ENST00000462236 MAP3K7CLP57077 242 aa4.8□□□□□ -1.64
COPS3-204ENST00000462236 MYL6P60660 151 aa4.8□□□□□ -1.64
COPS3-204ENST00000462236 HMGN5P82970 282 aaKnown RBP4.8□□□□□ -1.64
COPS3-204ENST00000462236 SRSF4Q08170 494 aaKnown RBP4.8□□□□□ -1.64
COPS3-204ENST00000462236 SRSF6Q13247 344 aaKnown RBP4.8□□□□□ -1.64
COPS3-204ENST00000462236 ALCAMQ13740 583 aa4.8□□□□□ -1.64
COPS3-204ENST00000462236 PSMD6Q15008 389 aa4.8□□□□□ -1.64
COPS3-204ENST00000462236 CST6Q15828 149 aa4.8□□□□□ -1.64
COPS3-204ENST00000462236 HNRNPA1L2Q32P51 320 aaKnown RBP4.8□□□□□ -1.64
COPS3-204ENST00000462236 RILPL1Q5EBL4 403 aa4.8□□□□□ -1.64
COPS3-204ENST00000462236 C10orf120Q5SQS8 335 aa4.8□□□□□ -1.64
COPS3-204ENST00000462236 TMEM268Q5VZI3 342 aa4.8□□□□□ -1.64
COPS3-204ENST00000462236 HIST2H2BCQ6DN03 193 aa4.8□□□□□ -1.64
COPS3-204ENST00000462236 BHLHA9Q7RTU4 235 aa4.8□□□□□ -1.64
COPS3-204ENST00000462236 TRIM69Q86WT6 500 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms