RNA–Protein interactions for RNA: ENST00000460231.5

PCNP-202, Transcript of PEST proteolytic signal containing nuclear protein, humanhuman

TSL 1 (best)

Gene PCNP, Length 2,165 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNP-202ENST00000460231 SIKE1Q9BRV8 207 aa13.83□□□□□ -0.19
PCNP-202ENST00000460231 SLC40A1Q9NP59 571 aa13.83□□□□□ -0.19
PCNP-202ENST00000460231 CCDC177Q9NQR7 707 aaPredicted RBP13.83□□□□□ -0.19
PCNP-202ENST00000460231 MDC1Q14676 2089 aaKnown RBP13.83□□□□□ -0.2
PCNP-202ENST00000460231 PABPN1LA6NDY0 278 aaKnown RBP13.83□□□□□ -0.2
PCNP-202ENST00000460231 TRPC5OSA6NMA1 111 aa13.83□□□□□ -0.2
PCNP-202ENST00000460231 H7BY64 318 aa13.83□□□□□ -0.2
PCNP-202ENST00000460231 BCAT2O15382 392 aaPredicted RBP13.83□□□□□ -0.2
PCNP-202ENST00000460231 CSF2P04141 144 aa13.83□□□□□ -0.2
PCNP-202ENST00000460231 HMOX2P30519 316 aa13.83□□□□□ -0.2
PCNP-202ENST00000460231 PKLRP30613 574 aa13.83□□□□□ -0.2
PCNP-202ENST00000460231 ILF3Q12906 894 aaKnown RBP eCLIP13.83□□□□□ -0.2
PCNP-202ENST00000460231 KLF10Q13118 480 aa13.83□□□□□ -0.2
PCNP-202ENST00000460231 CCDC6Q16204 474 aa13.83□□□□□ -0.2
PCNP-202ENST00000460231 KIF19Q2TAC6 998 aa13.83□□□□□ -0.2
PCNP-202ENST00000460231 DEFB133Q30KQ1 61 aa13.83□□□□□ -0.2
PCNP-202ENST00000460231 C6orf136Q5SQH8 315 aa13.83□□□□□ -0.2
PCNP-202ENST00000460231 PRAMEF13Q5VWM6 474 aa13.83□□□□□ -0.2
PCNP-202ENST00000460231 GK5Q6ZS86 529 aa13.83□□□□□ -0.2
PCNP-202ENST00000460231 VN1R5Q7Z5H4 357 aa13.83□□□□□ -0.2
PCNP-202ENST00000460231 TRIM73Q86UV7 250 aa13.83□□□□□ -0.2
PCNP-202ENST00000460231 FUNDC1Q8IVP5 155 aa13.83□□□□□ -0.2
PCNP-202ENST00000460231 FAM46DQ8NEK8 389 aa13.83□□□□□ -0.2
PCNP-202ENST00000460231 CEP70Q8NHQ1 597 aa13.83□□□□□ -0.2
PCNP-202ENST00000460231 WDR20Q8TBZ3 569 aa13.83□□□□□ -0.2
PCNP-202ENST00000460231 ACTRT2Q8TDY3 377 aa13.83□□□□□ -0.2
PCNP-202ENST00000460231 PRAP1Q96NZ9 151 aa13.83□□□□□ -0.2
PCNP-202ENST00000460231 FCRL4Q96PJ5 515 aa13.83□□□□□ -0.2
PCNP-202ENST00000460231 KLHL25Q9H0H3 589 aa13.83□□□□□ -0.2
PCNP-202ENST00000460231 SMOC1Q9H4F8 434 aa13.83□□□□□ -0.2
PCNP-202ENST00000460231 TRPS1Q9UHF7 1281 aa13.83□□□□□ -0.2
PCNP-202ENST00000460231 SNX11Q9Y5W9 270 aa13.83□□□□□ -0.2
PCNP-202ENST00000460231 SPTBP11277 2137 aa13.83□□□□□ -0.2
PCNP-202ENST00000460231 RP1P56715 2156 aa13.82□□□□□ -0.2
PCNP-202ENST00000460231 YY2O15391 372 aa13.82□□□□□ -0.2
PCNP-202ENST00000460231 PRICKLE3O43900 615 aaPredicted RBP13.82□□□□□ -0.2
PCNP-202ENST00000460231 ZFP36L2P47974 494 aaKnown RBP13.82□□□□□ -0.2
PCNP-202ENST00000460231 KCNJ2P63252 427 aa13.82□□□□□ -0.2
PCNP-202ENST00000460231 LRP8Q14114 963 aa13.82□□□□□ -0.2
PCNP-202ENST00000460231 SHBQ15464 509 aa13.82□□□□□ -0.2
PCNP-202ENST00000460231 LACTB2Q53H82 288 aaPredicted RBP13.82□□□□□ -0.2
PCNP-202ENST00000460231 ACAD11Q709F0 780 aa13.82□□□□□ -0.2
PCNP-202ENST00000460231 DGLUCYQ7Z3D6 616 aa13.82□□□□□ -0.2
PCNP-202ENST00000460231 LMX1AQ8TE12 382 aa13.82□□□□□ -0.2
PCNP-202ENST00000460231 ATL1Q8WXF7 558 aa13.82□□□□□ -0.2
PCNP-202ENST00000460231 APIPQ96GX9 242 aa13.82□□□□□ -0.2
PCNP-202ENST00000460231 PLCD4Q9BRC7 762 aa13.82□□□□□ -0.2
PCNP-202ENST00000460231 ACTL8Q9H568 366 aa13.82□□□□□ -0.2
PCNP-202ENST00000460231 STN1Q9H668 368 aaKnown RBP13.82□□□□□ -0.2
PCNP-202ENST00000460231 BAIAP2L1Q9UHR4 511 aa13.82□□□□□ -0.2
PCNP-202ENST00000460231 MAGEB17A8MXT2 336 aa13.82□□□□□ -0.2
PCNP-202ENST00000460231 SAP18O00422 153 aaKnown RBP13.82□□□□□ -0.2
PCNP-202ENST00000460231 GIPC1O14908 333 aa13.82□□□□□ -0.2
PCNP-202ENST00000460231 LCMT2O60294 686 aaKnown RBP13.82□□□□□ -0.2
PCNP-202ENST00000460231 UNC5CO95185 931 aa13.82□□□□□ -0.2
PCNP-202ENST00000460231 B3GALT4O96024 378 aa13.82□□□□□ -0.2
PCNP-202ENST00000460231 JUPP14923 745 aa13.82□□□□□ -0.2
PCNP-202ENST00000460231 NME1P15531 152 aaKnown RBP13.82□□□□□ -0.2
PCNP-202ENST00000460231 PIK3R1P27986 724 aa13.82□□□□□ -0.2
PCNP-202ENST00000460231 IL12AP29459 219 aa13.82□□□□□ -0.2
PCNP-202ENST00000460231 RAB28P51157 221 aa13.82□□□□□ -0.2
PCNP-202ENST00000460231 PTK2BQ14289 1009 aa13.82□□□□□ -0.2
PCNP-202ENST00000460231 SLBPQ14493 270 aaKnown RBP eCLIP13.82□□□□□ -0.2
PCNP-202ENST00000460231 KRT33BQ14525 404 aa13.82□□□□□ -0.2
PCNP-202ENST00000460231 PLK5Q496M5 336 aa13.82□□□□□ -0.2
PCNP-202ENST00000460231 PMS2CLQ68D20 193 aa13.82□□□□□ -0.2
PCNP-202ENST00000460231 YTHDF3Q7Z739 585 aaKnown RBP13.82□□□□□ -0.2
PCNP-202ENST00000460231 ADGRF3Q8IZF5 1079 aa13.82□□□□□ -0.2
PCNP-202ENST00000460231 SHISA5Q8N114 240 aa13.82□□□□□ -0.2
PCNP-202ENST00000460231 ANKRD53Q8N9V6 530 aa13.82□□□□□ -0.2
PCNP-202ENST00000460231 OR7G3Q8NG95 312 aa13.82□□□□□ -0.2
PCNP-202ENST00000460231 FLVCR1-AS1Q8TAF5 88 aa13.82□□□□□ -0.2
PCNP-202ENST00000460231 UTP4Q969X6 686 aaKnown RBP13.82□□□□□ -0.2
PCNP-202ENST00000460231 CCDC28BQ9BUN5 200 aa13.82□□□□□ -0.2
PCNP-202ENST00000460231 TBC1D10AQ9BXI6 508 aa13.82□□□□□ -0.2
PCNP-202ENST00000460231 KIR3DX1Q9H7L2 352 aa13.82□□□□□ -0.2
PCNP-202ENST00000460231 IL21RQ9HBE5 538 aa13.82□□□□□ -0.2
PCNP-202ENST00000460231 SLC6A20Q9NP91 592 aa13.82□□□□□ -0.2
PCNP-202ENST00000460231 DLGAP4Q9Y2H0 992 aa13.82□□□□□ -0.2
PCNP-202ENST00000460231 UBDO15205 165 aa13.81□□□□□ -0.2
PCNP-202ENST00000460231 PPM1DO15297 605 aa13.81□□□□□ -0.2
PCNP-202ENST00000460231 ULK1O75385 1050 aa13.81□□□□□ -0.2
PCNP-202ENST00000460231 CTSEP14091 401 aa13.81□□□□□ -0.2
PCNP-202ENST00000460231 GNAZP19086 355 aa13.81□□□□□ -0.2
PCNP-202ENST00000460231 TACR1P25103 407 aa13.81□□□□□ -0.2
PCNP-202ENST00000460231 LSSP48449 732 aa13.81□□□□□ -0.2
PCNP-202ENST00000460231 UBE2IP63279 158 aaKnown RBP13.81□□□□□ -0.2
PCNP-202ENST00000460231 PTGR1Q14914 329 aa13.81□□□□□ -0.2
PCNP-202ENST00000460231 KIAA0040Q15053 153 aa13.81□□□□□ -0.2
PCNP-202ENST00000460231 METTL2BQ6P1Q9 378 aaKnown RBP13.81□□□□□ -0.2
PCNP-202ENST00000460231 WASH2PQ6VEQ5 465 aa13.81□□□□□ -0.2
PCNP-202ENST00000460231 WDR5BQ86VZ2 330 aa13.81□□□□□ -0.2
PCNP-202ENST00000460231 FAM129CQ86XR2 697 aa13.81□□□□□ -0.2
PCNP-202ENST00000460231 EFCAB3Q8N7B9 438 aa13.81□□□□□ -0.2
PCNP-202ENST00000460231 DTWD2Q8NBA8 298 aa13.81□□□□□ -0.2
PCNP-202ENST00000460231 ZNF548Q8NEK5 533 aaPredicted RBP13.81□□□□□ -0.2
PCNP-202ENST00000460231 CLHC1Q8NHS4 586 aa13.81□□□□□ -0.2
PCNP-202ENST00000460231 SLC5A11Q8WWX8 675 aa13.81□□□□□ -0.2
PCNP-202ENST00000460231 SELENOMQ8WWX9 145 aa13.81□□□□□ -0.2
PCNP-202ENST00000460231 FAR2Q96K12 515 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms