RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 DSCR3O14972 297 aa15.44■□□□□ 0.06
COL7A1-203ENST00000459756 TP73O15350 636 aa15.44■□□□□ 0.06
COL7A1-203ENST00000459756 CCNDBP1O95273 360 aa15.44■□□□□ 0.06
COL7A1-203ENST00000459756 SYF2O95926 243 aaKnown RBP15.44■□□□□ 0.06
COL7A1-203ENST00000459756 C8GP07360 202 aa15.44■□□□□ 0.06
COL7A1-203ENST00000459756 ALAS2P22557 587 aa15.44■□□□□ 0.06
COL7A1-203ENST00000459756 RPL21P46778 160 aaKnown RBP15.44■□□□□ 0.06
COL7A1-203ENST00000459756 RGS4P49798 205 aa15.44■□□□□ 0.06
COL7A1-203ENST00000459756 TIAL1Q01085 375 aaKnown RBP eCLIP15.44■□□□□ 0.06
COL7A1-203ENST00000459756 TAP2Q03519 686 aa15.44■□□□□ 0.06
COL7A1-203ENST00000459756 PRDX1Q06830 199 aaKnown RBP15.44■□□□□ 0.06
COL7A1-203ENST00000459756 FAM214AQ32MH5 1076 aa15.44■□□□□ 0.06
COL7A1-203ENST00000459756 TEDDM1Q5T9Z0 273 aa15.44■□□□□ 0.06
COL7A1-203ENST00000459756 SUSD1Q6UWL2 747 aa15.44■□□□□ 0.06
COL7A1-203ENST00000459756 TTLL10Q6ZVT0 673 aa15.44■□□□□ 0.06
COL7A1-203ENST00000459756 UBE2R2Q712K3 238 aaPredicted RBP15.44■□□□□ 0.06
COL7A1-203ENST00000459756 RNF44Q7L0R7 432 aa15.44■□□□□ 0.06
COL7A1-203ENST00000459756 PIWIL4Q7Z3Z4 852 aaKnown RBP15.44■□□□□ 0.06
COL7A1-203ENST00000459756 PTRH1Q86Y79 214 aaKnown RBP15.44■□□□□ 0.06
COL7A1-203ENST00000459756 RAB43Q86YS6 212 aa15.44■□□□□ 0.06
COL7A1-203ENST00000459756 TTC29Q8NA56 475 aaPredicted RBP15.44■□□□□ 0.06
COL7A1-203ENST00000459756 EEF1AKMT1Q8WVE0 214 aa15.44■□□□□ 0.06
COL7A1-203ENST00000459756 WDR83Q9BRX9 315 aaKnown RBP15.44■□□□□ 0.06
COL7A1-203ENST00000459756 ING2Q9H160 280 aa15.44■□□□□ 0.06
COL7A1-203ENST00000459756 SLC6A20Q9NP91 592 aa15.44■□□□□ 0.06
COL7A1-203ENST00000459756 MRPS30Q9NP92 439 aaKnown RBP15.44■□□□□ 0.06
COL7A1-203ENST00000459756 CUTCQ9NTM9 273 aa15.44■□□□□ 0.06
COL7A1-203ENST00000459756 UTP6Q9NYH9 597 aaKnown RBP15.44■□□□□ 0.06
COL7A1-203ENST00000459756 CORO1CQ9ULV4 474 aaPredicted RBP15.44■□□□□ 0.06
COL7A1-203ENST00000459756 A0A0J9YVX5 310 aa15.43■□□□□ 0.06
COL7A1-203ENST00000459756 FAM187AA6NFU0 413 aa15.43■□□□□ 0.06
COL7A1-203ENST00000459756 DNAJB5O75953 348 aa15.43■□□□□ 0.06
COL7A1-203ENST00000459756 ONECUT2O95948 504 aa15.43■□□□□ 0.06
COL7A1-203ENST00000459756 PIM1P11309 404 aaPredicted RBP15.43■□□□□ 0.06
COL7A1-203ENST00000459756 FOLR3P41439 243 aa15.43■□□□□ 0.06
COL7A1-203ENST00000459756 CDKN2DP55273 166 aa15.43■□□□□ 0.06
COL7A1-203ENST00000459756 VSX2P58304 361 aaPredicted RBP15.43■□□□□ 0.06
COL7A1-203ENST00000459756 CBLBQ13191 982 aa15.43■□□□□ 0.06
COL7A1-203ENST00000459756 SP140Q13342 867 aa15.43■□□□□ 0.06
COL7A1-203ENST00000459756 TSTA3Q13630 321 aaPredicted RBP15.43■□□□□ 0.06
COL7A1-203ENST00000459756 SSPNQ14714 243 aa15.43■□□□□ 0.06
COL7A1-203ENST00000459756 WASHC2DQ5SRD0 308 aa15.43■□□□□ 0.06
COL7A1-203ENST00000459756 RBM20Q5T481 1227 aaKnown RBP15.43■□□□□ 0.06
COL7A1-203ENST00000459756 ICE2Q659A1 982 aa15.43■□□□□ 0.06
COL7A1-203ENST00000459756 CPZQ66K79 652 aa15.43■□□□□ 0.06
COL7A1-203ENST00000459756 MRPL14Q6P1L8 145 aaKnown RBP15.43■□□□□ 0.06
COL7A1-203ENST00000459756 TRMT10BQ6PF06 316 aaKnown RBP15.43■□□□□ 0.06
COL7A1-203ENST00000459756 MAATS1Q7Z4T9 603 aa15.43■□□□□ 0.06
COL7A1-203ENST00000459756 SPNS2Q8IVW8 549 aa15.43■□□□□ 0.06
COL7A1-203ENST00000459756 PALM2Q8IXS6 379 aa15.43■□□□□ 0.06
COL7A1-203ENST00000459756 SPATA4Q8NEY3 305 aa15.43■□□□□ 0.06
COL7A1-203ENST00000459756 OR2Y1Q8NGV0 311 aa15.43■□□□□ 0.06
COL7A1-203ENST00000459756 MCOLN3Q8TDD5 553 aa15.43■□□□□ 0.06
COL7A1-203ENST00000459756 FKBP10Q96AY3 582 aa15.43■□□□□ 0.06
COL7A1-203ENST00000459756 IP6K3Q96PC2 410 aa15.43■□□□□ 0.06
COL7A1-203ENST00000459756 ZFYVE21Q9BQ24 234 aa15.43■□□□□ 0.06
COL7A1-203ENST00000459756 PLCD4Q9BRC7 762 aa15.43■□□□□ 0.06
COL7A1-203ENST00000459756 TRIM55Q9BYV6 548 aa15.43■□□□□ 0.06
COL7A1-203ENST00000459756 ACSS2Q9NR19 701 aa15.43■□□□□ 0.06
COL7A1-203ENST00000459756 TAC3Q9UHF0 121 aa15.43■□□□□ 0.06
COL7A1-203ENST00000459756 ANAPC2Q9UJX6 822 aa15.43■□□□□ 0.06
COL7A1-203ENST00000459756 TP53TG5Q9Y2B4 290 aa15.43■□□□□ 0.06
COL7A1-203ENST00000459756 SNX24Q9Y343 169 aa15.43■□□□□ 0.06
COL7A1-203ENST00000459756 PTRH2Q9Y3E5 179 aaKnown RBP15.43■□□□□ 0.06
COL7A1-203ENST00000459756 TENM4Q6N022 2769 aa15.43■□□□□ 0.06
COL7A1-203ENST00000459756 HYKKA2RU49 373 aa15.42■□□□□ 0.06
COL7A1-203ENST00000459756 E7ESA3 106 aa15.42■□□□□ 0.06
COL7A1-203ENST00000459756 SLC16A5O15375 505 aa15.42■□□□□ 0.06
COL7A1-203ENST00000459756 ITGAXP20702 1163 aa15.42■□□□□ 0.06
COL7A1-203ENST00000459756 RRADP55042 308 aa15.42■□□□□ 0.06
COL7A1-203ENST00000459756 YBX1P67809 324 aaKnown RBP15.42■□□□□ 0.06
COL7A1-203ENST00000459756 ABATP80404 500 aa15.42■□□□□ 0.06
COL7A1-203ENST00000459756 RELAQ04206 551 aa15.42■□□□□ 0.06
COL7A1-203ENST00000459756 PDIA2Q13087 525 aaKnown RBP15.42■□□□□ 0.06
COL7A1-203ENST00000459756 CHAF1BQ13112 559 aa15.42■□□□□ 0.06
COL7A1-203ENST00000459756 SLC9A5Q14940 896 aa15.42■□□□□ 0.06
COL7A1-203ENST00000459756 FRMPD2BQ6IN97 320 aa15.42■□□□□ 0.06
COL7A1-203ENST00000459756 FBXO42Q6P3S6 717 aa15.42■□□□□ 0.06
COL7A1-203ENST00000459756 PAQR3Q6TCH7 311 aa15.42■□□□□ 0.06
COL7A1-203ENST00000459756 ASB18Q6ZVZ8 466 aa15.42■□□□□ 0.06
COL7A1-203ENST00000459756 MED25Q71SY5 747 aa15.42■□□□□ 0.06
COL7A1-203ENST00000459756 ANKMY2Q8IV38 441 aa15.42■□□□□ 0.06
COL7A1-203ENST00000459756 MYO1HQ8N1T3 1032 aa15.42■□□□□ 0.06
COL7A1-203ENST00000459756 TMEM102Q8N9M5 508 aaPredicted RBP15.42■□□□□ 0.06
COL7A1-203ENST00000459756 PPFIBP2Q8ND30 876 aa15.42■□□□□ 0.06
COL7A1-203ENST00000459756 PTERQ96BW5 349 aa15.42■□□□□ 0.06
COL7A1-203ENST00000459756 CCDC138Q96M89 665 aa15.42■□□□□ 0.06
COL7A1-203ENST00000459756 ERP44Q9BS26 406 aa15.42■□□□□ 0.06
COL7A1-203ENST00000459756 WDR54Q9H977 334 aa15.42■□□□□ 0.06
COL7A1-203ENST00000459756 SLC22A11Q9NSA0 550 aa15.42■□□□□ 0.06
COL7A1-203ENST00000459756 SLC17A6Q9P2U8 582 aa15.42■□□□□ 0.06
COL7A1-203ENST00000459756 PCDHGA9Q9Y5G4 932 aaKnown RBP15.42■□□□□ 0.06
COL7A1-203ENST00000459756 LOC105369274A0A096LPK9 316 aa15.41■□□□□ 0.06
COL7A1-203ENST00000459756 IGKV1-8A0A0C4DH67 115 aa15.41■□□□□ 0.06
COL7A1-203ENST00000459756 LOC102723532A0A0G2JNH3 316 aa15.41■□□□□ 0.06
COL7A1-203ENST00000459756 NRP2O60462 931 aa15.41■□□□□ 0.06
COL7A1-203ENST00000459756 ALBP02768 609 aa15.41■□□□□ 0.06
COL7A1-203ENST00000459756 ATXN8OSP0DMR3 200 aa15.41■□□□□ 0.06
COL7A1-203ENST00000459756 EZRP15311 586 aaKnown RBP15.41■□□□□ 0.06
COL7A1-203ENST00000459756 IMPA1P29218 277 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms