RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 TUBGCP5Q96RT8 1024 aa19.21■□□□□ 0.67
SNX27-204ENST00000458013 TAS2R7Q9NYW3 318 aa19.21■□□□□ 0.67
SNX27-204ENST00000458013 KCTD3Q9Y597 815 aa19.21■□□□□ 0.67
SNX27-204ENST00000458013 PEX16Q9Y5Y5 336 aa19.21■□□□□ 0.67
SNX27-204ENST00000458013 PPEF2O14830 753 aa19.21■□□□□ 0.67
SNX27-204ENST00000458013 NPHS1O60500 1241 aa19.21■□□□□ 0.67
SNX27-204ENST00000458013 BEND4Q6ZU67 534 aa19.21■□□□□ 0.67
SNX27-204ENST00000458013 SH3RF2Q8TEC5 729 aa19.21■□□□□ 0.67
SNX27-204ENST00000458013 ERMAPQ96PL5 475 aaPredicted RBP19.21■□□□□ 0.67
SNX27-204ENST00000458013 POLR2J3Q9H1A7 115 aaKnown RBP19.21■□□□□ 0.67
SNX27-204ENST00000458013 KAT8Q9H7Z6 458 aaKnown RBP19.21■□□□□ 0.67
SNX27-204ENST00000458013 NOCTQ9UK39 431 aaKnown RBP19.21■□□□□ 0.67
SNX27-204ENST00000458013 GLOD5A6NK44 160 aa19.21■□□□□ 0.67
SNX27-204ENST00000458013 TRAPPC6AO75865 159 aa19.21■□□□□ 0.67
SNX27-204ENST00000458013 ARFRP1Q13795 201 aa19.21■□□□□ 0.67
SNX27-204ENST00000458013 CHRNA6Q15825 494 aa19.21■□□□□ 0.67
SNX27-204ENST00000458013 LYSMD3Q7Z3D4 306 aa19.21■□□□□ 0.67
SNX27-204ENST00000458013 C10orf82Q8WW14 230 aa19.21■□□□□ 0.67
SNX27-204ENST00000458013 ZNF516Q92618 1163 aa19.21■□□□□ 0.67
SNX27-204ENST00000458013 TMBIM1Q969X1 311 aa19.21■□□□□ 0.67
SNX27-204ENST00000458013 HNRNPABQ99729 332 aaKnown RBP19.21■□□□□ 0.67
SNX27-204ENST00000458013 WDR77Q9BQA1 342 aaPredicted RBP19.21■□□□□ 0.67
SNX27-204ENST00000458013 PCDHA2Q9Y5H9 948 aa19.21■□□□□ 0.67
SNX27-204ENST00000458013 PRAMEF12O95522 483 aa19.2■□□□□ 0.66
SNX27-204ENST00000458013 TIGD5Q53EQ6 642 aa19.2■□□□□ 0.66
SNX27-204ENST00000458013 OR8K3Q8NH51 312 aa19.2■□□□□ 0.66
SNX27-204ENST00000458013 DOK4Q8TEW6 326 aa19.2■□□□□ 0.66
SNX27-204ENST00000458013 ERVW-1Q9UQF0 538 aa19.2■□□□□ 0.66
SNX27-204ENST00000458013 PCDHGA10Q9Y5H3 936 aa19.2■□□□□ 0.66
SNX27-204ENST00000458013 M0R036 132 aa19.2■□□□□ 0.66
SNX27-204ENST00000458013 ARPC2O15144 300 aa19.2■□□□□ 0.66
SNX27-204ENST00000458013 CYB5AP00167 134 aa19.2■□□□□ 0.66
SNX27-204ENST00000458013 CXCR1P25024 350 aa19.2■□□□□ 0.66
SNX27-204ENST00000458013 KCNJ5P48544 419 aa19.2■□□□□ 0.66
SNX27-204ENST00000458013 CD47Q08722 323 aa19.2■□□□□ 0.66
SNX27-204ENST00000458013 KCTD9Q7L273 389 aa19.2■□□□□ 0.66
SNX27-204ENST00000458013 SYVN1Q86TM6 617 aa19.2■□□□□ 0.66
SNX27-204ENST00000458013 RASGEF1AQ8N9B8 481 aa19.2■□□□□ 0.66
SNX27-204ENST00000458013 ZNF282Q9UDV7 671 aaPredicted RBP19.2■□□□□ 0.66
SNX27-204ENST00000458013 HYKKA2RU49 373 aa19.2■□□□□ 0.66
SNX27-204ENST00000458013 BPNT1O95861 308 aa19.2■□□□□ 0.66
SNX27-204ENST00000458013 ZNF3P17036 446 aa19.2■□□□□ 0.66
SNX27-204ENST00000458013 PRDX6P30041 224 aa19.2■□□□□ 0.66
SNX27-204ENST00000458013 HERVK_113P63132 956 aa19.2■□□□□ 0.66
SNX27-204ENST00000458013 MEF2AQ02078 507 aaPredicted RBP19.2■□□□□ 0.66
SNX27-204ENST00000458013 CARD16Q5EG05 197 aa19.2■□□□□ 0.66
SNX27-204ENST00000458013 PPP2R2DQ66LE6 453 aa19.2■□□□□ 0.66
SNX27-204ENST00000458013 SYCE2Q6PIF2 218 aa19.2■□□□□ 0.66
SNX27-204ENST00000458013 TMED4Q7Z7H5 227 aa19.2■□□□□ 0.66
SNX27-204ENST00000458013 GTPBP2Q9BX10 602 aaKnown RBP19.2■□□□□ 0.66
SNX27-204ENST00000458013 ERVK-6Q9BXR3 956 aa19.2■□□□□ 0.66
SNX27-204ENST00000458013 TLL2Q9Y6L7 1015 aa19.2■□□□□ 0.66
SNX27-204ENST00000458013 VNN2O95498 520 aa19.2■□□□□ 0.66
SNX27-204ENST00000458013 HK1P19367 917 aa19.2■□□□□ 0.66
SNX27-204ENST00000458013 GPD2P43304 727 aa19.2■□□□□ 0.66
SNX27-204ENST00000458013 PITPNAQ00169 270 aa19.2■□□□□ 0.66
SNX27-204ENST00000458013 PRKCZQ05513 592 aa19.2■□□□□ 0.66
SNX27-204ENST00000458013 NCBP2-AS2Q69YL0 99 aa19.2■□□□□ 0.66
SNX27-204ENST00000458013 AMZ2Q86W34 360 aa19.2■□□□□ 0.66
SNX27-204ENST00000458013 MAGEH1Q9H213 219 aa19.2■□□□□ 0.66
SNX27-204ENST00000458013 FKBP14Q9NWM8 211 aa19.2■□□□□ 0.66
SNX27-204ENST00000458013 UTS2RQ9UKP6 389 aa19.2■□□□□ 0.66
SNX27-204ENST00000458013 L7N2F9 121 aa19.2■□□□□ 0.66
SNX27-204ENST00000458013 TULP2O00295 520 aa19.2■□□□□ 0.66
SNX27-204ENST00000458013 ORC5O43913 435 aa19.2■□□□□ 0.66
SNX27-204ENST00000458013 MAGEA2P43356 314 aa19.2■□□□□ 0.66
SNX27-204ENST00000458013 VAMP2P63027 116 aa19.2■□□□□ 0.66
SNX27-204ENST00000458013 GRSF1Q12849 480 aaKnown RBP eCLIP19.2■□□□□ 0.664e-6■■□□□ 12.6
SNX27-204ENST00000458013 MERTKQ12866 999 aa19.2■□□□□ 0.66
SNX27-204ENST00000458013 SLC10A6Q3KNW5 377 aa19.2■□□□□ 0.66
SNX27-204ENST00000458013 MKKSQ9NPJ1 570 aaPredicted RBP19.2■□□□□ 0.66
SNX27-204ENST00000458013 ATRNL1Q5VV63 1379 aa19.19■□□□□ 0.66
SNX27-204ENST00000458013 CLDN7O95471 211 aa19.19■□□□□ 0.66
SNX27-204ENST00000458013 CAPZA1P52907 286 aa19.19■□□□□ 0.66
SNX27-204ENST00000458013 INHBEP58166 350 aa19.19■□□□□ 0.66
SNX27-204ENST00000458013 ZNF101Q8IZC7 436 aa19.19■□□□□ 0.66
SNX27-204ENST00000458013 FBXL20Q96IG2 436 aa19.19■□□□□ 0.66
SNX27-204ENST00000458013 CNDP2Q96KP4 475 aaKnown RBP19.19■□□□□ 0.66
SNX27-204ENST00000458013 MUC13Q9H3R2 512 aa19.19■□□□□ 0.66
SNX27-204ENST00000458013 TREM1Q9NP99 234 aa19.19■□□□□ 0.66
SNX27-204ENST00000458013 RCOR3Q9P2K3 495 aaPredicted RBP19.19■□□□□ 0.66
SNX27-204ENST00000458013 SRRM3A6NNA2 597 aaPredicted RBP19.19■□□□□ 0.66
SNX27-204ENST00000458013 CLDN25C9JDP6 229 aa19.19■□□□□ 0.66
SNX27-204ENST00000458013 PDCD5O14737 125 aa19.19■□□□□ 0.66
SNX27-204ENST00000458013 P4HA3Q7Z4N8 544 aa19.19■□□□□ 0.66
SNX27-204ENST00000458013 LGI4Q8N135 537 aa19.19■□□□□ 0.66
SNX27-204ENST00000458013 E7EQ34 232 aa19.19■□□□□ 0.66
SNX27-204ENST00000458013 ERI3O43414 337 aaKnown RBP19.19■□□□□ 0.66
SNX27-204ENST00000458013 B4GALT2O60909 372 aa19.19■□□□□ 0.66
SNX27-204ENST00000458013 PTGER3P43115 390 aa19.19■□□□□ 0.66
SNX27-204ENST00000458013 CCR8P51685 355 aa19.19■□□□□ 0.66
SNX27-204ENST00000458013 FUT2Q10981 343 aa19.19■□□□□ 0.66
SNX27-204ENST00000458013 TMEM236Q5W0B7 351 aa19.19■□□□□ 0.66
SNX27-204ENST00000458013 C1orf216Q8TAB5 229 aa19.19■□□□□ 0.66
SNX27-204ENST00000458013 FAM234BA2RU67 622 aa19.19■□□□□ 0.66
SNX27-204ENST00000458013 PTGS2P35354 604 aa19.19■□□□□ 0.66
SNX27-204ENST00000458013 GBX2P52951 348 aaPredicted RBP19.19■□□□□ 0.66
SNX27-204ENST00000458013 AP1S2P56377 157 aa19.19■□□□□ 0.66
SNX27-204ENST00000458013 DSTNP60981 165 aa19.19■□□□□ 0.66
SNX27-204ENST00000458013 C1orf52Q8N6N3 182 aaKnown RBP19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms