RNA–Protein interactions for RNA: ENST00000456608.1

CASC4P1-201, Transcript of cancer susceptibility 4 pseudogene 1, humanhuman

BASIC

Gene CASC4P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4P1-201ENST00000456608 SMU1Q2TAY7 513 aa12.6□□□□□ -0.39
CASC4P1-201ENST00000456608 WDR45BQ5MNZ6 344 aa12.6□□□□□ -0.39
CASC4P1-201ENST00000456608 C6orf136Q5SQH8 315 aa12.6□□□□□ -0.39
CASC4P1-201ENST00000456608 CATSPEREQ5SY80 951 aa12.6□□□□□ -0.39
CASC4P1-201ENST00000456608 FRG2Q64ET8 278 aa12.6□□□□□ -0.39
CASC4P1-201ENST00000456608 IYDQ6PHW0 289 aa12.6□□□□□ -0.39
CASC4P1-201ENST00000456608 NXPE4Q6UWF7 544 aa12.6□□□□□ -0.39
CASC4P1-201ENST00000456608 ASRGL1Q7L266 308 aa12.6□□□□□ -0.39
CASC4P1-201ENST00000456608 TMPRSS11BQ86T26 416 aa12.6□□□□□ -0.39
CASC4P1-201ENST00000456608 C2orf73Q8N5S3 287 aaPredicted RBP12.6□□□□□ -0.39
CASC4P1-201ENST00000456608 LINC01555Q8NAE3 123 aa12.6□□□□□ -0.39
CASC4P1-201ENST00000456608 WDR20Q8TBZ3 569 aa12.6□□□□□ -0.39
CASC4P1-201ENST00000456608 SELENOMQ8WWX9 145 aa12.6□□□□□ -0.39
CASC4P1-201ENST00000456608 PPP3R2Q96LZ3 170 aa12.6□□□□□ -0.39
CASC4P1-201ENST00000456608 FRG2BQ96QU4 278 aa12.6□□□□□ -0.39
CASC4P1-201ENST00000456608 HBEGFQ99075 208 aa12.6□□□□□ -0.39
CASC4P1-201ENST00000456608 LRRC61Q9BV99 259 aa12.6□□□□□ -0.39
CASC4P1-201ENST00000456608 PCBD2Q9H0N5 130 aa12.6□□□□□ -0.39
CASC4P1-201ENST00000456608 MIR1-1HGQ9H1L0 117 aa12.6□□□□□ -0.39
CASC4P1-201ENST00000456608 ELOVL6Q9H5J4 265 aa12.6□□□□□ -0.39
CASC4P1-201ENST00000456608 TAAR2Q9P1P5 351 aa12.6□□□□□ -0.39
CASC4P1-201ENST00000456608 TMEM221A6NGB7 291 aa12.59□□□□□ -0.39
CASC4P1-201ENST00000456608 OR5K4A6NMS3 321 aa12.59□□□□□ -0.39
CASC4P1-201ENST00000456608 M0R296 226 aa12.59□□□□□ -0.39
CASC4P1-201ENST00000456608 LSM1O15116 133 aaKnown RBP12.59□□□□□ -0.39
CASC4P1-201ENST00000456608 LAMTOR5O43504 91 aa12.59□□□□□ -0.39
CASC4P1-201ENST00000456608 PRICKLE3O43900 615 aaPredicted RBP12.59□□□□□ -0.39
CASC4P1-201ENST00000456608 KDM1AO60341 852 aa12.59□□□□□ -0.39
CASC4P1-201ENST00000456608 DNAJC8O75937 253 aaPredicted RBP12.59□□□□□ -0.39
CASC4P1-201ENST00000456608 CSF2P04141 144 aa12.59□□□□□ -0.39
CASC4P1-201ENST00000456608 COX4I1P13073 169 aa12.59□□□□□ -0.39
CASC4P1-201ENST00000456608 CTSEP14091 401 aa12.59□□□□□ -0.39
CASC4P1-201ENST00000456608 CD1EP15812 388 aa12.59□□□□□ -0.39
CASC4P1-201ENST00000456608 JUNDP17535 347 aa12.59□□□□□ -0.39
CASC4P1-201ENST00000456608 PRPH2P23942 346 aa12.59□□□□□ -0.39
CASC4P1-201ENST00000456608 PTPN4P29074 926 aa12.59□□□□□ -0.39
CASC4P1-201ENST00000456608 CORO7P57737 925 aa12.59□□□□□ -0.39
CASC4P1-201ENST00000456608 NXPH1P58417 271 aa12.59□□□□□ -0.39
CASC4P1-201ENST00000456608 ERVK-8P63133 956 aa12.59□□□□□ -0.39
CASC4P1-201ENST00000456608 EMX2Q04743 252 aa12.59□□□□□ -0.39
CASC4P1-201ENST00000456608 NR6A1Q15406 480 aa12.59□□□□□ -0.39
CASC4P1-201ENST00000456608 GSTA3Q16772 222 aa12.59□□□□□ -0.39
CASC4P1-201ENST00000456608 ATP6AP1LQ52LC2 224 aa12.59□□□□□ -0.39
CASC4P1-201ENST00000456608 SGO1Q5FBB7 561 aa12.59□□□□□ -0.39
CASC4P1-201ENST00000456608 TJAP1Q5JTD0 557 aa12.59□□□□□ -0.39
CASC4P1-201ENST00000456608 THEMIS2Q5TEJ8 643 aa12.59□□□□□ -0.39
CASC4P1-201ENST00000456608 LONP2Q86WA8 852 aa12.59□□□□□ -0.39
CASC4P1-201ENST00000456608 MAML2Q8IZL2 1156 aaPredicted RBP12.59□□□□□ -0.39
CASC4P1-201ENST00000456608 CXorf40BQ96DE9 158 aa12.59□□□□□ -0.39
CASC4P1-201ENST00000456608 MTFMTQ96DP5 389 aaKnown RBP12.59□□□□□ -0.39
CASC4P1-201ENST00000456608 EFCAB11Q9BUY7 163 aa12.59□□□□□ -0.39
CASC4P1-201ENST00000456608 TWSG1Q9GZX9 223 aa12.59□□□□□ -0.39
CASC4P1-201ENST00000456608 LRMDAQ9H2I8 198 aa12.59□□□□□ -0.39
CASC4P1-201ENST00000456608 XKR8Q9H6D3 395 aa12.59□□□□□ -0.39
CASC4P1-201ENST00000456608 PELI2Q9HAT8 420 aa12.59□□□□□ -0.39
CASC4P1-201ENST00000456608 AIG1Q9NVV5 245 aa12.59□□□□□ -0.39
CASC4P1-201ENST00000456608 APOBEC3BQ9UH17 382 aaKnown RBP12.59□□□□□ -0.39
CASC4P1-201ENST00000456608 TAC3Q9UHF0 121 aa12.59□□□□□ -0.39
CASC4P1-201ENST00000456608 RRP15Q9Y3B9 282 aaKnown RBP12.59□□□□□ -0.39
CASC4P1-201ENST00000456608 GPR45Q9Y5Y3 372 aa12.59□□□□□ -0.39
CASC4P1-201ENST00000456608 VILLO15195 856 aa12.58□□□□□ -0.4
CASC4P1-201ENST00000456608 SLC34A2O95436 690 aa12.58□□□□□ -0.4
CASC4P1-201ENST00000456608 XRCC1P18887 633 aaPredicted RBP12.58□□□□□ -0.4
CASC4P1-201ENST00000456608 GPX3P22352 226 aa12.58□□□□□ -0.4
CASC4P1-201ENST00000456608 CPA2P48052 419 aa12.58□□□□□ -0.4
CASC4P1-201ENST00000456608 RASSF2P50749 326 aa12.58□□□□□ -0.4
CASC4P1-201ENST00000456608 NEK2P51955 445 aa12.58□□□□□ -0.4
CASC4P1-201ENST00000456608 UBE2IP63279 158 aaKnown RBP12.58□□□□□ -0.4
CASC4P1-201ENST00000456608 C1orf61Q13536 156 aa12.58□□□□□ -0.4
CASC4P1-201ENST00000456608 LAPTM5Q13571 262 aa12.58□□□□□ -0.4
CASC4P1-201ENST00000456608 SLBPQ14493 270 aaKnown RBP eCLIP12.58□□□□□ -0.4
CASC4P1-201ENST00000456608 AP5B1Q2VPB7 878 aa12.58□□□□□ -0.4
CASC4P1-201ENST00000456608 MED27Q6P2C8 311 aa12.58□□□□□ -0.4
CASC4P1-201ENST00000456608 RINLQ6ZS11 566 aa12.58□□□□□ -0.4
CASC4P1-201ENST00000456608 ARMCX6Q7L4S7 300 aa12.58□□□□□ -0.4
CASC4P1-201ENST00000456608 TAF8Q7Z7C8 310 aa12.58□□□□□ -0.4
CASC4P1-201ENST00000456608 C17orf64Q86WR6 236 aa12.58□□□□□ -0.4
CASC4P1-201ENST00000456608 FAM129CQ86XR2 697 aa12.58□□□□□ -0.4
CASC4P1-201ENST00000456608 LAS2Q8IYD9 372 aa12.58□□□□□ -0.4
CASC4P1-201ENST00000456608 POU5F2Q8N7G0 328 aa12.58□□□□□ -0.4
CASC4P1-201ENST00000456608 RP9Q8TA86 221 aaKnown RBP12.58□□□□□ -0.4
CASC4P1-201ENST00000456608 ZFPM2Q8WW38 1151 aa12.58□□□□□ -0.4
CASC4P1-201ENST00000456608 CMTM5Q96DZ9 223 aa12.58□□□□□ -0.4
CASC4P1-201ENST00000456608 ACPTQ9BZG2 426 aa12.58□□□□□ -0.4
CASC4P1-201ENST00000456608 POT1Q9NUX5 634 aa12.58□□□□□ -0.4
CASC4P1-201ENST00000456608 GEMIN8Q9NWZ8 242 aaKnown RBP12.58□□□□□ -0.4
CASC4P1-201ENST00000456608 TSC22D4Q9Y3Q8 395 aa12.58□□□□□ -0.4
CASC4P1-201ENST00000456608 PCDHGA11Q9Y5H2 935 aa12.58□□□□□ -0.4
CASC4P1-201ENST00000456608 TRBV23OR9-2A0A075B6M9 112 aa12.57□□□□□ -0.4
CASC4P1-201ENST00000456608 KIR2DS5A0A0G2JLQ3 304 aa12.57□□□□□ -0.4
CASC4P1-201ENST00000456608 A0A0G2JNG1 304 aa12.57□□□□□ -0.4
CASC4P1-201ENST00000456608 PIPSLA2A3N6 862 aa12.57□□□□□ -0.4
CASC4P1-201ENST00000456608 KIR2DS3K7RE56 304 aa12.57□□□□□ -0.4
CASC4P1-201ENST00000456608 PSMD12O00232 456 aaPredicted RBP12.57□□□□□ -0.4
CASC4P1-201ENST00000456608 BCAT2O15382 392 aaPredicted RBP12.57□□□□□ -0.4
CASC4P1-201ENST00000456608 RSL1D1O76021 490 aaKnown RBP12.57□□□□□ -0.4
CASC4P1-201ENST00000456608 THRAP10827 490 aa12.57□□□□□ -0.4
CASC4P1-201ENST00000456608 CDH1P12830 882 aa12.57□□□□□ -0.4
CASC4P1-201ENST00000456608 HSD3B1P14060 373 aa12.57□□□□□ -0.4
CASC4P1-201ENST00000456608 SLC2A4P14672 509 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms