RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 ZNF551Q7Z340 670 aaPredicted RBP17.84■□□□□ 0.45
SEMA3B-209ENST00000456560 ZNF557Q8N988 423 aaPredicted RBP17.84■□□□□ 0.45
SEMA3B-209ENST00000456560 POP5Q969H6 163 aaKnown RBP17.84■□□□□ 0.45
SEMA3B-209ENST00000456560 REXO5Q96IC2 774 aaKnown RBP17.84■□□□□ 0.45
SEMA3B-209ENST00000456560 MBOAT4Q96T53 435 aa17.84■□□□□ 0.45
SEMA3B-209ENST00000456560 RIOK2Q9BVS4 552 aaKnown RBP17.84■□□□□ 0.45
SEMA3B-209ENST00000456560 TOR3AQ9H497 397 aa17.84■□□□□ 0.45
SEMA3B-209ENST00000456560 SMURF2Q9HAU4 748 aa17.84■□□□□ 0.45
SEMA3B-209ENST00000456560 CDH7Q9ULB5 785 aa17.84■□□□□ 0.45
SEMA3B-209ENST00000456560 FADS2P1A8MWK0 482 aa17.83■□□□□ 0.45
SEMA3B-209ENST00000456560 TTC34A8MYJ7 566 aa17.83■□□□□ 0.45
SEMA3B-209ENST00000456560 UPK3BL1B0FP48 263 aa17.83■□□□□ 0.45
SEMA3B-209ENST00000456560 UPK3BL2E5RIL1 263 aa17.83■□□□□ 0.45
SEMA3B-209ENST00000456560 PER2O15055 1255 aa17.83■□□□□ 0.45
SEMA3B-209ENST00000456560 LEFTY1O75610 366 aa17.83■□□□□ 0.45
SEMA3B-209ENST00000456560 FTH1P02794 183 aa17.83■□□□□ 0.45
SEMA3B-209ENST00000456560 GSTM1P09488 218 aa17.83■□□□□ 0.45
SEMA3B-209ENST00000456560 CD22P20273 847 aa17.83■□□□□ 0.45
SEMA3B-209ENST00000456560 HALP42357 657 aa17.83■□□□□ 0.45
SEMA3B-209ENST00000456560 YAP1P46937 504 aaKnown RBP17.83■□□□□ 0.45
SEMA3B-209ENST00000456560 ERVFC1P60507 584 aa17.83■□□□□ 0.45
SEMA3B-209ENST00000456560 GSTM4Q03013 218 aa17.83■□□□□ 0.45
SEMA3B-209ENST00000456560 ZNF33BQ06732 778 aa17.83■□□□□ 0.45
SEMA3B-209ENST00000456560 LAPTM5Q13571 262 aa17.83■□□□□ 0.45
SEMA3B-209ENST00000456560 ARSIQ5FYB1 569 aa17.83■□□□□ 0.45
SEMA3B-209ENST00000456560 LY6G5CQ5SRR4 150 aa17.83■□□□□ 0.45
SEMA3B-209ENST00000456560 ZNF648Q5T619 568 aaPredicted RBP17.83■□□□□ 0.45
SEMA3B-209ENST00000456560 LIPJQ5W064 366 aa17.83■□□□□ 0.45
SEMA3B-209ENST00000456560 SLC22A15Q8IZD6 547 aa17.83■□□□□ 0.45
SEMA3B-209ENST00000456560 PNPT1Q8TCS8 783 aaKnown RBP17.83■□□□□ 0.45
SEMA3B-209ENST00000456560 GIPC3Q8TF64 312 aa17.83■□□□□ 0.45
SEMA3B-209ENST00000456560 NCLNQ969V3 563 aa17.83■□□□□ 0.45
SEMA3B-209ENST00000456560 TIFAQ96CG3 184 aa17.83■□□□□ 0.45
SEMA3B-209ENST00000456560 TMX2-CTNND1H3BSU7 103 aa17.83■□□□□ 0.44
SEMA3B-209ENST00000456560 UGDHO60701 494 aa17.83■□□□□ 0.44
SEMA3B-209ENST00000456560 PSIP1O75475 530 aaKnown RBP17.83■□□□□ 0.44
SEMA3B-209ENST00000456560 LRATO95237 230 aa17.83■□□□□ 0.44
SEMA3B-209ENST00000456560 FGF19O95750 216 aa17.83■□□□□ 0.44
SEMA3B-209ENST00000456560 SERPINA1P01009 418 aa17.83■□□□□ 0.44
SEMA3B-209ENST00000456560 HOXB6P17509 224 aaKnown RBP17.83■□□□□ 0.44
SEMA3B-209ENST00000456560 ELK4P28324 431 aa17.83■□□□□ 0.44
SEMA3B-209ENST00000456560 TTKP33981 857 aa17.83■□□□□ 0.44
SEMA3B-209ENST00000456560 ZNF77Q15935 545 aa17.83■□□□□ 0.44
SEMA3B-209ENST00000456560 ANKDD1AQ495B1 522 aa17.83■□□□□ 0.44
SEMA3B-209ENST00000456560 GPR107Q5VW38 600 aa17.83■□□□□ 0.44
SEMA3B-209ENST00000456560 OR4F3Q6IEY1 312 aa17.83■□□□□ 0.44
SEMA3B-209ENST00000456560 KCTD8Q6ZWB6 473 aa17.83■□□□□ 0.44
SEMA3B-209ENST00000456560 RNF175Q8N4F7 328 aa17.83■□□□□ 0.44
SEMA3B-209ENST00000456560 WDR20Q8TBZ3 569 aa17.83■□□□□ 0.44
SEMA3B-209ENST00000456560 SDCCAG3Q96C92 435 aa17.83■□□□□ 0.44
SEMA3B-209ENST00000456560 POLR1BQ9H9Y6 1135 aa17.83■□□□□ 0.44
SEMA3B-209ENST00000456560 TBC1D23Q9NUY8 699 aa17.83■□□□□ 0.44
SEMA3B-209ENST00000456560 FAM118AQ9NWS6 357 aa17.83■□□□□ 0.44
SEMA3B-209ENST00000456560 IRAK3Q9Y616 596 aa17.83■□□□□ 0.44
SEMA3B-209ENST00000456560 TMEM202A6NGA9 273 aa17.82■□□□□ 0.44
SEMA3B-209ENST00000456560 HIDE1A8MVS5 230 aa17.82■□□□□ 0.44
SEMA3B-209ENST00000456560 ARHGEF33A8MVX0 844 aa17.82■□□□□ 0.44
SEMA3B-209ENST00000456560 H3BMQ9 156 aa17.82■□□□□ 0.44
SEMA3B-209ENST00000456560 ATP6V1G1O75348 118 aa17.82■□□□□ 0.44
SEMA3B-209ENST00000456560 CTSLP07711 333 aa17.82■□□□□ 0.44
SEMA3B-209ENST00000456560 MYCLP1P12525 358 aaPredicted RBP17.82■□□□□ 0.44
SEMA3B-209ENST00000456560 POLR2EP19388 210 aaKnown RBP17.82■□□□□ 0.44
SEMA3B-209ENST00000456560 TRPC1P48995 793 aa17.82■□□□□ 0.44
SEMA3B-209ENST00000456560 HTRA4P83105 476 aaPredicted RBP17.82■□□□□ 0.44
SEMA3B-209ENST00000456560 SFSWAPQ12872 951 aaKnown RBP17.82■□□□□ 0.44
SEMA3B-209ENST00000456560 CSTF3Q12996 717 aaKnown RBP17.82■□□□□ 0.44
SEMA3B-209ENST00000456560 RAB39AQ14964 217 aa17.82■□□□□ 0.44
SEMA3B-209ENST00000456560 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.82■□□□□ 0.44
SEMA3B-209ENST00000456560 TTC23Q5W5X9 447 aa17.82■□□□□ 0.44
SEMA3B-209ENST00000456560 TECPR1Q7Z6L1 1165 aa17.82■□□□□ 0.44
SEMA3B-209ENST00000456560 TMEM179BQ7Z7N9 219 aa17.82■□□□□ 0.44
SEMA3B-209ENST00000456560 ADHFE1Q8IWW8 467 aa17.82■□□□□ 0.44
SEMA3B-209ENST00000456560 KLHDC8AQ8IYD2 350 aa17.82■□□□□ 0.44
SEMA3B-209ENST00000456560 HS3ST5Q8IZT8 346 aa17.82■□□□□ 0.44
SEMA3B-209ENST00000456560 ZCCHC7Q8N3Z6 543 aaKnown RBP17.82■□□□□ 0.44
SEMA3B-209ENST00000456560 OR5K1Q8NHB7 308 aa17.82■□□□□ 0.44
SEMA3B-209ENST00000456560 CSGALNACT1Q8TDX6 532 aa17.82■□□□□ 0.44
SEMA3B-209ENST00000456560 CYB5D2Q8WUJ1 264 aa17.82■□□□□ 0.44
SEMA3B-209ENST00000456560 SORCS1Q8WY21 1168 aa17.82■□□□□ 0.44
SEMA3B-209ENST00000456560 COG8Q96MW5 612 aa17.82■□□□□ 0.44
SEMA3B-209ENST00000456560 RAD18Q9NS91 495 aa17.82■□□□□ 0.44
SEMA3B-209ENST00000456560 THG1LQ9NWX6 298 aaKnown RBP17.82■□□□□ 0.44
SEMA3B-209ENST00000456560 SH3GLB1Q9Y371 365 aa17.82■□□□□ 0.44
SEMA3B-209ENST00000456560 MTCL1Q9Y4B5 1905 aaKnown RBP17.82■□□□□ 0.44
SEMA3B-209ENST00000456560 OR2AG2A6NM03 316 aa17.82■□□□□ 0.44
SEMA3B-209ENST00000456560 SCN2BO60939 215 aa17.82■□□□□ 0.44
SEMA3B-209ENST00000456560 RFPL2O75678 378 aa17.82■□□□□ 0.44
SEMA3B-209ENST00000456560 PTPN2P17706 415 aa17.82■□□□□ 0.44
SEMA3B-209ENST00000456560 PRPS1L1P21108 318 aa17.82■□□□□ 0.44
SEMA3B-209ENST00000456560 POLR2IP36954 125 aaKnown RBP17.82■□□□□ 0.44
SEMA3B-209ENST00000456560 DCTP40126 519 aa17.82■□□□□ 0.44
SEMA3B-209ENST00000456560 IRF8Q02556 426 aa17.82■□□□□ 0.44
SEMA3B-209ENST00000456560 EPS8Q12929 822 aa17.82■□□□□ 0.44
SEMA3B-209ENST00000456560 ANKRD34AQ69YU3 496 aa17.82■□□□□ 0.44
SEMA3B-209ENST00000456560 ZNF773Q6PK81 442 aa17.82■□□□□ 0.44
SEMA3B-209ENST00000456560 DPPA4Q7L190 304 aa17.82■□□□□ 0.44
SEMA3B-209ENST00000456560 OTOP2Q7RTS6 562 aa17.82■□□□□ 0.44
SEMA3B-209ENST00000456560 THAP5Q7Z6K1 395 aa17.82■□□□□ 0.44
SEMA3B-209ENST00000456560 THOC6Q86W42 341 aaKnown RBP17.82■□□□□ 0.44
SEMA3B-209ENST00000456560 CHPFQ8IZ52 775 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms