RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 KLHL20Q9Y2M5 609 aa10.03□□□□□ -0.8
CLIP4-208ENST00000456385 WDR90Q96KV7 1748 aa10.03□□□□□ -0.8
CLIP4-208ENST00000456385 NUP214P35658 2090 aaPredicted RBP10.02□□□□□ -0.8
CLIP4-208ENST00000456385 HMX3A6NHT5 357 aa10.02□□□□□ -0.8
CLIP4-208ENST00000456385 CASTOR2A6NHX0 329 aa10.02□□□□□ -0.8
CLIP4-208ENST00000456385 ADM5C9JUS6 153 aa10.02□□□□□ -0.8
CLIP4-208ENST00000456385 MEN1O00255 615 aa10.02□□□□□ -0.8
CLIP4-208ENST00000456385 PDHXO00330 501 aa10.02□□□□□ -0.8
CLIP4-208ENST00000456385 GPR182O15218 404 aa10.02□□□□□ -0.8
CLIP4-208ENST00000456385 SLITRK5O94991 958 aa10.02□□□□□ -0.8
CLIP4-208ENST00000456385 CCNDBP1O95273 360 aa10.02□□□□□ -0.8
CLIP4-208ENST00000456385 HLA-DPA1P20036 260 aa10.02□□□□□ -0.8
CLIP4-208ENST00000456385 PTPN6P29350 595 aa10.02□□□□□ -0.8
CLIP4-208ENST00000456385 RRM2P31350 389 aa10.02□□□□□ -0.8
CLIP4-208ENST00000456385 HTR7P34969 479 aa10.02□□□□□ -0.8
CLIP4-208ENST00000456385 IDH2P48735 452 aaKnown RBP10.02□□□□□ -0.8
CLIP4-208ENST00000456385 DAB2P98082 770 aa10.02□□□□□ -0.8
CLIP4-208ENST00000456385 TWF2Q6IBS0 349 aaKnown RBP10.02□□□□□ -0.8
CLIP4-208ENST00000456385 ERAP2Q6P179 960 aa10.02□□□□□ -0.8
CLIP4-208ENST00000456385 RGL4Q8IZJ4 473 aa10.02□□□□□ -0.8
CLIP4-208ENST00000456385 MDGA1Q8NFP4 955 aa10.02□□□□□ -0.8
CLIP4-208ENST00000456385 TRPM4Q8TD43 1214 aa10.02□□□□□ -0.8
CLIP4-208ENST00000456385 GPR151Q8TDV0 419 aa10.02□□□□□ -0.8
CLIP4-208ENST00000456385 RASSF5Q8WWW0 418 aa10.02□□□□□ -0.8
CLIP4-208ENST00000456385 MYDGFQ969H8 173 aa10.02□□□□□ -0.8
CLIP4-208ENST00000456385 TBC1D20Q96BZ9 403 aa10.02□□□□□ -0.8
CLIP4-208ENST00000456385 TMCO6Q96DC7 493 aa10.02□□□□□ -0.8
CLIP4-208ENST00000456385 B3GALT6Q96L58 329 aa10.02□□□□□ -0.8
CLIP4-208ENST00000456385 DPH2Q9BQC3 489 aaPredicted RBP10.02□□□□□ -0.8
CLIP4-208ENST00000456385 ZNF408Q9H9D4 720 aa10.02□□□□□ -0.8
CLIP4-208ENST00000456385 BPIFA1Q9NP55 256 aa10.02□□□□□ -0.8
CLIP4-208ENST00000456385 TIGARQ9NQ88 270 aa10.02□□□□□ -0.8
CLIP4-208ENST00000456385 AASDHPPTQ9NRN7 309 aa10.02□□□□□ -0.8
CLIP4-208ENST00000456385 ACOXLQ9NUZ1 547 aa10.02□□□□□ -0.8
CLIP4-208ENST00000456385 NLE1Q9NVX2 485 aaPredicted RBP10.02□□□□□ -0.8
CLIP4-208ENST00000456385 GPRC5BQ9NZH0 403 aa10.02□□□□□ -0.8
CLIP4-208ENST00000456385 SLC6A14Q9UN76 642 aa10.02□□□□□ -0.8
CLIP4-208ENST00000456385 PRELID1Q9Y255 219 aa10.02□□□□□ -0.8
CLIP4-208ENST00000456385 GRIP1Q9Y3R0 1128 aa10.02□□□□□ -0.8
CLIP4-208ENST00000456385 PCDHB5Q9Y5E4 795 aa10.02□□□□□ -0.8
CLIP4-208ENST00000456385 A0A1W2PQH9 124 aa10.02□□□□□ -0.81
CLIP4-208ENST00000456385 E5RI56 91 aa10.02□□□□□ -0.81
CLIP4-208ENST00000456385 RGS14O43566 566 aa10.02□□□□□ -0.81
CLIP4-208ENST00000456385 LRATO95237 230 aa10.02□□□□□ -0.81
CLIP4-208ENST00000456385 OTCP00480 354 aa10.02□□□□□ -0.81
CLIP4-208ENST00000456385 ITGB1P05556 798 aa10.02□□□□□ -0.81
CLIP4-208ENST00000456385 YES1P07947 543 aa10.02□□□□□ -0.81
CLIP4-208ENST00000456385 SLC10A3P09131 477 aa10.02□□□□□ -0.81
CLIP4-208ENST00000456385 BCKDHAP12694 445 aa10.02□□□□□ -0.81
CLIP4-208ENST00000456385 ITGA2P17301 1181 aa10.02□□□□□ -0.81
CLIP4-208ENST00000456385 HNF4AP41235 474 aa10.02□□□□□ -0.81
CLIP4-208ENST00000456385 GNPDA1P46926 289 aa10.02□□□□□ -0.81
CLIP4-208ENST00000456385 ZNF140P52738 457 aaPredicted RBP10.02□□□□□ -0.81
CLIP4-208ENST00000456385 ST3GAL4Q11206 333 aa10.02□□□□□ -0.81
CLIP4-208ENST00000456385 ZNF79Q15937 498 aa10.02□□□□□ -0.81
CLIP4-208ENST00000456385 DUSP7Q16829 419 aa10.02□□□□□ -0.81
CLIP4-208ENST00000456385 PTCHD3Q3KNS1 767 aa10.02□□□□□ -0.81
CLIP4-208ENST00000456385 TIGD5Q53EQ6 642 aa10.02□□□□□ -0.81
CLIP4-208ENST00000456385 GPAT3Q53EU6 434 aa10.02□□□□□ -0.81
CLIP4-208ENST00000456385 GNASQ5JWF2 1037 aa10.02□□□□□ -0.81
CLIP4-208ENST00000456385 ZNF648Q5T619 568 aaPredicted RBP10.02□□□□□ -0.81
CLIP4-208ENST00000456385 CACHD1Q5VU97 1274 aa10.02□□□□□ -0.81
CLIP4-208ENST00000456385 FAHD1Q6P587 224 aa10.02□□□□□ -0.81
CLIP4-208ENST00000456385 BPHLQ86WA6 291 aaPredicted RBP10.02□□□□□ -0.81
CLIP4-208ENST00000456385 TRIM48Q8IWZ4 208 aa10.02□□□□□ -0.81
CLIP4-208ENST00000456385 NATD1Q8N6N6 113 aa10.02□□□□□ -0.81
CLIP4-208ENST00000456385 GLB1L3Q8NCI6 653 aaPredicted RBP10.02□□□□□ -0.81
CLIP4-208ENST00000456385 OR5H6Q8NGV6 325 aa10.02□□□□□ -0.81
CLIP4-208ENST00000456385 GRPEL2Q8TAA5 225 aa10.02□□□□□ -0.81
CLIP4-208ENST00000456385 HASPINQ8TF76 798 aa10.02□□□□□ -0.81
CLIP4-208ENST00000456385 SLC7A6Q92536 515 aa10.02□□□□□ -0.81
CLIP4-208ENST00000456385 PEX13Q92968 403 aa10.02□□□□□ -0.81
CLIP4-208ENST00000456385 IGSF8Q969P0 613 aa10.02□□□□□ -0.81
CLIP4-208ENST00000456385 HSH2DQ96JZ2 352 aa10.02□□□□□ -0.81
CLIP4-208ENST00000456385 SPATA17Q96L03 361 aa10.02□□□□□ -0.81
CLIP4-208ENST00000456385 TSEN34Q9BSV6 310 aaKnown RBP10.02□□□□□ -0.81
CLIP4-208ENST00000456385 POLR1EQ9GZS1 481 aaKnown RBP10.02□□□□□ -0.81
CLIP4-208ENST00000456385 REEP1Q9H902 201 aa10.02□□□□□ -0.81
CLIP4-208ENST00000456385 ELOVL2Q9NXB9 296 aa10.02□□□□□ -0.81
CLIP4-208ENST00000456385 DLGAP4Q9Y2H0 992 aa10.02□□□□□ -0.81
CLIP4-208ENST00000456385 A0A0B4J293 547 aa10.01□□□□□ -0.81
CLIP4-208ENST00000456385 A0A1W2PQ09 198 aa10.01□□□□□ -0.81
CLIP4-208ENST00000456385 WASH4PA8MWX3 477 aa10.01□□□□□ -0.81
CLIP4-208ENST00000456385 FAM25AB3EWG3 89 aa10.01□□□□□ -0.81
CLIP4-208ENST00000456385 FAM25CB3EWG5 89 aa10.01□□□□□ -0.81
CLIP4-208ENST00000456385 FAM25GB3EWG6 89 aa10.01□□□□□ -0.81
CLIP4-208ENST00000456385 H3BM21 787 aa10.01□□□□□ -0.81
CLIP4-208ENST00000456385 ERN1O75460 977 aaKnown RBP10.01□□□□□ -0.81
CLIP4-208ENST00000456385 UGT2B17O75795 530 aa10.01□□□□□ -0.81
CLIP4-208ENST00000456385 CSF2P04141 144 aa10.01□□□□□ -0.81
CLIP4-208ENST00000456385 COL6A1P12109 1028 aa10.01□□□□□ -0.81
CLIP4-208ENST00000456385 TACR1P25103 407 aa10.01□□□□□ -0.81
CLIP4-208ENST00000456385 RPS12P25398 132 aaKnown RBP10.01□□□□□ -0.81
CLIP4-208ENST00000456385 ARPP19P56211 112 aa10.01□□□□□ -0.81
CLIP4-208ENST00000456385 ABHD18Q0P651 414 aa10.01□□□□□ -0.81
CLIP4-208ENST00000456385 MADCAM1Q13477 382 aa10.01□□□□□ -0.81
CLIP4-208ENST00000456385 MED22Q15528 200 aa10.01□□□□□ -0.81
CLIP4-208ENST00000456385 TSTQ16762 297 aaKnown RBP10.01□□□□□ -0.81
CLIP4-208ENST00000456385 TRIM60Q495X7 471 aa10.01□□□□□ -0.81
CLIP4-208ENST00000456385 USP39Q53GS9 565 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms