RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 HCRTR2O43614 444 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 MITFO75030 526 aaPredicted RBP5.1□□□□□ -1.59
CSMD3-204ENST00000455883 SOCS5O75159 536 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 RASAL1O95294 804 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 SGPL1O95470 568 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 SLC35G4P0C7Q5 338 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 IL1R1P14778 569 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 CACNB3P54284 484 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 MANFP55145 182 aaKnown RBP5.1□□□□□ -1.59
CSMD3-204ENST00000455883 VAMP2P63027 116 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 TAF5Q15542 800 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 EFCAB12Q6NXP0 572 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 NOP9Q86U38 636 aaKnown RBP5.1□□□□□ -1.59
CSMD3-204ENST00000455883 SLC47A2Q86VL8 602 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 DCP2Q8IU60 420 aaKnown RBP5.1□□□□□ -1.59
CSMD3-204ENST00000455883 DENND1CQ8IV53 801 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 COPS5Q92905 334 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 CIB1Q99828 191 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 ZNF471Q9BX82 626 aaPredicted RBP5.1□□□□□ -1.59
CSMD3-204ENST00000455883 CKBP12277 381 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 MATN1P21941 496 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 DDX6P26196 483 aaKnown RBP eCLIP5.1□□□□□ -1.59
CSMD3-204ENST00000455883 HLA-FP30511 346 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 OXTRP30559 389 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 ACOT2P49753 483 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 SNTA1Q13424 505 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 GRIK4Q16099 956 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 NTRK3Q16288 839 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 UBE2SQ16763 222 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 GAREM2Q75VX8 874 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 ZNF34Q8IZ26 560 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 TMEM209Q96SK2 561 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 PRRT1Q99946 306 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 UQCC2Q9BRT2 126 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 P2RX2Q9UBL9 471 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 NPC1O15118 1278 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 TPD52L2O43399 206 aaKnown RBP5.1□□□□□ -1.59
CSMD3-204ENST00000455883 RPP40O75818 363 aaKnown RBP5.1□□□□□ -1.59
CSMD3-204ENST00000455883 DGKIO75912 1065 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 TRUB2O95900 331 aaKnown RBP5.1□□□□□ -1.59
CSMD3-204ENST00000455883 TPH1P17752 444 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 MPIP34949 423 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 CLCN4P51793 760 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 AFF1P51825 1210 aaKnown RBP5.1□□□□□ -1.59
CSMD3-204ENST00000455883 RAP2BP61225 183 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 ADIGQ0VDE8 80 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 BTG3Q14201 252 aaPredicted RBP5.1□□□□□ -1.59
CSMD3-204ENST00000455883 CDK10Q15131 360 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 NKX1-1Q15270 411 aaPredicted RBP5.1□□□□□ -1.59
CSMD3-204ENST00000455883 ATP6AP1Q15904 470 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 BRAT1Q6PJG6 821 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 LIX1LQ8IVB5 337 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 TAB3Q8N5C8 712 aaPredicted RBP5.1□□□□□ -1.59
CSMD3-204ENST00000455883 OR2L5Q8NG80 312 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 OR8K5Q8NH50 307 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 COQ8AQ8NI60 647 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 SMARCD2Q92925 531 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 LRFN5Q96NI6 719 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 GAL3ST1Q99999 423 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 MTG2Q9H4K7 406 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 ZNF408Q9H9D4 720 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 SRA1Q9HD15 236 aaKnown RBP5.1□□□□□ -1.59
CSMD3-204ENST00000455883 ZNF536O15090 1300 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 WDR27A2RRH5 827 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 CDC25AP30304 524 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 SLC25A3Q00325 362 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 MAPK14Q16539 360 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 TPRG1LQ5T0D9 272 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 PRAMEF17Q5VTA0 474 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 ZDHHC14Q8IZN3 488 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 ZNF615Q8N8J6 731 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 ACOX2Q99424 681 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 SYT15Q9BQS2 421 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 OR10H1Q9Y4A9 318 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 NOBOXO60393 691 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 NAT2P11245 290 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 GYS1P13807 737 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 KCTD18Q6PI47 426 aaPredicted RBP5.1□□□□□ -1.59
CSMD3-204ENST00000455883 LNX2Q8N448 690 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 OR10A6Q8NH74 314 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 MBOAT7Q96N66 472 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 DPYSL5Q9BPU6 564 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 PTPRHQ9HD43 1115 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 BIN3Q9NQY0 253 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 MRC1P22897 1456 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 I3L521 148 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 CYB561D2O14569 222 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 PRKAB2O43741 272 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 CCNIQ14094 377 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 PCSK7Q16549 785 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 LCLAT1Q6UWP7 414 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 PDSS2Q86YH6 399 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 CCDC71LQ8N9Z2 235 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 NT5MQ9NPB1 228 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 HCN4Q9Y3Q4 1203 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 ARFGEF1Q9Y6D6 1849 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 SOX15O60248 233 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 IFNA5P01569 189 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 PIGRP01833 764 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 PTPN2P17706 415 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms