RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 ANXA5P08758 320 aa26.9■■□□□ 1.9
SMARCC1-203ENST00000454240 SNRPAP09012 282 aaKnown RBP26.9■■□□□ 1.9
SMARCC1-203ENST00000454240 CCND1P24385 295 aa26.9■■□□□ 1.9
SMARCC1-203ENST00000454240 IRF9Q00978 393 aa26.9■■□□□ 1.9
SMARCC1-203ENST00000454240 TGFBIQ15582 683 aa26.9■■□□□ 1.9
SMARCC1-203ENST00000454240 TAF1BQ53T94 588 aaPredicted RBP26.9■■□□□ 1.9
SMARCC1-203ENST00000454240 ISCA2Q86U28 154 aa26.9■■□□□ 1.9
SMARCC1-203ENST00000454240 DTX1Q86Y01 620 aa26.9■■□□□ 1.9
SMARCC1-203ENST00000454240 NXNL1Q96CM4 212 aa26.9■■□□□ 1.9
SMARCC1-203ENST00000454240 PCBD2Q9H0N5 130 aa26.9■■□□□ 1.9
SMARCC1-203ENST00000454240 FANCEQ9HB96 536 aa26.9■■□□□ 1.9
SMARCC1-203ENST00000454240 SLC6A20Q9NP91 592 aa26.9■■□□□ 1.9
SMARCC1-203ENST00000454240 MRPS30Q9NP92 439 aaKnown RBP26.9■■□□□ 1.9
SMARCC1-203ENST00000454240 TMEM184BQ9Y519 407 aaPredicted RBP26.9■■□□□ 1.9
SMARCC1-203ENST00000454240 ZFHX4Q86UP3 3567 aa26.9■■□□□ 1.9
SMARCC1-203ENST00000454240 IGKV1-8A0A0C4DH67 115 aa26.89■■□□□ 1.9
SMARCC1-203ENST00000454240 STMND1H3BQB6 276 aa26.89■■□□□ 1.9
SMARCC1-203ENST00000454240 TIAF1O95411 115 aa26.89■■□□□ 1.9
SMARCC1-203ENST00000454240 SHBGP04278 402 aa26.89■■□□□ 1.9
SMARCC1-203ENST00000454240 HSD17B3P37058 310 aa26.89■■□□□ 1.9
SMARCC1-203ENST00000454240 ABATP80404 500 aa26.89■■□□□ 1.9
SMARCC1-203ENST00000454240 NAA25Q14CX7 972 aa26.89■■□□□ 1.9
SMARCC1-203ENST00000454240 THEMIS2Q5TEJ8 643 aa26.89■■□□□ 1.9
SMARCC1-203ENST00000454240 PRAMEF13Q5VWM6 474 aa26.89■■□□□ 1.9
SMARCC1-203ENST00000454240 PWWP2BQ6NUJ5 590 aa26.89■■□□□ 1.9
SMARCC1-203ENST00000454240 FRA10AC1Q70Z53 315 aa26.89■■□□□ 1.9
SMARCC1-203ENST00000454240 OR1L3Q8NH93 324 aa26.89■■□□□ 1.9
SMARCC1-203ENST00000454240 KCTD4Q8WVF5 259 aa26.89■■□□□ 1.9
SMARCC1-203ENST00000454240 CAVIN3Q969G5 261 aa26.89■■□□□ 1.9
SMARCC1-203ENST00000454240 MED8Q96G25 268 aa26.89■■□□□ 1.9
SMARCC1-203ENST00000454240 DPH7Q9BTV6 452 aa26.89■■□□□ 1.9
SMARCC1-203ENST00000454240 ABCF3Q9NUQ8 709 aa26.89■■□□□ 1.9
SMARCC1-203ENST00000454240 ANKMY1Q9P2S6 941 aa26.89■■□□□ 1.9
SMARCC1-203ENST00000454240 PILRAQ9UKJ1 303 aa26.89■■□□□ 1.9
SMARCC1-203ENST00000454240 OR2A25A4D2G3 310 aa26.88■■□□□ 1.89
SMARCC1-203ENST00000454240 TMEM150CB9EJG8 249 aa26.88■■□□□ 1.89
SMARCC1-203ENST00000454240 STK17BO94768 372 aa26.88■■□□□ 1.89
SMARCC1-203ENST00000454240 KLHL2O95198 593 aa26.88■■□□□ 1.89
SMARCC1-203ENST00000454240 ZNF28P17035 718 aa26.88■■□□□ 1.89
SMARCC1-203ENST00000454240 TFEBP19484 476 aa26.88■■□□□ 1.89
SMARCC1-203ENST00000454240 KCNC1P48547 511 aa26.88■■□□□ 1.89
SMARCC1-203ENST00000454240 HNMTP50135 292 aa26.88■■□□□ 1.89
SMARCC1-203ENST00000454240 NAA30Q147X3 362 aaPredicted RBP26.88■■□□□ 1.89
SMARCC1-203ENST00000454240 FAM83EQ2M2I3 478 aa26.88■■□□□ 1.89
SMARCC1-203ENST00000454240 CDKL4Q5MAI5 379 aa26.88■■□□□ 1.89
SMARCC1-203ENST00000454240 CAPN13Q6MZZ7 669 aaPredicted RBP26.88■■□□□ 1.89
SMARCC1-203ENST00000454240 LCTLQ6UWM7 567 aa26.88■■□□□ 1.89
SMARCC1-203ENST00000454240 TIFABQ6ZNK6 161 aa26.88■■□□□ 1.89
SMARCC1-203ENST00000454240 GPSM1Q86YR5 675 aa26.88■■□□□ 1.89
SMARCC1-203ENST00000454240 STAG3L4Q8TBR4 150 aa26.88■■□□□ 1.89
SMARCC1-203ENST00000454240 MTBPQ96DY7 904 aa26.88■■□□□ 1.89
SMARCC1-203ENST00000454240 SERTAD3Q9UJW9 196 aa26.88■■□□□ 1.89
SMARCC1-203ENST00000454240 PLCL2Q9UPR0 1127 aa26.88■■□□□ 1.89
SMARCC1-203ENST00000454240 AHCTF1Q8WYP5 2266 aa26.88■■□□□ 1.89
SMARCC1-203ENST00000454240 MDC1Q14676 2089 aaKnown RBP26.88■■□□□ 1.89
SMARCC1-203ENST00000454240 H3BMH7 237 aa26.87■■□□□ 1.89
SMARCC1-203ENST00000454240 DLGAP3O95886 979 aa26.87■■□□□ 1.89
SMARCC1-203ENST00000454240 TUBBP07437 444 aa26.87■■□□□ 1.89
SMARCC1-203ENST00000454240 LIPCP11150 499 aa26.87■■□□□ 1.89
SMARCC1-203ENST00000454240 NPPBP16860 134 aa26.87■■□□□ 1.89
SMARCC1-203ENST00000454240 DEFB110Q30KQ9 67 aa26.87■■□□□ 1.89
SMARCC1-203ENST00000454240 ZNF425Q6IV72 752 aa26.87■■□□□ 1.89
SMARCC1-203ENST00000454240 CNPY4Q8N129 248 aa26.87■■□□□ 1.89
SMARCC1-203ENST00000454240 KCNE4Q8WWG9 221 aa26.87■■□□□ 1.89
SMARCC1-203ENST00000454240 PYCR2Q96C36 320 aa26.87■■□□□ 1.89
SMARCC1-203ENST00000454240 RHBDF1Q96CC6 855 aa26.87■■□□□ 1.89
SMARCC1-203ENST00000454240 GPR78Q96P69 363 aa26.87■■□□□ 1.89
SMARCC1-203ENST00000454240 EGFL8Q99944 293 aa26.87■■□□□ 1.89
SMARCC1-203ENST00000454240 PLCD4Q9BRC7 762 aa26.87■■□□□ 1.89
SMARCC1-203ENST00000454240 DPH1Q9BZG8 443 aa26.87■■□□□ 1.89
SMARCC1-203ENST00000454240 ULBP3Q9BZM4 244 aa26.87■■□□□ 1.89
SMARCC1-203ENST00000454240 VPS11Q9H270 941 aa26.87■■□□□ 1.89
SMARCC1-203ENST00000454240 ALG9Q9H6U8 611 aa26.87■■□□□ 1.89
SMARCC1-203ENST00000454240 PSMC3IPQ9P2W1 217 aaPredicted RBP26.87■■□□□ 1.89
SMARCC1-203ENST00000454240 A0A087WV48 116 aa26.86■■□□□ 1.89
SMARCC1-203ENST00000454240 CCDC189A1A4V9 331 aa26.86■■□□□ 1.89
SMARCC1-203ENST00000454240 NRP2O60462 931 aa26.86■■□□□ 1.89
SMARCC1-203ENST00000454240 CTSVO60911 334 aa26.86■■□□□ 1.89
SMARCC1-203ENST00000454240 CLN3Q13286 438 aa26.86■■□□□ 1.89
SMARCC1-203ENST00000454240 ZC3H12BQ5HYM0 836 aaKnown RBP26.86■■□□□ 1.89
SMARCC1-203ENST00000454240 TIPARPQ7Z3E1 657 aaKnown RBP26.86■■□□□ 1.89
SMARCC1-203ENST00000454240 PAQR7Q86WK9 346 aa26.86■■□□□ 1.89
SMARCC1-203ENST00000454240 MCATQ8IVS2 390 aaKnown RBP26.86■■□□□ 1.89
SMARCC1-203ENST00000454240 RHEBL1Q8TAI7 183 aa26.86■■□□□ 1.89
SMARCC1-203ENST00000454240 ALKBH8Q96BT7 664 aaKnown RBP26.86■■□□□ 1.89
SMARCC1-203ENST00000454240 NAF1Q96HR8 494 aaKnown RBP26.86■■□□□ 1.89
SMARCC1-203ENST00000454240 ATOH8Q96SQ7 321 aa26.86■■□□□ 1.89
SMARCC1-203ENST00000454240 PPCSQ9HAB8 311 aa26.86■■□□□ 1.89
SMARCC1-203ENST00000454240 EURLQ9NYK6 297 aa26.86■■□□□ 1.89
SMARCC1-203ENST00000454240 RNF112Q9ULX5 631 aa26.86■■□□□ 1.89
SMARCC1-203ENST00000454240 SNX7Q9UNH6 387 aa26.86■■□□□ 1.89
SMARCC1-203ENST00000454240 IQANK1A0A1B0GTG1 560 aa26.85■■□□□ 1.89
SMARCC1-203ENST00000454240 SRRM3A6NNA2 597 aaPredicted RBP26.85■■□□□ 1.89
SMARCC1-203ENST00000454240 RRP8O43159 456 aaKnown RBP26.85■■□□□ 1.89
SMARCC1-203ENST00000454240 RFPL1O75677 317 aa26.85■■□□□ 1.89
SMARCC1-203ENST00000454240 KIAA0754O94854 1291 aa26.85■■□□□ 1.89
SMARCC1-203ENST00000454240 ITGA1P56199 1179 aa26.85■■□□□ 1.89
SMARCC1-203ENST00000454240 ACAP2Q15057 778 aa26.85■■□□□ 1.89
SMARCC1-203ENST00000454240 TGIF1Q15583 401 aa26.85■■□□□ 1.89
SMARCC1-203ENST00000454240 ST3GAL2Q16842 350 aa26.85■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms