RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 PRIMA1Q86XR5 153 aa3.91□□□□□ -1.78
HMGN3P1-201ENST00000453847 LAX1Q8IWV1 398 aa3.91□□□□□ -1.78
HMGN3P1-201ENST00000453847 TDHQ8IZJ6 230 aa3.91□□□□□ -1.78
HMGN3P1-201ENST00000453847 FBXW8Q8N3Y1 598 aa3.91□□□□□ -1.78
HMGN3P1-201ENST00000453847 NRACQ8N912 160 aa3.91□□□□□ -1.78
HMGN3P1-201ENST00000453847 CCNYQ8ND76 341 aa3.91□□□□□ -1.78
HMGN3P1-201ENST00000453847 NTN5Q8WTR8 489 aaPredicted RBP3.91□□□□□ -1.78
HMGN3P1-201ENST00000453847 TMEM255BQ8WV15 326 aa3.91□□□□□ -1.78
HMGN3P1-201ENST00000453847 CKAP2Q8WWK9 683 aa3.91□□□□□ -1.78
HMGN3P1-201ENST00000453847 PYCR2Q96C36 320 aa3.91□□□□□ -1.78
HMGN3P1-201ENST00000453847 EEF2KMTQ96G04 330 aa3.91□□□□□ -1.78
HMGN3P1-201ENST00000453847 RBM18Q96H35 190 aaKnown RBP3.91□□□□□ -1.78
HMGN3P1-201ENST00000453847 SAMD8Q96LT4 415 aa3.91□□□□□ -1.78
HMGN3P1-201ENST00000453847 SGK494Q96LW2 274 aa3.91□□□□□ -1.78
HMGN3P1-201ENST00000453847 DCLK3Q9C098 648 aa3.91□□□□□ -1.78
HMGN3P1-201ENST00000453847 TSPYL1Q9H0U9 437 aa3.91□□□□□ -1.78
HMGN3P1-201ENST00000453847 IL25Q9H293 177 aa3.91□□□□□ -1.78
HMGN3P1-201ENST00000453847 TLE6Q9H808 572 aa3.91□□□□□ -1.78
HMGN3P1-201ENST00000453847 GKN1Q9NS71 199 aa3.91□□□□□ -1.78
HMGN3P1-201ENST00000453847 SIX4Q9UIU6 781 aa3.91□□□□□ -1.78
HMGN3P1-201ENST00000453847 NOCTQ9UK39 431 aaKnown RBP3.91□□□□□ -1.78
HMGN3P1-201ENST00000453847 DNPEPQ9ULA0 475 aa3.91□□□□□ -1.78
HMGN3P1-201ENST00000453847 EXOC6BQ9Y2D4 811 aa3.91□□□□□ -1.78
HMGN3P1-201ENST00000453847 DLGAP4Q9Y2H0 992 aa3.91□□□□□ -1.78
HMGN3P1-201ENST00000453847 ATAD2BQ9ULI0 1458 aa3.91□□□□□ -1.78
HMGN3P1-201ENST00000453847 TRBV2A0A0J9YWF9 115 aa3.9□□□□□ -1.79
HMGN3P1-201ENST00000453847 F8VVB4 439 aa3.9□□□□□ -1.79
HMGN3P1-201ENST00000453847 F8VWA3 439 aa3.9□□□□□ -1.79
HMGN3P1-201ENST00000453847 NDC80O14777 642 aa3.9□□□□□ -1.79
HMGN3P1-201ENST00000453847 RNASEH1O60930 286 aaKnown RBP3.9□□□□□ -1.79
HMGN3P1-201ENST00000453847 RPS6KA5O75582 802 aa3.9□□□□□ -1.79
HMGN3P1-201ENST00000453847 PMS2P2O95744 297 aa3.9□□□□□ -1.79
HMGN3P1-201ENST00000453847 BAG3O95817 575 aa3.9□□□□□ -1.79
HMGN3P1-201ENST00000453847 H1F0P07305 194 aaKnown RBP3.9□□□□□ -1.79
HMGN3P1-201ENST00000453847 STAG3L1P0CL83 205 aa3.9□□□□□ -1.79
HMGN3P1-201ENST00000453847 CKMT2P17540 419 aa3.9□□□□□ -1.79
HMGN3P1-201ENST00000453847 UGT1A6P19224 532 aa3.9□□□□□ -1.79
HMGN3P1-201ENST00000453847 FUT1P19526 365 aa3.9□□□□□ -1.79
HMGN3P1-201ENST00000453847 ALDH1B1P30837 517 aa3.9□□□□□ -1.79
HMGN3P1-201ENST00000453847 TKTL1P51854 596 aa3.9□□□□□ -1.79
HMGN3P1-201ENST00000453847 CNN1P51911 297 aaKnown RBP3.9□□□□□ -1.79
HMGN3P1-201ENST00000453847 PGGT1BP53609 377 aa3.9□□□□□ -1.79
HMGN3P1-201ENST00000453847 AKAP17AQ02040 695 aaKnown RBP3.9□□□□□ -1.79
HMGN3P1-201ENST00000453847 SRSF4Q08170 494 aaKnown RBP3.9□□□□□ -1.79
HMGN3P1-201ENST00000453847 TAF10Q12962 218 aa3.9□□□□□ -1.79
HMGN3P1-201ENST00000453847 MYBPHQ13203 477 aa3.9□□□□□ -1.79
HMGN3P1-201ENST00000453847 GK2Q14410 553 aaPredicted RBP3.9□□□□□ -1.79
HMGN3P1-201ENST00000453847 TAF7Q15545 349 aaPredicted RBP3.9□□□□□ -1.79
HMGN3P1-201ENST00000453847 INAQ16352 499 aa3.9□□□□□ -1.79
HMGN3P1-201ENST00000453847 XKR3Q5GH77 459 aa3.9□□□□□ -1.79
HMGN3P1-201ENST00000453847 MTX3Q5HYI7 312 aa3.9□□□□□ -1.79
HMGN3P1-201ENST00000453847 ELFN2Q5R3F8 820 aa3.9□□□□□ -1.79
HMGN3P1-201ENST00000453847 CCNYL2Q5T2Q4 361 aa3.9□□□□□ -1.79
HMGN3P1-201ENST00000453847 MORN5Q5VZ52 161 aa3.9□□□□□ -1.79
HMGN3P1-201ENST00000453847 TRNP1Q6NT89 227 aa3.9□□□□□ -1.79
HMGN3P1-201ENST00000453847 C8orf82Q6P1X6 216 aaPredicted RBP3.9□□□□□ -1.79
HMGN3P1-201ENST00000453847 WDR88Q6ZMY6 472 aa3.9□□□□□ -1.79
HMGN3P1-201ENST00000453847 COLCA1Q6ZS62 124 aa3.9□□□□□ -1.79
HMGN3P1-201ENST00000453847 MARK2Q7KZI7 788 aaKnown RBP3.9□□□□□ -1.79
HMGN3P1-201ENST00000453847 CFAP206Q8IYR0 622 aa3.9□□□□□ -1.79
HMGN3P1-201ENST00000453847 ANKRD20A12PQ8NF67 263 aa3.9□□□□□ -1.79
HMGN3P1-201ENST00000453847 TMEM185AQ8NFB2 350 aa3.9□□□□□ -1.79
HMGN3P1-201ENST00000453847 OR10Q1Q8NGQ4 319 aa3.9□□□□□ -1.79
HMGN3P1-201ENST00000453847 GRHL3Q8TE85 626 aa3.9□□□□□ -1.79
HMGN3P1-201ENST00000453847 ASB5Q8WWX0 329 aa3.9□□□□□ -1.79
HMGN3P1-201ENST00000453847 MYCBPQ99417 103 aaPredicted RBP3.9□□□□□ -1.79
HMGN3P1-201ENST00000453847 KRTAP4-12Q9BQ66 201 aa3.9□□□□□ -1.79
HMGN3P1-201ENST00000453847 CDK19Q9BWU1 502 aa3.9□□□□□ -1.79
HMGN3P1-201ENST00000453847 SLC39A8Q9C0K1 460 aa3.9□□□□□ -1.79
HMGN3P1-201ENST00000453847 WWTR1Q9GZV5 400 aa3.9□□□□□ -1.79
HMGN3P1-201ENST00000453847 SOHLH2Q9NX45 425 aa3.9□□□□□ -1.79
HMGN3P1-201ENST00000453847 ZNF224Q9NZL3 707 aa3.9□□□□□ -1.79
HMGN3P1-201ENST00000453847 CGNQ9P2M7 1197 aaKnown RBP3.9□□□□□ -1.79
HMGN3P1-201ENST00000453847 FOXA2Q9Y261 457 aaPredicted RBP3.9□□□□□ -1.79
HMGN3P1-201ENST00000453847 PLEKHA6Q9Y2H5 1048 aa3.9□□□□□ -1.79
HMGN3P1-201ENST00000453847 ZNF510Q9Y2H8 683 aa3.9□□□□□ -1.79
HMGN3P1-201ENST00000453847 BUD23O43709 281 aaKnown RBP3.89□□□□□ -1.79
HMGN3P1-201ENST00000453847 SNX3O60493 162 aa3.89□□□□□ -1.79
HMGN3P1-201ENST00000453847 PRDM1O75626 825 aa3.89□□□□□ -1.79
HMGN3P1-201ENST00000453847 RAD51DO75771 328 aa3.89□□□□□ -1.79
HMGN3P1-201ENST00000453847 OR6B1O95007 311 aa3.89□□□□□ -1.79
HMGN3P1-201ENST00000453847 SYF2O95926 243 aaKnown RBP3.89□□□□□ -1.79
HMGN3P1-201ENST00000453847 MT-ATP6P00846 226 aa3.89□□□□□ -1.79
HMGN3P1-201ENST00000453847 SP9P0CG40 484 aa3.89□□□□□ -1.79
HMGN3P1-201ENST00000453847 PSG1P11464 419 aa3.89□□□□□ -1.79
HMGN3P1-201ENST00000453847 CD59P13987 128 aa3.89□□□□□ -1.79
HMGN3P1-201ENST00000453847 AREGP15514 252 aa3.89□□□□□ -1.79
HMGN3P1-201ENST00000453847 ELAVL4P26378 380 aaKnown RBP3.89□□□□□ -1.79
HMGN3P1-201ENST00000453847 MNDAP41218 407 aa3.89□□□□□ -1.79
HMGN3P1-201ENST00000453847 VAMP7P51809 220 aa3.89□□□□□ -1.79
HMGN3P1-201ENST00000453847 SRP54P61011 504 aaKnown RBP3.89□□□□□ -1.79
HMGN3P1-201ENST00000453847 KCNJ10P78508 379 aa3.89□□□□□ -1.79
HMGN3P1-201ENST00000453847 RPL24P83731 157 aaKnown RBP3.89□□□□□ -1.79
HMGN3P1-201ENST00000453847 EEF1A2Q05639 463 aaKnown RBP3.89□□□□□ -1.79
HMGN3P1-201ENST00000453847 SULT2A1Q06520 285 aa3.89□□□□□ -1.79
HMGN3P1-201ENST00000453847 DLG1Q12959 904 aa3.89□□□□□ -1.79
HMGN3P1-201ENST00000453847 KLF9Q13886 244 aaPredicted RBP3.89□□□□□ -1.79
HMGN3P1-201ENST00000453847 KARSQ15046 597 aaKnown RBP3.89□□□□□ -1.79
HMGN3P1-201ENST00000453847 CEBPEQ15744 281 aa3.89□□□□□ -1.79
HMGN3P1-201ENST00000453847 STXBP2Q15833 593 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms