RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 ALAS2P22557 587 aa18.56■□□□□ 0.56
USP40-207ENST00000450940 MCM3P25205 808 aa18.56■□□□□ 0.56
USP40-207ENST00000450940 CMPK1P30085 196 aa18.56■□□□□ 0.56
USP40-207ENST00000450940 PNLIPRP1P54315 467 aa18.56■□□□□ 0.56
USP40-207ENST00000450940 YBX1P67809 324 aaKnown RBP18.56■□□□□ 0.56
USP40-207ENST00000450940 TIAL1Q01085 375 aaKnown RBP eCLIP18.56■□□□□ 0.56
USP40-207ENST00000450940 DHX9Q08211 1270 aaKnown RBP18.56■□□□□ 0.56
USP40-207ENST00000450940 CUL1Q13616 776 aa18.56■□□□□ 0.56
USP40-207ENST00000450940 SPANXN3Q5MJ09 141 aa18.56■□□□□ 0.56
USP40-207ENST00000450940 WASHC2DQ5SRD0 308 aa18.56■□□□□ 0.56
USP40-207ENST00000450940 FRMPD2BQ6IN97 320 aa18.56■□□□□ 0.56
USP40-207ENST00000450940 CNTN4Q8IWV2 1026 aa18.56■□□□□ 0.56
USP40-207ENST00000450940 ZNF480Q8WV37 535 aa18.56■□□□□ 0.56
USP40-207ENST00000450940 RUNDC3BQ96NL0 473 aa18.56■□□□□ 0.56
USP40-207ENST00000450940 DPH7Q9BTV6 452 aa18.56■□□□□ 0.56
USP40-207ENST00000450940 SLC6A20Q9NP91 592 aa18.56■□□□□ 0.56
USP40-207ENST00000450940 IARS2Q9NSE4 1012 aaKnown RBP18.56■□□□□ 0.56
USP40-207ENST00000450940 LOC105369274A0A096LPK9 316 aa18.55■□□□□ 0.56
USP40-207ENST00000450940 IGKV1-8A0A0C4DH67 115 aa18.55■□□□□ 0.56
USP40-207ENST00000450940 LOC102723532A0A0G2JNH3 316 aa18.55■□□□□ 0.56
USP40-207ENST00000450940 E7ENX8 843 aa18.55■□□□□ 0.56
USP40-207ENST00000450940 SMAPO00193 183 aa18.55■□□□□ 0.56
USP40-207ENST00000450940 NRP2O60462 931 aa18.55■□□□□ 0.56
USP40-207ENST00000450940 SLC16A8O95907 504 aa18.55■□□□□ 0.56
USP40-207ENST00000450940 IGHEP01854 428 aa18.55■□□□□ 0.56
USP40-207ENST00000450940 GABRB3P28472 473 aa18.55■□□□□ 0.56
USP40-207ENST00000450940 OTX2P32243 289 aa18.55■□□□□ 0.56
USP40-207ENST00000450940 EMP3P54852 163 aa18.55■□□□□ 0.56
USP40-207ENST00000450940 VSX2P58304 361 aaPredicted RBP18.55■□□□□ 0.56
USP40-207ENST00000450940 GNG11P61952 73 aa18.55■□□□□ 0.56
USP40-207ENST00000450940 TAP2Q03519 686 aa18.55■□□□□ 0.56
USP40-207ENST00000450940 RELAQ04206 551 aa18.55■□□□□ 0.56
USP40-207ENST00000450940 PRDX1Q06830 199 aaKnown RBP18.55■□□□□ 0.56
USP40-207ENST00000450940 SLC9A5Q14940 896 aa18.55■□□□□ 0.56
USP40-207ENST00000450940 MORF4L2Q15014 288 aa18.55■□□□□ 0.56
USP40-207ENST00000450940 SUSD1Q6UWL2 747 aa18.55■□□□□ 0.56
USP40-207ENST00000450940 COX15Q7KZN9 410 aa18.55■□□□□ 0.56
USP40-207ENST00000450940 PPP1R32Q7Z5V6 425 aa18.55■□□□□ 0.56
USP40-207ENST00000450940 GALNT7Q86SF2 657 aa18.55■□□□□ 0.56
USP40-207ENST00000450940 PAQR7Q86WK9 346 aa18.55■□□□□ 0.56
USP40-207ENST00000450940 HPS6Q86YV9 775 aa18.55■□□□□ 0.56
USP40-207ENST00000450940 IGDCC3Q8IVU1 814 aa18.55■□□□□ 0.56
USP40-207ENST00000450940 SPNS2Q8IVW8 549 aa18.55■□□□□ 0.56
USP40-207ENST00000450940 LRRC56Q8IYG6 542 aaPredicted RBP18.55■□□□□ 0.56
USP40-207ENST00000450940 OR4N4Q8N0Y3 316 aa18.55■□□□□ 0.56
USP40-207ENST00000450940 TTC29Q8NA56 475 aaPredicted RBP18.55■□□□□ 0.56
USP40-207ENST00000450940 FDCSPQ8NFU4 85 aa18.55■□□□□ 0.56
USP40-207ENST00000450940 GABPB2Q8TAK5 448 aaPredicted RBP18.55■□□□□ 0.56
USP40-207ENST00000450940 ZFYVE21Q9BQ24 234 aa18.55■□□□□ 0.56
USP40-207ENST00000450940 PLCD4Q9BRC7 762 aa18.55■□□□□ 0.56
USP40-207ENST00000450940 PLAC1Q9HBJ0 212 aa18.55■□□□□ 0.56
USP40-207ENST00000450940 ZNF451Q9Y4E5 1061 aa18.55■□□□□ 0.56
USP40-207ENST00000450940 HYKKA2RU49 373 aa18.54■□□□□ 0.56
USP40-207ENST00000450940 ZBTB14O43829 449 aa18.54■□□□□ 0.56
USP40-207ENST00000450940 VPS26AO75436 327 aa18.54■□□□□ 0.56
USP40-207ENST00000450940 BANF1O75531 89 aa18.54■□□□□ 0.56
USP40-207ENST00000450940 ERVK-10P10266 1014 aa18.54■□□□□ 0.56
USP40-207ENST00000450940 RPA3P35244 121 aaPredicted RBP18.54■□□□□ 0.56
USP40-207ENST00000450940 SOX8P57073 446 aa18.54■□□□□ 0.56
USP40-207ENST00000450940 DCAF10Q5QP82 559 aa18.54■□□□□ 0.56
USP40-207ENST00000450940 ZNF425Q6IV72 752 aa18.54■□□□□ 0.56
USP40-207ENST00000450940 LRRC8EQ6NSJ5 796 aa18.54■□□□□ 0.56
USP40-207ENST00000450940 KIAA0408Q6ZU52 694 aa18.54■□□□□ 0.56
USP40-207ENST00000450940 TMEM151BQ8IW70 566 aa18.54■□□□□ 0.56
USP40-207ENST00000450940 CPNE9Q8IYJ1 553 aa18.54■□□□□ 0.56
USP40-207ENST00000450940 FER1L6-AS2Q96M78 137 aa18.54■□□□□ 0.56
USP40-207ENST00000450940 SMAD5Q99717 465 aaKnown RBP18.54■□□□□ 0.56
USP40-207ENST00000450940 NUDT9Q9BW91 350 aa18.54■□□□□ 0.56
USP40-207ENST00000450940 ACAT2Q9BWD1 397 aa18.54■□□□□ 0.56
USP40-207ENST00000450940 MRPS30Q9NP92 439 aaKnown RBP18.54■□□□□ 0.56
USP40-207ENST00000450940 SAR1BQ9Y6B6 198 aa18.54■□□□□ 0.56
USP40-207ENST00000450940 A0A0J9YVX5 310 aa18.53■□□□□ 0.56
USP40-207ENST00000450940 VSTM2BA6NLU5 285 aa18.53■□□□□ 0.56
USP40-207ENST00000450940 MED26O95402 600 aa18.53■□□□□ 0.56
USP40-207ENST00000450940 AHSGP02765 367 aa18.53■□□□□ 0.56
USP40-207ENST00000450940 MMP11P24347 488 aa18.53■□□□□ 0.56
USP40-207ENST00000450940 CD97P48960 835 aa18.53■□□□□ 0.56
USP40-207ENST00000450940 FOXL2P58012 376 aa18.53■□□□□ 0.56
USP40-207ENST00000450940 ABATP80404 500 aa18.53■□□□□ 0.56
USP40-207ENST00000450940 DR1Q01658 176 aa18.53■□□□□ 0.56
USP40-207ENST00000450940 IGFBP7Q16270 282 aa18.53■□□□□ 0.56
USP40-207ENST00000450940 NKG7Q16617 165 aa18.53■□□□□ 0.56
USP40-207ENST00000450940 PRTGQ2VWP7 1150 aa18.53■□□□□ 0.56
USP40-207ENST00000450940 COLEC12Q5KU26 742 aa18.53■□□□□ 0.56
USP40-207ENST00000450940 ICE2Q659A1 982 aa18.53■□□□□ 0.56
USP40-207ENST00000450940 UGT3A1Q6NUS8 523 aa18.53■□□□□ 0.56
USP40-207ENST00000450940 HIBCHQ6NVY1 386 aaPredicted RBP18.53■□□□□ 0.56
USP40-207ENST00000450940 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.53■□□□□ 0.56
USP40-207ENST00000450940 ANP32BQ92688 251 aaKnown RBP18.53■□□□□ 0.56
USP40-207ENST00000450940 MIB2Q96AX9 1013 aa18.53■□□□□ 0.56
USP40-207ENST00000450940 LRRC39Q96DD0 335 aa18.53■□□□□ 0.56
USP40-207ENST00000450940 CAPZA3Q96KX2 299 aa18.53■□□□□ 0.56
USP40-207ENST00000450940 SPSB2Q99619 263 aa18.53■□□□□ 0.56
USP40-207ENST00000450940 NAPGQ99747 312 aaPredicted RBP18.53■□□□□ 0.56
USP40-207ENST00000450940 P4HTMQ9NXG6 502 aa18.53■□□□□ 0.56
USP40-207ENST00000450940 ZC3H7BQ9UGR2 993 aaKnown RBP18.53■□□□□ 0.56
USP40-207ENST00000450940 PRRC2CQ9Y520 2896 aaKnown RBP18.53■□□□□ 0.56
USP40-207ENST00000450940 DOCK10Q96BY6 2186 aa18.52■□□□□ 0.56
USP40-207ENST00000450940 H0YGG7 62 aa18.52■□□□□ 0.56
USP40-207ENST00000450940 CCDC188H7C350 402 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms