RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 CERS5Q8N5B7 392 aa8.4□□□□□ -1.07
LSM5-208ENST00000450169 C2CD4AQ8NCU7 369 aaPredicted RBP8.4□□□□□ -1.07
LSM5-208ENST00000450169 OR8J3Q8NGG0 315 aa8.4□□□□□ -1.07
LSM5-208ENST00000450169 CHURC1Q8WUH1 139 aa8.4□□□□□ -1.07
LSM5-208ENST00000450169 ANKRD49Q8WVL7 239 aa8.4□□□□□ -1.07
LSM5-208ENST00000450169 CLEC4DQ8WXI8 215 aa8.4□□□□□ -1.07
LSM5-208ENST00000450169 CENPIQ92674 756 aaPredicted RBP8.4□□□□□ -1.07
LSM5-208ENST00000450169 EXT2Q93063 718 aa8.4□□□□□ -1.07
LSM5-208ENST00000450169 WNT2BQ93097 391 aa8.4□□□□□ -1.07
LSM5-208ENST00000450169 GPRASP2Q96D09 838 aa8.4□□□□□ -1.07
LSM5-208ENST00000450169 SGTBQ96EQ0 304 aa8.4□□□□□ -1.07
LSM5-208ENST00000450169 C1orf74Q96LT6 269 aa8.4□□□□□ -1.07
LSM5-208ENST00000450169 TSEN34Q9BSV6 310 aaKnown RBP8.4□□□□□ -1.07
LSM5-208ENST00000450169 C11orf84Q9BUA3 381 aaPredicted RBP8.4□□□□□ -1.07
LSM5-208ENST00000450169 DEFB129Q9H1M3 183 aa8.4□□□□□ -1.07
LSM5-208ENST00000450169 SLC6A15Q9H2J7 730 aa8.4□□□□□ -1.07
LSM5-208ENST00000450169 ELOVL6Q9H5J4 265 aa8.4□□□□□ -1.07
LSM5-208ENST00000450169 UBP1Q9NZI7 540 aa8.4□□□□□ -1.07
LSM5-208ENST00000450169 PSORS1C1Q9UIG5 152 aa8.4□□□□□ -1.07
LSM5-208ENST00000450169 FCF1Q9Y324 198 aaKnown RBP8.4□□□□□ -1.07
LSM5-208ENST00000450169 PRELID3BQ9Y3B1 194 aa8.4□□□□□ -1.07
LSM5-208ENST00000450169 SIP14410 1827 aa8.39□□□□□ -1.07
LSM5-208ENST00000450169 A0A1B0GVM2 712 aa8.39□□□□□ -1.07
LSM5-208ENST00000450169 CXCR6O00574 342 aa8.39□□□□□ -1.07
LSM5-208ENST00000450169 NCAM2O15394 837 aa8.39□□□□□ -1.07
LSM5-208ENST00000450169 PLA2G10O15496 165 aa8.39□□□□□ -1.07
LSM5-208ENST00000450169 PROM1O43490 865 aa8.39□□□□□ -1.07
LSM5-208ENST00000450169 ADAM11O75078 769 aa8.39□□□□□ -1.07
LSM5-208ENST00000450169 RGS20O76081 388 aa8.39□□□□□ -1.07
LSM5-208ENST00000450169 SIX3O95343 332 aaPredicted RBP8.39□□□□□ -1.07
LSM5-208ENST00000450169 ADH1BP00325 375 aa8.39□□□□□ -1.07
LSM5-208ENST00000450169 PTHP01270 115 aa8.39□□□□□ -1.07
LSM5-208ENST00000450169 FHP07954 510 aa8.39□□□□□ -1.07
LSM5-208ENST00000450169 PRR35P0CG20 571 aa8.39□□□□□ -1.07
LSM5-208ENST00000450169 NFKB1P19838 968 aa8.39□□□□□ -1.07
LSM5-208ENST00000450169 RAB3AP20336 220 aa8.39□□□□□ -1.07
LSM5-208ENST00000450169 ZP3P21754 424 aa8.39□□□□□ -1.07
LSM5-208ENST00000450169 HOXA9P31269 272 aa8.39□□□□□ -1.07
LSM5-208ENST00000450169 SLC19A1P41440 591 aa8.39□□□□□ -1.07
LSM5-208ENST00000450169 CRISP3P54108 245 aa8.39□□□□□ -1.07
LSM5-208ENST00000450169 CYP4F2P78329 520 aa8.39□□□□□ -1.07
LSM5-208ENST00000450169 RBP5P82980 135 aa8.39□□□□□ -1.07
LSM5-208ENST00000450169 CYP4F3Q08477 520 aa8.39□□□□□ -1.07
LSM5-208ENST00000450169 GRM7Q14831 915 aa8.39□□□□□ -1.07
LSM5-208ENST00000450169 LARS2Q15031 903 aaKnown RBP8.39□□□□□ -1.07
LSM5-208ENST00000450169 GLYR1Q49A26 553 aaPredicted RBP8.39□□□□□ -1.07
LSM5-208ENST00000450169 PCID2Q5JVF3 399 aa8.39□□□□□ -1.07
LSM5-208ENST00000450169 NAPEPLDQ6IQ20 393 aa8.39□□□□□ -1.07
LSM5-208ENST00000450169 RETSATQ6NUM9 610 aa8.39□□□□□ -1.07
LSM5-208ENST00000450169 KLHL17Q6TDP4 642 aa8.39□□□□□ -1.07
LSM5-208ENST00000450169 CEP68Q76N32 757 aa8.39□□□□□ -1.07
LSM5-208ENST00000450169 TIGD4Q8IY51 512 aa8.39□□□□□ -1.07
LSM5-208ENST00000450169 LILRB2Q8N423 598 aa8.39□□□□□ -1.07
LSM5-208ENST00000450169 C12orf29Q8N999 325 aa8.39□□□□□ -1.07
LSM5-208ENST00000450169 FAM181AQ8N9Y4 354 aa8.39□□□□□ -1.07
LSM5-208ENST00000450169 OR7G3Q8NG95 312 aa8.39□□□□□ -1.07
LSM5-208ENST00000450169 OR8K3Q8NH51 312 aa8.39□□□□□ -1.07
LSM5-208ENST00000450169 PROKR1Q8TCW9 393 aa8.39□□□□□ -1.07
LSM5-208ENST00000450169 ZNF431Q8TF32 576 aaPredicted RBP8.39□□□□□ -1.07
LSM5-208ENST00000450169 RNF139Q8WU17 664 aa8.39□□□□□ -1.07
LSM5-208ENST00000450169 PCNPQ8WW12 178 aaKnown RBP8.39□□□□□ -1.07
LSM5-208ENST00000450169 SIPA1Q96FS4 1042 aa8.39□□□□□ -1.07
LSM5-208ENST00000450169 TEPSINQ96N21 525 aa8.39□□□□□ -1.07
LSM5-208ENST00000450169 COL21A1Q96P44 957 aa8.39□□□□□ -1.07
LSM5-208ENST00000450169 MYOCQ99972 504 aa8.39□□□□□ -1.07
LSM5-208ENST00000450169 B3GNT5Q9BYG0 378 aa8.39□□□□□ -1.07
LSM5-208ENST00000450169 BARHL1Q9BZE3 327 aa8.39□□□□□ -1.07
LSM5-208ENST00000450169 RACGAP1Q9H0H5 632 aa8.39□□□□□ -1.07
LSM5-208ENST00000450169 PORCNQ9H237 461 aa8.39□□□□□ -1.07
LSM5-208ENST00000450169 OR51B5Q9H339 312 aa8.39□□□□□ -1.07
LSM5-208ENST00000450169 PTPRHQ9HD43 1115 aa8.39□□□□□ -1.07
LSM5-208ENST00000450169 IL1RAPQ9NPH3 570 aa8.39□□□□□ -1.07
LSM5-208ENST00000450169 PCDHB16Q9NRJ7 776 aa8.39□□□□□ -1.07
LSM5-208ENST00000450169 ZIM2Q9NZV7 527 aa8.39□□□□□ -1.07
LSM5-208ENST00000450169 PCDHGB3Q9Y5G1 929 aa8.39□□□□□ -1.07
LSM5-208ENST00000450169 TNPO3Q9Y5L0 923 aaKnown RBP8.39□□□□□ -1.07
LSM5-208ENST00000450169 UBA6A0AVT1 1052 aaPredicted RBP8.38□□□□□ -1.07
LSM5-208ENST00000450169 ELOVL7A1L3X0 281 aa8.38□□□□□ -1.07
LSM5-208ENST00000450169 CLCA1A8K7I4 914 aa8.38□□□□□ -1.07
LSM5-208ENST00000450169 PRSS44E7EML9 344 aa8.38□□□□□ -1.07
LSM5-208ENST00000450169 KHNYNO15037 678 aaKnown RBP8.38□□□□□ -1.07
LSM5-208ENST00000450169 FABP7O15540 132 aa8.38□□□□□ -1.07
LSM5-208ENST00000450169 PMPCBO75439 489 aa8.38□□□□□ -1.07
LSM5-208ENST00000450169 CRCPO75575 148 aa8.38□□□□□ -1.07
LSM5-208ENST00000450169 SCELO95171 688 aa8.38□□□□□ -1.07
LSM5-208ENST00000450169 WDPCPO95876 746 aa8.38□□□□□ -1.07
LSM5-208ENST00000450169 IFNA7P01567 189 aa8.38□□□□□ -1.07
LSM5-208ENST00000450169 INHAP05111 366 aa8.38□□□□□ -1.07
LSM5-208ENST00000450169 CLCNKAP51800 687 aa8.38□□□□□ -1.07
LSM5-208ENST00000450169 BLVRAP53004 296 aa8.38□□□□□ -1.07
LSM5-208ENST00000450169 COX10Q12887 443 aa8.38□□□□□ -1.07
LSM5-208ENST00000450169 PCBP1Q15365 356 aaKnown RBP eCLIP8.38□□□□□ -1.07
LSM5-208ENST00000450169 GOLGA7BQ2TAP0 167 aa8.38□□□□□ -1.07
LSM5-208ENST00000450169 COL28A1Q2UY09 1125 aa8.38□□□□□ -1.07
LSM5-208ENST00000450169 HABP4Q5JVS0 413 aaKnown RBP8.38□□□□□ -1.07
LSM5-208ENST00000450169 ESRP1Q6NXG1 681 aaKnown RBP8.38□□□□□ -1.07
LSM5-208ENST00000450169 ZPBP2Q6X784 338 aa8.38□□□□□ -1.07
LSM5-208ENST00000450169 FAM126BQ8IXS8 530 aa8.38□□□□□ -1.07
LSM5-208ENST00000450169 PM20D2Q8IYS1 436 aa8.38□□□□□ -1.07
LSM5-208ENST00000450169 PTGR2Q8N8N7 351 aaPredicted RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms