RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 CACNA1DQ01668 2161 aa27.01■■□□□ 1.91
CBX4-202ENST00000448310 VSTM2BA6NLU5 285 aa27.01■■□□□ 1.91
CBX4-202ENST00000448310 TRIP13Q15645 432 aaPredicted RBP27.01■■□□□ 1.91
CBX4-202ENST00000448310 TYSND1Q2T9J0 566 aa27.01■■□□□ 1.91
CBX4-202ENST00000448310 EEF1AKMT2Q5JPI9 291 aaKnown RBP27.01■■□□□ 1.91
CBX4-202ENST00000448310 SDCCAG8Q86SQ7 713 aaPredicted RBP27.01■■□□□ 1.91
CBX4-202ENST00000448310 OR11G2Q8NGC1 345 aa27.01■■□□□ 1.91
CBX4-202ENST00000448310 MAGEC3Q8TD91 643 aa27.01■■□□□ 1.91
CBX4-202ENST00000448310 CRB3Q9BUF7 120 aa27.01■■□□□ 1.91
CBX4-202ENST00000448310 ZNF304Q9HCX3 659 aa27.01■■□□□ 1.91
CBX4-202ENST00000448310 SEMA3GQ9NS98 782 aa27.01■■□□□ 1.91
CBX4-202ENST00000448310 IL1RAPL1Q9NZN1 696 aa27.01■■□□□ 1.91
CBX4-202ENST00000448310 SPATA7Q9P0W8 599 aa27.01■■□□□ 1.91
CBX4-202ENST00000448310 SOX13Q9UN79 622 aa27.01■■□□□ 1.91
CBX4-202ENST00000448310 NOVA2Q9UNW9 492 aaKnown RBP27.01■■□□□ 1.91
CBX4-202ENST00000448310 AP3B1O00203 1094 aa27■■□□□ 1.91
CBX4-202ENST00000448310 MATN4O95460 622 aa27■■□□□ 1.91
CBX4-202ENST00000448310 TPSB2P20231 275 aa27■■□□□ 1.91
CBX4-202ENST00000448310 Q0VFX4 171 aa27■■□□□ 1.91
CBX4-202ENST00000448310 GBX1Q14549 363 aa27■■□□□ 1.91
CBX4-202ENST00000448310 TPSAB1Q15661 275 aa27■■□□□ 1.91
CBX4-202ENST00000448310 ACSBG2Q5FVE4 666 aa27■■□□□ 1.91
CBX4-202ENST00000448310 AGAP7PQ5VUJ5 663 aa27■■□□□ 1.91
CBX4-202ENST00000448310 IRAK1BP1Q5VVH5 260 aa27■■□□□ 1.91
CBX4-202ENST00000448310 SUSD1Q6UWL2 747 aa27■■□□□ 1.91
CBX4-202ENST00000448310 LURAP1LQ8IV03 231 aa27■■□□□ 1.91
CBX4-202ENST00000448310 STT3BQ8TCJ2 826 aa27■■□□□ 1.91
CBX4-202ENST00000448310 PPP4R1Q8TF05 950 aa27■■□□□ 1.91
CBX4-202ENST00000448310 AGAP4Q96P64 663 aa27■■□□□ 1.91
CBX4-202ENST00000448310 TRIM56Q9BRZ2 755 aaKnown RBP27■■□□□ 1.91
CBX4-202ENST00000448310 DPH7Q9BTV6 452 aa27■■□□□ 1.91
CBX4-202ENST00000448310 ZKSCAN5Q9Y2L8 839 aa27■■□□□ 1.91
CBX4-202ENST00000448310 POLEQ07864 2286 aa26.99■■□□□ 1.91
CBX4-202ENST00000448310 OR2A25A4D2G3 310 aa26.99■■□□□ 1.91
CBX4-202ENST00000448310 ARHGEF33A8MVX0 844 aa26.99■■□□□ 1.91
CBX4-202ENST00000448310 GOLGA6L6A8MZA4 724 aa26.99■■□□□ 1.91
CBX4-202ENST00000448310 AVILO75366 819 aa26.99■■□□□ 1.91
CBX4-202ENST00000448310 LDLRP01130 860 aa26.99■■□□□ 1.91
CBX4-202ENST00000448310 F7P08709 466 aaPredicted RBP26.99■■□□□ 1.91
CBX4-202ENST00000448310 CHRM3P20309 590 aa26.99■■□□□ 1.91
CBX4-202ENST00000448310 COL8A1P27658 744 aa26.99■■□□□ 1.91
CBX4-202ENST00000448310 VPS41P49754 854 aa26.99■■□□□ 1.91
CBX4-202ENST00000448310 KLC1Q07866 573 aa26.99■■□□□ 1.91
CBX4-202ENST00000448310 ELOAQ14241 798 aaKnown RBP26.99■■□□□ 1.91
CBX4-202ENST00000448310 RNF187Q5TA31 235 aaPredicted RBP26.99■■□□□ 1.91
CBX4-202ENST00000448310 SPNS2Q8IVW8 549 aa26.99■■□□□ 1.91
CBX4-202ENST00000448310 OR9A1PQ8NGU1 263 aa26.99■■□□□ 1.91
CBX4-202ENST00000448310 DNAJB14Q8TBM8 379 aa26.99■■□□□ 1.91
CBX4-202ENST00000448310 THOC3Q96J01 351 aaKnown RBP26.99■■□□□ 1.91
CBX4-202ENST00000448310 CNDP1Q96KN2 507 aa26.99■■□□□ 1.91
CBX4-202ENST00000448310 C10orf90Q96M02 699 aa26.99■■□□□ 1.91
CBX4-202ENST00000448310 BARD1Q99728 777 aaKnown RBP26.99■■□□□ 1.91
CBX4-202ENST00000448310 LHPPQ9H008 270 aa26.99■■□□□ 1.91
CBX4-202ENST00000448310 SYNPO2LQ9H987 977 aa26.99■■□□□ 1.91
CBX4-202ENST00000448310 CENPEQ02224 2701 aa26.99■■□□□ 1.91
CBX4-202ENST00000448310 ZGRF1Q86YA3 2104 aa26.98■■□□□ 1.91
CBX4-202ENST00000448310 CLDN1O95832 211 aa26.98■■□□□ 1.91
CBX4-202ENST00000448310 ESR1P03372 595 aa26.98■■□□□ 1.91
CBX4-202ENST00000448310 CMPK1P30085 196 aa26.98■■□□□ 1.91
CBX4-202ENST00000448310 TSTA3Q13630 321 aaPredicted RBP26.98■■□□□ 1.91
CBX4-202ENST00000448310 FBXO42Q6P3S6 717 aa26.98■■□□□ 1.91
CBX4-202ENST00000448310 IGFL2Q6UWQ7 119 aa26.98■■□□□ 1.91
CBX4-202ENST00000448310 MAIP1Q8WWC4 291 aa26.98■■□□□ 1.91
CBX4-202ENST00000448310 MIEF2Q96C03 454 aa26.98■■□□□ 1.91
CBX4-202ENST00000448310 C8orf44Q96CB5 159 aa26.98■■□□□ 1.91
CBX4-202ENST00000448310 ZFYVE21Q9BQ24 234 aa26.98■■□□□ 1.91
CBX4-202ENST00000448310 SLC5A6Q9Y289 635 aa26.98■■□□□ 1.91
CBX4-202ENST00000448310 DIDO1Q9BTC0 2240 aaKnown RBP26.97■■□□□ 1.91
CBX4-202ENST00000448310 WIPF3A6NGB9 483 aa26.97■■□□□ 1.91
CBX4-202ENST00000448310 H0YGG7 62 aa26.97■■□□□ 1.91
CBX4-202ENST00000448310 H3BMM5 538 aa26.97■■□□□ 1.91
CBX4-202ENST00000448310 FFAR3O14843 346 aa26.97■■□□□ 1.91
CBX4-202ENST00000448310 GPR42O15529 346 aa26.97■■□□□ 1.91
CBX4-202ENST00000448310 CEP104O60308 925 aa26.97■■□□□ 1.91
CBX4-202ENST00000448310 ZGLP1P0C6A0 271 aa26.97■■□□□ 1.91
CBX4-202ENST00000448310 ERVK-10P10266 1014 aa26.97■■□□□ 1.91
CBX4-202ENST00000448310 ATP5DP30049 168 aa26.97■■□□□ 1.91
CBX4-202ENST00000448310 CXCR5P32302 372 aa26.97■■□□□ 1.91
CBX4-202ENST00000448310 ARF3P61204 181 aaPredicted RBP26.97■■□□□ 1.91
CBX4-202ENST00000448310 CDK16Q00536 496 aa26.97■■□□□ 1.91
CBX4-202ENST00000448310 OCA2Q04671 838 aa26.97■■□□□ 1.91
CBX4-202ENST00000448310 KLHL38Q2WGJ6 581 aa26.97■■□□□ 1.91
CBX4-202ENST00000448310 VWA2Q5GFL6 755 aa26.97■■□□□ 1.91
CBX4-202ENST00000448310 KIAA0930Q6ICG6 404 aaPredicted RBP26.97■■□□□ 1.91
CBX4-202ENST00000448310 PRMT9Q6P2P2 845 aa26.97■■□□□ 1.91
CBX4-202ENST00000448310 CABS1Q96KC9 395 aa26.97■■□□□ 1.91
CBX4-202ENST00000448310 TCF12Q99081 682 aa26.97■■□□□ 1.91
CBX4-202ENST00000448310 ZNF160Q9HCG1 818 aa26.97■■□□□ 1.91
CBX4-202ENST00000448310 ZNF282Q9UDV7 671 aaPredicted RBP26.97■■□□□ 1.91
CBX4-202ENST00000448310 C3orf18Q9UK00 162 aa26.97■■□□□ 1.91
CBX4-202ENST00000448310 PFDN6O15212 129 aa26.96■■□□□ 1.91
CBX4-202ENST00000448310 ERGP11308 486 aa26.96■■□□□ 1.91
CBX4-202ENST00000448310 OGNP20774 298 aaKnown RBP26.96■■□□□ 1.91
CBX4-202ENST00000448310 FBLP22087 321 aaKnown RBP26.96■■□□□ 1.91
CBX4-202ENST00000448310 CARSP49589 748 aaKnown RBP26.96■■□□□ 1.91
CBX4-202ENST00000448310 KCNJ11Q14654 390 aa26.96■■□□□ 1.91
CBX4-202ENST00000448310 MUM1Q2TAK8 710 aa26.96■■□□□ 1.91
CBX4-202ENST00000448310 ANKRD20A4Q4UJ75 823 aa26.96■■□□□ 1.91
CBX4-202ENST00000448310 LINC00696Q6ZRV3 163 aa26.96■■□□□ 1.91
CBX4-202ENST00000448310 CENPUQ71F23 418 aa26.96■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms