RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 INAVAQ3KP66 663 aa18.55■□□□□ 0.56
SDCBP-204ENST00000447182 UBE2UQ5VVX9 321 aa18.55■□□□□ 0.56
SDCBP-204ENST00000447182 LRRC70Q7Z2Q7 622 aa18.55■□□□□ 0.56
SDCBP-204ENST00000447182 KIAA1958Q8N8K9 716 aa18.55■□□□□ 0.56
SDCBP-204ENST00000447182 NELL1Q92832 810 aa18.55■□□□□ 0.56
SDCBP-204ENST00000447182 RHNO1Q9BSD3 238 aa18.55■□□□□ 0.56
SDCBP-204ENST00000447182 KCTD5Q9NXV2 234 aa18.55■□□□□ 0.56
SDCBP-204ENST00000447182 CRLS1Q9UJA2 301 aa18.55■□□□□ 0.56
SDCBP-204ENST00000447182 OR51B4Q9Y5P0 310 aa18.55■□□□□ 0.56
SDCBP-204ENST00000447182 SERTM1A2A2V5 107 aa18.55■□□□□ 0.56
SDCBP-204ENST00000447182 KCNK5O95279 499 aa18.55■□□□□ 0.56
SDCBP-204ENST00000447182 GPX2P18283 190 aa18.55■□□□□ 0.56
SDCBP-204ENST00000447182 CD40LGP29965 261 aa18.55■□□□□ 0.56
SDCBP-204ENST00000447182 KDELR2P33947 212 aa18.55■□□□□ 0.56
SDCBP-204ENST00000447182 KRT20P35900 424 aa18.55■□□□□ 0.56
SDCBP-204ENST00000447182 KIR3DL1P43629 444 aa18.55■□□□□ 0.56
SDCBP-204ENST00000447182 RPIAP49247 311 aa18.55■□□□□ 0.56
SDCBP-204ENST00000447182 CSNK2BP67870 215 aa18.55■□□□□ 0.56
SDCBP-204ENST00000447182 VLDLRP98155 873 aa18.55■□□□□ 0.56
SDCBP-204ENST00000447182 IL1RL1Q01638 556 aa18.55■□□□□ 0.56
SDCBP-204ENST00000447182 SMN1Q16637 294 aaKnown RBP18.55■□□□□ 0.56
SDCBP-204ENST00000447182 FAHD1Q6P587 224 aa18.55■□□□□ 0.56
SDCBP-204ENST00000447182 GPR155Q7Z3F1 870 aa18.55■□□□□ 0.56
SDCBP-204ENST00000447182 HORMAD1Q86X24 394 aa18.55■□□□□ 0.56
SDCBP-204ENST00000447182 LACC1Q8IV20 430 aa18.55■□□□□ 0.56
SDCBP-204ENST00000447182 ZZZ3Q8IYH5 903 aa18.55■□□□□ 0.56
SDCBP-204ENST00000447182 HEPHQ9BQS7 1158 aa18.55■□□□□ 0.56
SDCBP-204ENST00000447182 DSN1Q9H410 356 aa18.55■□□□□ 0.56
SDCBP-204ENST00000447182 ELOVL6Q9H5J4 265 aa18.55■□□□□ 0.56
SDCBP-204ENST00000447182 KRT84Q9NSB2 600 aa18.55■□□□□ 0.56
SDCBP-204ENST00000447182 VPS51Q9UID3 782 aa18.55■□□□□ 0.56
SDCBP-204ENST00000447182 STOML2Q9UJZ1 356 aa18.55■□□□□ 0.56
SDCBP-204ENST00000447182 AGAP14A8MT82 685 aa18.54■□□□□ 0.56
SDCBP-204ENST00000447182 CLIC1O00299 241 aa18.54■□□□□ 0.56
SDCBP-204ENST00000447182 WBP4O75554 376 aaKnown RBP18.54■□□□□ 0.56
SDCBP-204ENST00000447182 SEC24AO95486 1093 aa18.54■□□□□ 0.56
SDCBP-204ENST00000447182 CHRNA6Q15825 494 aa18.54■□□□□ 0.56
SDCBP-204ENST00000447182 DUOXA1Q1HG43 343 aa18.54■□□□□ 0.56
SDCBP-204ENST00000447182 OR4F3Q6IEY1 312 aa18.54■□□□□ 0.56
SDCBP-204ENST00000447182 ZCCHC8Q6NZY4 707 aaKnown RBP18.54■□□□□ 0.56
SDCBP-204ENST00000447182 CBLL1Q75N03 491 aa18.54■□□□□ 0.56
SDCBP-204ENST00000447182 EIF3MQ7L2H7 374 aaKnown RBP18.54■□□□□ 0.56
SDCBP-204ENST00000447182 CCDC71Q8IV32 467 aaPredicted RBP18.54■□□□□ 0.56
SDCBP-204ENST00000447182 NXPE1Q8N323 547 aa18.54■□□□□ 0.56
SDCBP-204ENST00000447182 CBARPQ8N350 705 aaPredicted RBP18.54■□□□□ 0.56
SDCBP-204ENST00000447182 CPA6Q8N4T0 437 aa18.54■□□□□ 0.56
SDCBP-204ENST00000447182 L3MBTL4Q8NA19 623 aa18.54■□□□□ 0.56
SDCBP-204ENST00000447182 WBP2Q969T9 261 aa18.54■□□□□ 0.56
SDCBP-204ENST00000447182 SAMHD1Q9Y3Z3 626 aaKnown RBP18.54■□□□□ 0.56
SDCBP-204ENST00000447182 GPC6Q9Y625 555 aaPredicted RBP18.54■□□□□ 0.56
SDCBP-204ENST00000447182 HTR3EA5X5Y0 456 aa18.53■□□□□ 0.56
SDCBP-204ENST00000447182 EIF3FO00303 357 aaPredicted RBP18.53■□□□□ 0.56
SDCBP-204ENST00000447182 KDM1AO60341 852 aa18.53■□□□□ 0.56
SDCBP-204ENST00000447182 FKBP9O95302 570 aa18.53■□□□□ 0.56
SDCBP-204ENST00000447182 CLDN7O95471 211 aa18.53■□□□□ 0.56
SDCBP-204ENST00000447182 FUT4P22083 530 aa18.53■□□□□ 0.56
SDCBP-204ENST00000447182 EPHA2P29317 976 aa18.53■□□□□ 0.56
SDCBP-204ENST00000447182 PPP3CCP48454 512 aa18.53■□□□□ 0.56
SDCBP-204ENST00000447182 SLC11A1P49279 550 aa18.53■□□□□ 0.56
SDCBP-204ENST00000447182 ITGA1P56199 1179 aa18.53■□□□□ 0.56
SDCBP-204ENST00000447182 TUBA1BP68363 451 aa18.53■□□□□ 0.56
SDCBP-204ENST00000447182 DNASE1L3Q13609 305 aa18.53■□□□□ 0.56
SDCBP-204ENST00000447182 TUBA1AQ71U36 451 aa18.53■□□□□ 0.56
SDCBP-204ENST00000447182 TCAIMQ8N3R3 496 aa18.53■□□□□ 0.56
SDCBP-204ENST00000447182 FCRL1Q96LA6 429 aa18.53■□□□□ 0.56
SDCBP-204ENST00000447182 KLF16Q9BXK1 252 aaPredicted RBP18.53■□□□□ 0.56
SDCBP-204ENST00000447182 ARL15Q9NXU5 204 aa18.53■□□□□ 0.56
SDCBP-204ENST00000447182 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.53■□□□□ 0.56
SDCBP-204ENST00000447182 ISPDA4D126 451 aa18.53■□□□□ 0.56
SDCBP-204ENST00000447182 hCG_2039718K7EN88 272 aa18.53■□□□□ 0.56
SDCBP-204ENST00000447182 CD36P16671 472 aa18.53■□□□□ 0.56
SDCBP-204ENST00000447182 AMD1P17707 334 aa18.53■□□□□ 0.56
SDCBP-204ENST00000447182 PRPS1L1P21108 318 aa18.53■□□□□ 0.56
SDCBP-204ENST00000447182 UGT2B10P36537 528 aa18.53■□□□□ 0.56
SDCBP-204ENST00000447182 SPAM1P38567 509 aa18.53■□□□□ 0.56
SDCBP-204ENST00000447182 NSG1P42857 185 aa18.53■□□□□ 0.56
SDCBP-204ENST00000447182 TUFMP49411 452 aaKnown RBP18.53■□□□□ 0.56
SDCBP-204ENST00000447182 CDC20Q12834 499 aa18.53■□□□□ 0.56
SDCBP-204ENST00000447182 NPRL3Q12980 569 aa18.53■□□□□ 0.56
SDCBP-204ENST00000447182 PAGE2Q7Z2X7 111 aa18.53■□□□□ 0.56
SDCBP-204ENST00000447182 PLD3Q8IV08 490 aa18.53■□□□□ 0.56
SDCBP-204ENST00000447182 ADGRG2Q8IZP9 1017 aa18.53■□□□□ 0.56
SDCBP-204ENST00000447182 PCSK9Q8NBP7 692 aaKnown RBP18.53■□□□□ 0.56
SDCBP-204ENST00000447182 CSGALNACT1Q8TDX6 532 aa18.53■□□□□ 0.56
SDCBP-204ENST00000447182 FCGR1BQ92637 280 aa18.53■□□□□ 0.56
SDCBP-204ENST00000447182 APIPQ96GX9 242 aa18.53■□□□□ 0.56
SDCBP-204ENST00000447182 EGLN2Q96KS0 407 aa18.53■□□□□ 0.56
SDCBP-204ENST00000447182 SP140LQ9H930 580 aa18.53■□□□□ 0.56
SDCBP-204ENST00000447182 SCHIP1Q9P0W5 487 aaPredicted RBP18.53■□□□□ 0.56
SDCBP-204ENST00000447182 KIF17Q9P2E2 1029 aa18.53■□□□□ 0.56
SDCBP-204ENST00000447182 ANKMY1Q9P2S6 941 aa18.53■□□□□ 0.56
SDCBP-204ENST00000447182 PRMT3O60678 531 aa18.52■□□□□ 0.56
SDCBP-204ENST00000447182 TBL1XO60907 577 aa18.52■□□□□ 0.56
SDCBP-204ENST00000447182 DIRAS1O95057 198 aa18.52■□□□□ 0.56
SDCBP-204ENST00000447182 IRF1P10914 325 aa18.52■□□□□ 0.56
SDCBP-204ENST00000447182 HMGA1P17096 107 aaKnown RBP18.52■□□□□ 0.56
SDCBP-204ENST00000447182 ENGP17813 658 aa18.52■□□□□ 0.56
SDCBP-204ENST00000447182 HNF1BP35680 557 aa18.52■□□□□ 0.56
SDCBP-204ENST00000447182 EIF2DP41214 584 aaKnown RBP18.52■□□□□ 0.56
SDCBP-204ENST00000447182 NEK2P51955 445 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms