RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 TBPL1P62380 186 aa16.62■□□□□ 0.25
LIME1-202ENST00000444951 PRKAA1Q13131 559 aa16.62■□□□□ 0.25
LIME1-202ENST00000444951 GPS2Q13227 327 aa16.62■□□□□ 0.25
LIME1-202ENST00000444951 NR1D2Q14995 579 aa16.62■□□□□ 0.25
LIME1-202ENST00000444951 CYP2A13Q16696 494 aa16.62■□□□□ 0.25
LIME1-202ENST00000444951 KLHL35Q6PF15 583 aa16.62■□□□□ 0.25
LIME1-202ENST00000444951 PDPRQ8NCN5 879 aa16.62■□□□□ 0.25
LIME1-202ENST00000444951 SMPDL3AQ92484 453 aa16.62■□□□□ 0.25
LIME1-202ENST00000444951 TGM7Q96PF1 710 aa16.62■□□□□ 0.25
LIME1-202ENST00000444951 LRRN3Q9H3W5 708 aa16.62■□□□□ 0.25
LIME1-202ENST00000444951 CCDC177Q9NQR7 707 aaPredicted RBP16.62■□□□□ 0.25
LIME1-202ENST00000444951 ACSS2Q9NR19 701 aa16.62■□□□□ 0.25
LIME1-202ENST00000444951 OR6C2Q9NZP2 312 aa16.62■□□□□ 0.25
LIME1-202ENST00000444951 HELZ2Q9BYK8 2649 aaKnown RBP16.62■□□□□ 0.25
LIME1-202ENST00000444951 CFAP46Q8IYW2 2715 aa16.61■□□□□ 0.25
LIME1-202ENST00000444951 WDR91A4D1P6 747 aa16.61■□□□□ 0.25
LIME1-202ENST00000444951 A8MT66 165 aa16.61■□□□□ 0.25
LIME1-202ENST00000444951 TARM1B6A8C7 271 aa16.61■□□□□ 0.25
LIME1-202ENST00000444951 E7ENX8 843 aa16.61■□□□□ 0.25
LIME1-202ENST00000444951 G3V2L1 256 aa16.61■□□□□ 0.25
LIME1-202ENST00000444951 PRPF4O43172 522 aaKnown RBP eCLIP16.61■□□□□ 0.252e-8■■■□□ 15.5
LIME1-202ENST00000444951 WDR47O94967 919 aa16.61■□□□□ 0.25
LIME1-202ENST00000444951 ZWINTO95229 277 aa16.61■□□□□ 0.25
LIME1-202ENST00000444951 SIX3O95343 332 aaPredicted RBP16.61■□□□□ 0.25
LIME1-202ENST00000444951 ATP5F1P24539 256 aaPredicted RBP16.61■□□□□ 0.25
LIME1-202ENST00000444951 CAPZBP47756 277 aa16.61■□□□□ 0.25
LIME1-202ENST00000444951 HNMTP50135 292 aa16.61■□□□□ 0.25
LIME1-202ENST00000444951 GPLD1P80108 840 aa16.61■□□□□ 0.25
LIME1-202ENST00000444951 TAP2Q03519 686 aa16.61■□□□□ 0.25
LIME1-202ENST00000444951 ARHGAP19Q14CB8 494 aa16.61■□□□□ 0.25
LIME1-202ENST00000444951 ISXQ2M1V0 245 aa16.61■□□□□ 0.25
LIME1-202ENST00000444951 ZXDCQ2QGD7 858 aaPredicted RBP16.61■□□□□ 0.25
LIME1-202ENST00000444951 PTCHD3Q3KNS1 767 aa16.61■□□□□ 0.25
LIME1-202ENST00000444951 SNAP47Q5SQN1 464 aa16.61■□□□□ 0.25
LIME1-202ENST00000444951 PCSK4Q6UW60 755 aa16.61■□□□□ 0.25
LIME1-202ENST00000444951 ZYG11AQ6WRX3 759 aa16.61■□□□□ 0.25
LIME1-202ENST00000444951 FAM92BQ6ZTR7 304 aa16.61■□□□□ 0.25
LIME1-202ENST00000444951 TRIM73Q86UV7 250 aa16.61■□□□□ 0.25
LIME1-202ENST00000444951 FAM20CQ8IXL6 584 aa16.61■□□□□ 0.25
LIME1-202ENST00000444951 TCAIMQ8N3R3 496 aa16.61■□□□□ 0.25
LIME1-202ENST00000444951 SNX31Q8N9S9 440 aa16.61■□□□□ 0.25
LIME1-202ENST00000444951 PKNOX2Q96KN3 472 aa16.61■□□□□ 0.25
LIME1-202ENST00000444951 TMEM79Q9BSE2 394 aa16.61■□□□□ 0.25
LIME1-202ENST00000444951 CNOT10Q9H9A5 744 aaKnown RBP16.61■□□□□ 0.25
LIME1-202ENST00000444951 ASCL3Q9NQ33 180 aa16.61■□□□□ 0.25
LIME1-202ENST00000444951 NKIRAS1Q9NYS0 192 aa16.61■□□□□ 0.25
LIME1-202ENST00000444951 ACTR10Q9NZ32 417 aa16.61■□□□□ 0.25
LIME1-202ENST00000444951 TAC3Q9UHF0 121 aa16.61■□□□□ 0.25
LIME1-202ENST00000444951 PTBP2Q9UKA9 531 aaKnown RBP16.61■□□□□ 0.25
LIME1-202ENST00000444951 A0A1W2PQM1 296 aa16.6■□□□□ 0.25
LIME1-202ENST00000444951 EIF4E1BA6NMX2 242 aaKnown RBP16.6■□□□□ 0.25
LIME1-202ENST00000444951 C2orf74A8MZ97 194 aa16.6■□□□□ 0.25
LIME1-202ENST00000444951 H3BQF6 201 aa16.6■□□□□ 0.25
LIME1-202ENST00000444951 AGRPO00253 132 aa16.6■□□□□ 0.25
LIME1-202ENST00000444951 ATXN7O15265 892 aaPredicted RBP16.6■□□□□ 0.25
LIME1-202ENST00000444951 ERGP11308 486 aa16.6■□□□□ 0.25
LIME1-202ENST00000444951 UGT2B7P16662 529 aa16.6■□□□□ 0.25
LIME1-202ENST00000444951 EEF1DP29692 281 aaKnown RBP16.6■□□□□ 0.25
LIME1-202ENST00000444951 PEBP1P30086 187 aaKnown RBP16.6■□□□□ 0.25
LIME1-202ENST00000444951 CSF2RBP32927 897 aa16.6■□□□□ 0.25
LIME1-202ENST00000444951 LSSP48449 732 aa16.6■□□□□ 0.25
LIME1-202ENST00000444951 ALDH18A1P54886 795 aaKnown RBP16.6■□□□□ 0.25
LIME1-202ENST00000444951 GFERP55789 205 aa16.6■□□□□ 0.25
LIME1-202ENST00000444951 SETDB1Q15047 1291 aa16.6■□□□□ 0.25
LIME1-202ENST00000444951 SF1Q15637 639 aaKnown RBP16.6■□□□□ 0.25
LIME1-202ENST00000444951 CDKL4Q5MAI5 379 aa16.6■□□□□ 0.25
LIME1-202ENST00000444951 HHATQ5VTY9 493 aa16.6■□□□□ 0.25
LIME1-202ENST00000444951 CAPN13Q6MZZ7 669 aaPredicted RBP16.6■□□□□ 0.25
LIME1-202ENST00000444951 RDH11Q8TC12 318 aa16.6■□□□□ 0.25
LIME1-202ENST00000444951 SLC39A7Q92504 469 aa16.6■□□□□ 0.25
LIME1-202ENST00000444951 PRR11Q96HE9 360 aaPredicted RBP16.6■□□□□ 0.25
LIME1-202ENST00000444951 GFM1Q96RP9 751 aaKnown RBP16.6■□□□□ 0.25
LIME1-202ENST00000444951 MIPEPQ99797 713 aa16.6■□□□□ 0.25
LIME1-202ENST00000444951 NUDT22Q9BRQ3 303 aa16.6■□□□□ 0.25
LIME1-202ENST00000444951 MECRQ9BV79 373 aa16.6■□□□□ 0.25
LIME1-202ENST00000444951 CD244Q9BZW8 370 aa16.6■□□□□ 0.25
LIME1-202ENST00000444951 KLHL25Q9H0H3 589 aa16.6■□□□□ 0.25
LIME1-202ENST00000444951 POLR1BQ9H9Y6 1135 aa16.6■□□□□ 0.25
LIME1-202ENST00000444951 TMEM9Q9P0T7 183 aa16.6■□□□□ 0.25
LIME1-202ENST00000444951 COPG2Q9UBF2 871 aa16.6■□□□□ 0.25
LIME1-202ENST00000444951 MID2Q9UJV3 735 aa16.6■□□□□ 0.25
LIME1-202ENST00000444951 TMCO1Q9UM00 188 aa16.6■□□□□ 0.25
LIME1-202ENST00000444951 SATB2Q9UPW6 733 aa16.6■□□□□ 0.25
LIME1-202ENST00000444951 SLC22A14Q9Y267 594 aa16.6■□□□□ 0.25
LIME1-202ENST00000444951 ASB1Q9Y576 335 aa16.6■□□□□ 0.25
LIME1-202ENST00000444951 A0A1W2PPV9 198 aa16.59■□□□□ 0.25
LIME1-202ENST00000444951 TM9SF1O15321 606 aa16.59■□□□□ 0.25
LIME1-202ENST00000444951 CAPN5O15484 640 aaPredicted RBP16.59■□□□□ 0.25
LIME1-202ENST00000444951 KLK8O60259 260 aa16.59■□□□□ 0.25
LIME1-202ENST00000444951 STK16O75716 305 aa16.59■□□□□ 0.25
LIME1-202ENST00000444951 DXOO77932 396 aaKnown RBP16.59■□□□□ 0.25
LIME1-202ENST00000444951 OAS2P29728 719 aaKnown RBP16.59■□□□□ 0.25
LIME1-202ENST00000444951 PDX1P52945 283 aa16.59■□□□□ 0.25
LIME1-202ENST00000444951 PCBP4P57723 403 aaKnown RBP16.59■□□□□ 0.25
LIME1-202ENST00000444951 CXADRP78310 365 aa16.59■□□□□ 0.25
LIME1-202ENST00000444951 CFHR1Q03591 330 aa16.59■□□□□ 0.25
LIME1-202ENST00000444951 PCLAFQ15004 111 aa16.59■□□□□ 0.25
LIME1-202ENST00000444951 C3orf38Q5JPI3 329 aa16.59■□□□□ 0.25
LIME1-202ENST00000444951 PRAMEF13Q5VWM6 474 aa16.59■□□□□ 0.25
LIME1-202ENST00000444951 RPS27LQ71UM5 84 aaKnown RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms