RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 FAM53AQ6NSI3 398 aaPredicted RBP4.1□□□□□ -1.75
HMGB3P6-201ENST00000444896 ARHGAP22Q7Z5H3 698 aa4.1□□□□□ -1.75
HMGB3P6-201ENST00000444896 ZNF329Q86UD4 541 aa4.1□□□□□ -1.75
HMGB3P6-201ENST00000444896 FAM72BQ86X60 149 aa4.1□□□□□ -1.75
HMGB3P6-201ENST00000444896 BMPERQ8N8U9 685 aa4.1□□□□□ -1.75
HMGB3P6-201ENST00000444896 ZNF383Q8NA42 475 aa4.1□□□□□ -1.75
HMGB3P6-201ENST00000444896 THAP8Q8NA92 274 aa4.1□□□□□ -1.75
HMGB3P6-201ENST00000444896 CCDC107Q8WV48 283 aa4.1□□□□□ -1.75
HMGB3P6-201ENST00000444896 ZNF653Q96CK0 615 aa4.1□□□□□ -1.75
HMGB3P6-201ENST00000444896 FER1L6-AS2Q96M78 137 aa4.1□□□□□ -1.75
HMGB3P6-201ENST00000444896 RAD9AQ99638 391 aa4.1□□□□□ -1.75
HMGB3P6-201ENST00000444896 ECHDC1Q9NTX5 307 aa4.1□□□□□ -1.75
HMGB3P6-201ENST00000444896 TCF19Q9Y242 345 aa4.1□□□□□ -1.75
HMGB3P6-201ENST00000444896 CFAP65Q6ZU64 1925 aaKnown RBP4.1□□□□□ -1.75
HMGB3P6-201ENST00000444896 POLR3AO14802 1390 aaPredicted RBP4.1□□□□□ -1.75
HMGB3P6-201ENST00000444896 DIP2BQ9P265 1576 aa4.1□□□□□ -1.75
HMGB3P6-201ENST00000444896 A0A1W2PPK0 400 aa4.09□□□□□ -1.75
HMGB3P6-201ENST00000444896 ATP6V0E1O15342 81 aa4.09□□□□□ -1.75
HMGB3P6-201ENST00000444896 KRT86O43790 486 aa4.09□□□□□ -1.75
HMGB3P6-201ENST00000444896 APOA4P06727 396 aa4.09□□□□□ -1.75
HMGB3P6-201ENST00000444896 CSN3P07498 182 aa4.09□□□□□ -1.75
HMGB3P6-201ENST00000444896 CCDC175P0C221 793 aa4.09□□□□□ -1.75
HMGB3P6-201ENST00000444896 PATE4P0C8F1 98 aa4.09□□□□□ -1.75
HMGB3P6-201ENST00000444896 HAPLN1P10915 354 aaPredicted RBP4.09□□□□□ -1.75
HMGB3P6-201ENST00000444896 CEACAM8P31997 349 aaPredicted RBP4.09□□□□□ -1.75
HMGB3P6-201ENST00000444896 CCR10P46092 362 aa4.09□□□□□ -1.75
HMGB3P6-201ENST00000444896 LHX1P48742 406 aa4.09□□□□□ -1.75
HMGB3P6-201ENST00000444896 ASCL1P50553 236 aa4.09□□□□□ -1.75
HMGB3P6-201ENST00000444896 PDX1P52945 283 aa4.09□□□□□ -1.75
HMGB3P6-201ENST00000444896 PPIGQ13427 754 aaKnown RBP eCLIP4.09□□□□□ -1.75
HMGB3P6-201ENST00000444896 ITGA7Q13683 1181 aa4.09□□□□□ -1.75
HMGB3P6-201ENST00000444896 KRT81Q14533 505 aa4.09□□□□□ -1.75
HMGB3P6-201ENST00000444896 P2RY6Q15077 328 aa4.09□□□□□ -1.75
HMGB3P6-201ENST00000444896 KIAA1644Q3SXP7 199 aa4.09□□□□□ -1.75
HMGB3P6-201ENST00000444896 ISCA2Q86U28 154 aa4.09□□□□□ -1.75
HMGB3P6-201ENST00000444896 NUDT13Q86X67 352 aa4.09□□□□□ -1.75
HMGB3P6-201ENST00000444896 APLFQ8IW19 511 aaPredicted RBP4.09□□□□□ -1.75
HMGB3P6-201ENST00000444896 TTC30BQ8N4P2 665 aa4.09□□□□□ -1.75
HMGB3P6-201ENST00000444896 CAMKVQ8NCB2 501 aa4.09□□□□□ -1.75
HMGB3P6-201ENST00000444896 MRPS27Q92552 414 aaKnown RBP4.09□□□□□ -1.75
HMGB3P6-201ENST00000444896 MOB3AQ96BX8 217 aa4.09□□□□□ -1.75
HMGB3P6-201ENST00000444896 HES6Q96HZ4 224 aa4.09□□□□□ -1.75
HMGB3P6-201ENST00000444896 CFAP53Q96M91 514 aa4.09□□□□□ -1.75
HMGB3P6-201ENST00000444896 F2RL3Q96RI0 385 aa4.09□□□□□ -1.75
HMGB3P6-201ENST00000444896 ERVMER34-1Q9H9K5 563 aa4.09□□□□□ -1.75
HMGB3P6-201ENST00000444896 SLC52A3Q9NQ40 469 aa4.09□□□□□ -1.75
HMGB3P6-201ENST00000444896 STK26Q9P289 416 aa4.09□□□□□ -1.75
HMGB3P6-201ENST00000444896 TRIM17Q9Y577 477 aa4.09□□□□□ -1.75
HMGB3P6-201ENST00000444896 LIPGQ9Y5X9 500 aa4.09□□□□□ -1.75
HMGB3P6-201ENST00000444896 ANKRD36BQ8N2N9 1353 aa4.09□□□□□ -1.75
HMGB3P6-201ENST00000444896 YEATS2Q9ULM3 1422 aa4.09□□□□□ -1.75
HMGB3P6-201ENST00000444896 NKTRP30414 1462 aaKnown RBP4.09□□□□□ -1.75
HMGB3P6-201ENST00000444896 AGLP35573 1532 aa4.09□□□□□ -1.75
HMGB3P6-201ENST00000444896 RIMBP3CA6NJZ7 1639 aa4.09□□□□□ -1.76
HMGB3P6-201ENST00000444896 RIMBP3BA6NNM3 1639 aa4.09□□□□□ -1.76
HMGB3P6-201ENST00000444896 RIMBP3Q9UFD9 1639 aa4.09□□□□□ -1.76
HMGB3P6-201ENST00000444896 IGHV4-61A0A0C4DH41 118 aa4.08□□□□□ -1.76
HMGB3P6-201ENST00000444896 TMEM131LA2VDJ0 1609 aa4.08□□□□□ -1.76
HMGB3P6-201ENST00000444896 BLOC1S5-TXNDC5H3BN57 136 aa4.08□□□□□ -1.76
HMGB3P6-201ENST00000444896 TCERG1O14776 1098 aaKnown RBP4.08□□□□□ -1.76
HMGB3P6-201ENST00000444896 SOCS5O75159 536 aa4.08□□□□□ -1.76
HMGB3P6-201ENST00000444896 RECQL5O94762 991 aaPredicted RBP4.08□□□□□ -1.76
HMGB3P6-201ENST00000444896 ACSL3O95573 720 aa4.08□□□□□ -1.76
HMGB3P6-201ENST00000444896 CAVIN2O95810 425 aa4.08□□□□□ -1.76
HMGB3P6-201ENST00000444896 IGHV4-59P01825 116 aa4.08□□□□□ -1.76
HMGB3P6-201ENST00000444896 PRSS56P0CW18 603 aa4.08□□□□□ -1.76
HMGB3P6-201ENST00000444896 GLIPR1P48060 266 aa4.08□□□□□ -1.76
HMGB3P6-201ENST00000444896 TUBB4BP68371 445 aa4.08□□□□□ -1.76
HMGB3P6-201ENST00000444896 CLTCQ00610 1675 aaKnown RBP4.08□□□□□ -1.76
HMGB3P6-201ENST00000444896 TAF10Q12962 218 aa4.08□□□□□ -1.76
HMGB3P6-201ENST00000444896 VEZF1Q14119 521 aa4.08□□□□□ -1.76
HMGB3P6-201ENST00000444896 TNIP1Q15025 636 aa4.08□□□□□ -1.76
HMGB3P6-201ENST00000444896 UGP2Q16851 508 aa4.08□□□□□ -1.76
HMGB3P6-201ENST00000444896 HYAL4Q2M3T9 481 aa4.08□□□□□ -1.76
HMGB3P6-201ENST00000444896 CYP4A22Q5TCH4 519 aa4.08□□□□□ -1.76
HMGB3P6-201ENST00000444896 KRT39Q6A163 491 aa4.08□□□□□ -1.76
HMGB3P6-201ENST00000444896 C11orf63Q6NUN7 778 aa4.08□□□□□ -1.76
HMGB3P6-201ENST00000444896 DET1Q7L5Y6 550 aa4.08□□□□□ -1.76
HMGB3P6-201ENST00000444896 CCDC186Q7Z3E2 898 aa4.08□□□□□ -1.76
HMGB3P6-201ENST00000444896 ANKRD13CQ8N6S4 541 aa4.08□□□□□ -1.76
HMGB3P6-201ENST00000444896 EXOC6Q8TAG9 804 aa4.08□□□□□ -1.76
HMGB3P6-201ENST00000444896 PHLDA1Q8WV24 401 aaPredicted RBP4.08□□□□□ -1.76
HMGB3P6-201ENST00000444896 ROBO4Q8WZ75 1007 aa4.08□□□□□ -1.76
HMGB3P6-201ENST00000444896 TMEM143Q96AN5 459 aa4.08□□□□□ -1.76
HMGB3P6-201ENST00000444896 OTUB1Q96FW1 271 aaPredicted RBP4.08□□□□□ -1.76
HMGB3P6-201ENST00000444896 FAM20AQ96MK3 541 aa4.08□□□□□ -1.76
HMGB3P6-201ENST00000444896 ZNF558Q96NG5 402 aa4.08□□□□□ -1.76
HMGB3P6-201ENST00000444896 SLC25A23Q9BV35 468 aa4.08□□□□□ -1.76
HMGB3P6-201ENST00000444896 AP1M1Q9BXS5 423 aa4.08□□□□□ -1.76
HMGB3P6-201ENST00000444896 ZCCHC17Q9NP64 241 aaKnown RBP4.08□□□□□ -1.76
HMGB3P6-201ENST00000444896 TULP4Q9NRJ4 1543 aa4.08□□□□□ -1.76
HMGB3P6-201ENST00000444896 GKN1Q9NS71 199 aa4.08□□□□□ -1.76
HMGB3P6-201ENST00000444896 CACNG4Q9UBN1 327 aa4.08□□□□□ -1.76
HMGB3P6-201ENST00000444896 PLEKHH1Q9ULM0 1364 aa4.08□□□□□ -1.76
HMGB3P6-201ENST00000444896 KCNJ14Q9UNX9 436 aa4.08□□□□□ -1.76
HMGB3P6-201ENST00000444896 WDR83OSQ9Y284 106 aa4.08□□□□□ -1.76
HMGB3P6-201ENST00000444896 TMED3Q9Y3Q3 217 aa4.08□□□□□ -1.76
HMGB3P6-201ENST00000444896 SPATA31D1Q6ZQQ2 1576 aa4.07□□□□□ -1.76
HMGB3P6-201ENST00000444896 ANKRD61A6NGH8 418 aa4.07□□□□□ -1.76
HMGB3P6-201ENST00000444896 CLDN4O14493 209 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms