RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 OR9A1PQ8NGU1 263 aa13.46□□□□□ -0.25
TREX1-202ENST00000444177 MIPEPQ99797 713 aa13.46□□□□□ -0.25
TREX1-202ENST00000444177 DPH2Q9BQC3 489 aaPredicted RBP13.46□□□□□ -0.25
TREX1-202ENST00000444177 FAM129AQ9BZQ8 928 aa13.46□□□□□ -0.25
TREX1-202ENST00000444177 CHRNA10Q9GZZ6 450 aa13.46□□□□□ -0.25
TREX1-202ENST00000444177 SPRTNQ9H040 489 aaPredicted RBP13.46□□□□□ -0.25
TREX1-202ENST00000444177 MLXIPLQ9NP71 852 aa13.46□□□□□ -0.25
TREX1-202ENST00000444177 ACSS2Q9NR19 701 aa13.46□□□□□ -0.25
TREX1-202ENST00000444177 PLAAQ9Y263 795 aa13.46□□□□□ -0.25
TREX1-202ENST00000444177 SPTAN1Q13813 2472 aaKnown RBP13.46□□□□□ -0.26
TREX1-202ENST00000444177 E7ESA3 106 aa13.45□□□□□ -0.26
TREX1-202ENST00000444177 MYO1CO00159 1063 aa13.45□□□□□ -0.26
TREX1-202ENST00000444177 HCRTR1O43613 425 aa13.45□□□□□ -0.26
TREX1-202ENST00000444177 OR2B3O76000 313 aa13.45□□□□□ -0.26
TREX1-202ENST00000444177 AHSGP02765 367 aa13.45□□□□□ -0.26
TREX1-202ENST00000444177 GABRA4P48169 554 aa13.45□□□□□ -0.26
TREX1-202ENST00000444177 RGS4P49798 205 aa13.45□□□□□ -0.26
TREX1-202ENST00000444177 MLLT10P55197 1068 aa13.45□□□□□ -0.26
TREX1-202ENST00000444177 PDAP1Q13442 181 aaKnown RBP13.45□□□□□ -0.26
TREX1-202ENST00000444177 FASTKQ14296 549 aaKnown RBP13.45□□□□□ -0.26
TREX1-202ENST00000444177 FAM198BQ6UWH4 519 aa13.45□□□□□ -0.26
TREX1-202ENST00000444177 HMGCLL1Q8TB92 370 aa13.45□□□□□ -0.26
TREX1-202ENST00000444177 PKP4Q99569 1192 aa13.45□□□□□ -0.26
TREX1-202ENST00000444177 SLC25A23Q9BV35 468 aa13.45□□□□□ -0.26
TREX1-202ENST00000444177 PHACTR1Q9C0D0 580 aa13.45□□□□□ -0.26
TREX1-202ENST00000444177 TAS2R13Q9NYV9 303 aa13.45□□□□□ -0.26
TREX1-202ENST00000444177 ZFATQ9P243 1243 aa13.45□□□□□ -0.26
TREX1-202ENST00000444177 PCDHGA9Q9Y5G4 932 aaKnown RBP13.45□□□□□ -0.26
TREX1-202ENST00000444177 AP1M2Q9Y6Q5 423 aa13.45□□□□□ -0.26
TREX1-202ENST00000444177 ZNF839A8K0R7 811 aa13.44□□□□□ -0.26
TREX1-202ENST00000444177 H3BMH7 237 aa13.44□□□□□ -0.26
TREX1-202ENST00000444177 EIF3FO00303 357 aaPredicted RBP13.44□□□□□ -0.26
TREX1-202ENST00000444177 ZSCAN9O15535 394 aaPredicted RBP13.44□□□□□ -0.26
TREX1-202ENST00000444177 CTSBP07858 339 aa13.44□□□□□ -0.26
TREX1-202ENST00000444177 ATXN8OSP0DMR3 200 aa13.44□□□□□ -0.26
TREX1-202ENST00000444177 AGXTP21549 392 aa13.44□□□□□ -0.26
TREX1-202ENST00000444177 RPA3P35244 121 aaPredicted RBP13.44□□□□□ -0.26
TREX1-202ENST00000444177 PGDP52209 483 aa13.44□□□□□ -0.26
TREX1-202ENST00000444177 CDKN2DP55273 166 aa13.44□□□□□ -0.26
TREX1-202ENST00000444177 NCF4Q15080 339 aa13.44□□□□□ -0.26
TREX1-202ENST00000444177 CYP2A13Q16696 494 aa13.44□□□□□ -0.26
TREX1-202ENST00000444177 HECTD2Q5U5R9 776 aa13.44□□□□□ -0.26
TREX1-202ENST00000444177 ZNF385CQ66K41 422 aaPredicted RBP13.44□□□□□ -0.26
TREX1-202ENST00000444177 FCRL6Q6DN72 434 aa13.44□□□□□ -0.26
TREX1-202ENST00000444177 LRRC8EQ6NSJ5 796 aa13.44□□□□□ -0.26
TREX1-202ENST00000444177 FAM45BPQ6NSW5 357 aa13.44□□□□□ -0.26
TREX1-202ENST00000444177 FIGLAQ6QHK4 219 aa13.44□□□□□ -0.26
TREX1-202ENST00000444177 SUSD1Q6UWL2 747 aa13.44□□□□□ -0.26
TREX1-202ENST00000444177 UBE2R2Q712K3 238 aaPredicted RBP13.44□□□□□ -0.26
TREX1-202ENST00000444177 GALNT7Q86SF2 657 aa13.44□□□□□ -0.26
TREX1-202ENST00000444177 MYO1HQ8N1T3 1032 aa13.44□□□□□ -0.26
TREX1-202ENST00000444177 DNAJC22Q8N4W6 341 aa13.44□□□□□ -0.26
TREX1-202ENST00000444177 PPFIBP2Q8ND30 876 aa13.44□□□□□ -0.26
TREX1-202ENST00000444177 OR2L3Q8NG85 312 aa13.44□□□□□ -0.26
TREX1-202ENST00000444177 FAM45AQ8TCE6 357 aa13.44□□□□□ -0.26
TREX1-202ENST00000444177 MIB2Q96AX9 1013 aa13.44□□□□□ -0.26
TREX1-202ENST00000444177 LINGO1Q96FE5 620 aa13.44□□□□□ -0.26
TREX1-202ENST00000444177 LRRC1Q9BTT6 524 aa13.44□□□□□ -0.26
TREX1-202ENST00000444177 ACAT2Q9BWD1 397 aa13.44□□□□□ -0.26
TREX1-202ENST00000444177 SAYSD1Q9NPB0 183 aa13.44□□□□□ -0.26
TREX1-202ENST00000444177 ABCF3Q9NUQ8 709 aa13.44□□□□□ -0.26
TREX1-202ENST00000444177 EURLQ9NYK6 297 aa13.44□□□□□ -0.26
TREX1-202ENST00000444177 GRHL1Q9NZI5 618 aa13.44□□□□□ -0.26
TREX1-202ENST00000444177 CORO1CQ9ULV4 474 aaPredicted RBP13.44□□□□□ -0.26
TREX1-202ENST00000444177 PLCL2Q9UPR0 1127 aa13.44□□□□□ -0.26
TREX1-202ENST00000444177 SPTBN1Q01082 2364 aaKnown RBP13.44□□□□□ -0.26
TREX1-202ENST00000444177 A0A1W2PPV9 198 aa13.43□□□□□ -0.26
TREX1-202ENST00000444177 CYSRT1A8MQ03 144 aa13.43□□□□□ -0.26
TREX1-202ENST00000444177 C9J4A7 227 aa13.43□□□□□ -0.26
TREX1-202ENST00000444177 EIF3HO15372 352 aaKnown RBP eCLIP13.43□□□□□ -0.26
TREX1-202ENST00000444177 ZBTB14O43829 449 aa13.43□□□□□ -0.26
TREX1-202ENST00000444177 PRICKLE3O43900 615 aaPredicted RBP13.43□□□□□ -0.26
TREX1-202ENST00000444177 CEACAM4O75871 244 aa13.43□□□□□ -0.26
TREX1-202ENST00000444177 FKBP9O95302 570 aa13.43□□□□□ -0.26
TREX1-202ENST00000444177 SLC16A8O95907 504 aa13.43□□□□□ -0.26
TREX1-202ENST00000444177 ERGP11308 486 aa13.43□□□□□ -0.26
TREX1-202ENST00000444177 CMPK1P30085 196 aa13.43□□□□□ -0.26
TREX1-202ENST00000444177 GRIA3P42263 894 aa13.43□□□□□ -0.26
TREX1-202ENST00000444177 PNLIPRP1P54315 467 aa13.43□□□□□ -0.26
TREX1-202ENST00000444177 TIAL1Q01085 375 aaKnown RBP eCLIP13.43□□□□□ -0.26
TREX1-202ENST00000444177 MGAT5Q09328 741 aa13.43□□□□□ -0.26
TREX1-202ENST00000444177 UBAP2LQ14157 1087 aaKnown RBP13.43□□□□□ -0.26
TREX1-202ENST00000444177 FRG1Q14331 258 aaKnown RBP13.43□□□□□ -0.26
TREX1-202ENST00000444177 ZC3H12BQ5HYM0 836 aaKnown RBP13.43□□□□□ -0.26
TREX1-202ENST00000444177 C1orf189Q5VU69 101 aa13.43□□□□□ -0.26
TREX1-202ENST00000444177 MLIPQ5VWP3 458 aa13.43□□□□□ -0.26
TREX1-202ENST00000444177 RHBDD2Q6NTF9 364 aa13.43□□□□□ -0.26
TREX1-202ENST00000444177 PAQR3Q6TCH7 311 aa13.43□□□□□ -0.26
TREX1-202ENST00000444177 CYHR1Q6ZMK1 362 aa13.43□□□□□ -0.26
TREX1-202ENST00000444177 ZNF655Q8N720 491 aaPredicted RBP13.43□□□□□ -0.26
TREX1-202ENST00000444177 NOA1Q8NC60 698 aaKnown RBP13.43□□□□□ -0.26
TREX1-202ENST00000444177 OR2A1Q8NGT9 310 aa13.43□□□□□ -0.26
TREX1-202ENST00000444177 PYROXD1Q8WU10 500 aa13.43□□□□□ -0.26
TREX1-202ENST00000444177 EEF1AKMT1Q8WVE0 214 aa13.43□□□□□ -0.26
TREX1-202ENST00000444177 ASB11Q8WXH4 323 aa13.43□□□□□ -0.26
TREX1-202ENST00000444177 SMPDL3AQ92484 453 aa13.43□□□□□ -0.26
TREX1-202ENST00000444177 NDC1Q9BTX1 674 aa13.43□□□□□ -0.26
TREX1-202ENST00000444177 TXLNGQ9NUQ3 528 aa13.43□□□□□ -0.26
TREX1-202ENST00000444177 TAC3Q9UHF0 121 aa13.43□□□□□ -0.26
TREX1-202ENST00000444177 SRPK3Q9UPE1 567 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms