RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 ANKHQ9HCJ1 492 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 ZFP14Q9HCL3 533 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 PTPRHQ9HD43 1115 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 CASS4Q9NQ75 786 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 FBXO8Q9NRD0 319 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 SLC22A11Q9NSA0 550 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 ERVK13-1Q9NX77 482 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 NSMCE4AQ9NXX6 385 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 DNMT3BQ9UBC3 853 aaKnown RBP2.71□□□□□ -1.98
LIG4-203ENST00000442234 CTSFQ9UBX1 484 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 ZNF225Q9UK10 706 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 RPS6KA6Q9UK32 745 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 OAZ3Q9UMX2 235 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 ZFR2Q9UPR6 939 aaKnown RBP2.71□□□□□ -1.98
LIG4-203ENST00000442234 RUVBL1Q9Y265 456 aaKnown RBP2.71□□□□□ -1.98
LIG4-203ENST00000442234 FIS1Q9Y3D6 152 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 NAALAD2Q9Y3Q0 740 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 POLR3HQ9Y535 204 aaPredicted RBP2.71□□□□□ -1.98
LIG4-203ENST00000442234 TIMM13Q9Y5L4 95 aaPredicted RBP2.71□□□□□ -1.98
LIG4-203ENST00000442234 HSPE1-MOB4S4R3N1 261 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 NRCAMQ92823 1304 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 MYH3P11055 1940 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 WNK1Q9H4A3 2382 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 FAM240BA0A1B0GVZ2 78 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 SLC12A8A0AV02 714 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 DHRS12A0PJE2 317 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 LINC00862A6NCI5 91 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 TRABD2BA6NFA1 517 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 EFCAB10A6NFE3 127 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 CASTOR2A6NHX0 329 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 SMLR1H3BR10 107 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 H7C0S8 307 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 KCNK1O00180 336 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 PCDH17O14917 1159 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 NKRFO15226 690 aaKnown RBP eCLIP2.71□□□□□ -1.98
LIG4-203ENST00000442234 ATXN7O15265 892 aaPredicted RBP2.71□□□□□ -1.98
LIG4-203ENST00000442234 CAPN5O15484 640 aaPredicted RBP2.71□□□□□ -1.98
LIG4-203ENST00000442234 PAPSS1O43252 624 aaPredicted RBP2.71□□□□□ -1.98
LIG4-203ENST00000442234 HS6ST1O60243 411 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 FAM189A1O60320 539 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 EIF1BO60739 113 aaKnown RBP2.71□□□□□ -1.98
LIG4-203ENST00000442234 SEC14L2O76054 403 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 CDK14O94921 469 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 LDLRP01130 860 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 EPOP01588 193 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 CHRNA1P02708 482 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 CYBBP04839 570 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 TRAPPC2P0DI81 140 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 TRAPPC2BP0DI82 140 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 FCGR1AP12314 374 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 CKMT1AP12532 417 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 HNRNPLP14866 589 aaKnown RBP eCLIP2.71□□□□□ -1.98
LIG4-203ENST00000442234 EPCAMP16422 314 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 HTR1BP28222 390 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 GABRB3P28472 473 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 GCAP28676 217 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 SLC7A1P30825 629 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 UGT2B10P36537 528 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 EIF1P41567 113 aaKnown RBP2.71□□□□□ -1.98
LIG4-203ENST00000442234 CASP2P42575 452 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 CYP2J2P51589 502 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 GMFBP60983 142 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 SPCS3P61009 180 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 RAB2AP61019 212 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 RAB5BP61020 215 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 PSME3P61289 254 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 SMAD3P84022 425 aaKnown RBP2.71□□□□□ -1.98
LIG4-203ENST00000442234 MS4A2Q01362 244 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 ZNF91Q05481 1191 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 C2orf80Q0P641 193 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 CDH17Q12864 832 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 GPR17Q13304 367 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 BMPR2Q13873 1038 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 SF3A2Q15428 464 aaKnown RBP2.71□□□□□ -1.98
LIG4-203ENST00000442234 C2orf27AQ580R0 203 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 XKR9Q5GH70 373 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 PPM1JQ5JR12 505 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 TRIQKQ629K1 86 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 ARHGAP17Q68EM7 881 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 FAM45BPQ6NSW5 357 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 C11orf63Q6NUN7 778 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 PMF1Q6P1K2 205 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 CLEC2AQ6UVW9 174 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 PAMR1Q6UXH9 720 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 RANBP10Q6VN20 620 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 ZNF782Q6ZMW2 699 aaPredicted RBP2.71□□□□□ -1.98
LIG4-203ENST00000442234 MRPL10Q7Z7H8 261 aaKnown RBP2.71□□□□□ -1.98
LIG4-203ENST00000442234 TRIM69Q86WT6 500 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 ADGRG3Q86Y34 549 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 SPAG16Q8N0X2 631 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 PACRGLQ8N7B6 248 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 TMEM102Q8N9M5 508 aaPredicted RBP2.71□□□□□ -1.98
LIG4-203ENST00000442234 ZNF248Q8NDW4 579 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 GLIS3Q8NEA6 775 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 CMASQ8NFW8 434 aaPredicted RBP2.71□□□□□ -1.98
LIG4-203ENST00000442234 POC1BQ8TC44 478 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 RNF139Q8WU17 664 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 PHF10Q8WUB8 498 aaKnown RBP2.71□□□□□ -1.98
LIG4-203ENST00000442234 SFT2D1Q8WV19 159 aa2.71□□□□□ -1.98
LIG4-203ENST00000442234 RLN3Q8WXF3 142 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms