RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 PPP1R3AQ16821 1122 aa7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 PCID2Q5JVF3 399 aa7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 KIAA0930Q6ICG6 404 aaPredicted RBP7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 C16orf89Q6UX73 402 aa7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 ANKFN1Q8N957 763 aa7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 ZCCHC14Q8WYQ9 949 aaKnown RBP7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 CCDC124Q96CT7 223 aaKnown RBP7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 ALG14Q96F25 216 aa7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 DNAJC1Q96KC8 554 aaKnown RBP7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 C3orf30Q96M34 536 aa7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 TRIM39Q9HCM9 518 aa7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 CPSF2Q9P2I0 782 aaKnown RBP7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 XPR1Q9UBH6 696 aa7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 OR51B4Q9Y5P0 310 aa7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 ARL5AQ9Y689 179 aa7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 SPTY2D1-AS1A0A0U1RR47 76 aa7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 TCRBV5S2A0A599 114 aa7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 A8MT66 165 aa7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 PROB1E7EW31 1015 aa7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 RAD51BO15315 384 aa7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 KLK10O43240 276 aa7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 LILRB5O75023 590 aa7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 CSO75390 466 aaKnown RBP7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 GJB3O75712 270 aa7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 CATP04040 527 aaKnown RBP7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 CCNYL3P0C7X3 344 aa7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 MTHFD2P13995 350 aa7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 NCF2P19878 526 aaPredicted RBP7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 IGFALSP35858 605 aa7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 MMP12P39900 470 aa7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 CTSKP43235 329 aa7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 NUDT2P50583 147 aa7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 SF1Q15637 639 aaKnown RBP7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 SIRPB2Q5JXA9 342 aa7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 RBM20Q5T481 1227 aaKnown RBP7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 C6orf52Q5T4I8 152 aa7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 AFTPHQ6ULP2 937 aa7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 BNC2Q6ZN30 1099 aaPredicted RBP7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 SERPINA9Q86WD7 417 aa7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 PLXDC1Q8IUK5 500 aa7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 C2orf73Q8N5S3 287 aaPredicted RBP7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 ZNF548Q8NEK5 533 aaPredicted RBP7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 BHLHE22Q8NFJ8 381 aaPredicted RBP7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 OR13C4Q8NGS5 318 aa7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 PPP1R14CQ8TAE6 165 aa7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 CLIP3Q96DZ5 547 aa7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 PDXPQ96GD0 296 aa7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 NPAS2Q99743 824 aa7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 ACAT2Q9BWD1 397 aa7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 ANKRD60Q9BZ19 345 aa7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 TAAR2Q9P1P5 351 aa7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 HEMK1Q9Y5R4 338 aaPredicted RBP7.18□□□□□ -1.26
CDC42BPA-208ENST00000442054 TRABD2BA6NFA1 517 aa7.17□□□□□ -1.26
CDC42BPA-208ENST00000442054 POLR1CO15160 346 aaPredicted RBP7.17□□□□□ -1.26
CDC42BPA-208ENST00000442054 BMP2P12643 396 aa7.17□□□□□ -1.26
CDC42BPA-208ENST00000442054 GRK3P35626 688 aa7.17□□□□□ -1.26
CDC42BPA-208ENST00000442054 TTPAP49638 278 aa7.17□□□□□ -1.26
CDC42BPA-208ENST00000442054 TARDBPQ13148 414 aaKnown RBP eCLIP7.17□□□□□ -1.26
CDC42BPA-208ENST00000442054 TRIM25Q14258 630 aaKnown RBP7.17□□□□□ -1.26
CDC42BPA-208ENST00000442054 TAF1AQ15573 450 aaPredicted RBP7.17□□□□□ -1.26
CDC42BPA-208ENST00000442054 MMEL1Q495T6 779 aa7.17□□□□□ -1.26
CDC42BPA-208ENST00000442054 TMEM52BQ4KMG9 183 aa7.17□□□□□ -1.26
CDC42BPA-208ENST00000442054 GPRC6AQ5T6X5 926 aa7.17□□□□□ -1.26
CDC42BPA-208ENST00000442054 UGT3A1Q6NUS8 523 aa7.17□□□□□ -1.26
CDC42BPA-208ENST00000442054 ZNF549Q6P9A3 640 aa7.17□□□□□ -1.26
CDC42BPA-208ENST00000442054 SPATA24Q86W54 205 aa7.17□□□□□ -1.26
CDC42BPA-208ENST00000442054 SIDT2Q8NBJ9 832 aaKnown RBP7.17□□□□□ -1.26
CDC42BPA-208ENST00000442054 AGBL5Q8NDL9 886 aa7.17□□□□□ -1.26
CDC42BPA-208ENST00000442054 OR1E3Q8WZA6 343 aa7.17□□□□□ -1.26
CDC42BPA-208ENST00000442054 ZDHHC12Q96GR4 267 aa7.17□□□□□ -1.26
CDC42BPA-208ENST00000442054 MARK4Q96L34 752 aa7.17□□□□□ -1.26
CDC42BPA-208ENST00000442054 CATSPER2Q96P56 530 aa7.17□□□□□ -1.26
CDC42BPA-208ENST00000442054 TUBB1Q9H4B7 451 aa7.17□□□□□ -1.26
CDC42BPA-208ENST00000442054 MAGEE1Q9HCI5 957 aa7.17□□□□□ -1.26
CDC42BPA-208ENST00000442054 FGF22Q9HCT0 170 aa7.17□□□□□ -1.26
CDC42BPA-208ENST00000442054 HRASLS2Q9NWW9 162 aa7.17□□□□□ -1.26
CDC42BPA-208ENST00000442054 NSMCE4AQ9NXX6 385 aa7.17□□□□□ -1.26
CDC42BPA-208ENST00000442054 TRPM6Q9BX84 2022 aa7.17□□□□□ -1.26
CDC42BPA-208ENST00000442054 OBSL1O75147 1896 aa7.17□□□□□ -1.26
CDC42BPA-208ENST00000442054 A0A1B0GTL3 188 aa7.17□□□□□ -1.26
CDC42BPA-208ENST00000442054 FAM221BA6H8Z2 402 aa7.17□□□□□ -1.26
CDC42BPA-208ENST00000442054 TMEM202A6NGA9 273 aa7.17□□□□□ -1.26
CDC42BPA-208ENST00000442054 H3BNH8 94 aa7.17□□□□□ -1.26
CDC42BPA-208ENST00000442054 TRIM38O00635 465 aa7.17□□□□□ -1.26
CDC42BPA-208ENST00000442054 TOR1BO14657 336 aa7.17□□□□□ -1.26
CDC42BPA-208ENST00000442054 PGM3O95394 542 aa7.17□□□□□ -1.26
CDC42BPA-208ENST00000442054 HSPA4LO95757 839 aa7.17□□□□□ -1.26
CDC42BPA-208ENST00000442054 IGHV4-34P06331 123 aa7.17□□□□□ -1.26
CDC42BPA-208ENST00000442054 INHBBP09529 407 aa7.17□□□□□ -1.26
CDC42BPA-208ENST00000442054 PKNOX1P55347 436 aa7.17□□□□□ -1.26
CDC42BPA-208ENST00000442054 CACHD1Q5VU97 1274 aa7.17□□□□□ -1.26
CDC42BPA-208ENST00000442054 GK5Q6ZS86 529 aa7.17□□□□□ -1.26
CDC42BPA-208ENST00000442054 RAB11FIP2Q7L804 512 aa7.17□□□□□ -1.26
CDC42BPA-208ENST00000442054 FAM156AQ8NDB6 213 aa7.17□□□□□ -1.26
CDC42BPA-208ENST00000442054 PAPD5Q8NDF8 572 aaKnown RBP7.17□□□□□ -1.26
CDC42BPA-208ENST00000442054 OR4E2Q8NGC2 313 aa7.17□□□□□ -1.26
CDC42BPA-208ENST00000442054 OR4L1Q8NH43 312 aa7.17□□□□□ -1.26
CDC42BPA-208ENST00000442054 WDR36Q8NI36 951 aaKnown RBP7.17□□□□□ -1.26
CDC42BPA-208ENST00000442054 SNIP1Q8TAD8 396 aaKnown RBP7.17□□□□□ -1.26
CDC42BPA-208ENST00000442054 ASZ1Q8WWH4 475 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms