RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 HS6ST3Q8IZP7 471 aa8.82□□□□□ -1
COPB1-202ENST00000439561 IPCEF1Q8WWN9 437 aaPredicted RBP8.82□□□□□ -1
COPB1-202ENST00000439561 TMEM203Q969S6 136 aa8.82□□□□□ -1
COPB1-202ENST00000439561 TXNDC15Q96J42 360 aa8.82□□□□□ -1
COPB1-202ENST00000439561 GFM1Q96RP9 751 aaKnown RBP8.82□□□□□ -1
COPB1-202ENST00000439561 ADAM2Q99965 735 aa8.82□□□□□ -1
COPB1-202ENST00000439561 MMP28Q9H239 520 aa8.82□□□□□ -1
COPB1-202ENST00000439561 FBXO44Q9H4M3 255 aa8.82□□□□□ -1
COPB1-202ENST00000439561 ACTL8Q9H568 366 aa8.82□□□□□ -1
COPB1-202ENST00000439561 POPDC3Q9HBV1 291 aa8.82□□□□□ -1
COPB1-202ENST00000439561 TM9SF3Q9HD45 589 aa8.82□□□□□ -1
COPB1-202ENST00000439561 HEBP1Q9NRV9 189 aa8.82□□□□□ -1
COPB1-202ENST00000439561 OSER1Q9NX31 292 aa8.82□□□□□ -1
COPB1-202ENST00000439561 KCNH4Q9UQ05 1017 aa8.82□□□□□ -1
COPB1-202ENST00000439561 TLR6Q9Y2C9 796 aa8.82□□□□□ -1
COPB1-202ENST00000439561 N6AMT1Q9Y5N5 214 aa8.82□□□□□ -1
COPB1-202ENST00000439561 RGPD3A6NKT7 1758 aaPredicted RBP8.82□□□□□ -1
COPB1-202ENST00000439561 RGPD4Q7Z3J3 1758 aa8.82□□□□□ -1
COPB1-202ENST00000439561 ZNF638Q14966 1978 aaKnown RBP8.81□□□□□ -1
COPB1-202ENST00000439561 AP3D1O14617 1153 aa8.81□□□□□ -1
COPB1-202ENST00000439561 PCDHGA12O60330 932 aa8.81□□□□□ -1
COPB1-202ENST00000439561 CCNDBP1O95273 360 aa8.81□□□□□ -1
COPB1-202ENST00000439561 PRAMEF1O95521 474 aa8.81□□□□□ -1
COPB1-202ENST00000439561 PTTG1O95997 202 aa8.81□□□□□ -1
COPB1-202ENST00000439561 CDKN2CP42773 168 aa8.81□□□□□ -1
COPB1-202ENST00000439561 RAB25P57735 213 aa8.81□□□□□ -1
COPB1-202ENST00000439561 CYP4F8P98187 520 aa8.81□□□□□ -1
COPB1-202ENST00000439561 GANABQ14697 944 aaKnown RBP8.81□□□□□ -1
COPB1-202ENST00000439561 TAF1AQ15573 450 aaPredicted RBP8.81□□□□□ -1
COPB1-202ENST00000439561 PARP15Q460N3 678 aa8.81□□□□□ -1
COPB1-202ENST00000439561 CTXN3Q4LDR2 81 aa8.81□□□□□ -1
COPB1-202ENST00000439561 PYDC2Q56P42 97 aa8.81□□□□□ -1
COPB1-202ENST00000439561 PRSS36Q5K4E3 855 aa8.81□□□□□ -1
COPB1-202ENST00000439561 VARS2Q5ST30 1063 aaKnown RBP8.81□□□□□ -1
COPB1-202ENST00000439561 ATAD3CQ5T2N8 411 aa8.81□□□□□ -1
COPB1-202ENST00000439561 SYT6Q5T7P8 510 aaPredicted RBP8.81□□□□□ -1
COPB1-202ENST00000439561 SUSD1Q6UWL2 747 aa8.81□□□□□ -1
COPB1-202ENST00000439561 CXCL17Q6UXB2 119 aa8.81□□□□□ -1
COPB1-202ENST00000439561 EIF3MQ7L2H7 374 aaKnown RBP8.81□□□□□ -1
COPB1-202ENST00000439561 GDPD3Q7L5L3 318 aa8.81□□□□□ -1
COPB1-202ENST00000439561 GPR65Q8IYL9 337 aa8.81□□□□□ -1
COPB1-202ENST00000439561 GLB1L3Q8NCI6 653 aaPredicted RBP8.81□□□□□ -1
COPB1-202ENST00000439561 MDGA1Q8NFP4 955 aa8.81□□□□□ -1
COPB1-202ENST00000439561 MAL2Q969L2 176 aa8.81□□□□□ -1
COPB1-202ENST00000439561 SLC30A2Q9BRI3 323 aa8.81□□□□□ -1
COPB1-202ENST00000439561 EMILIN2Q9BXX0 1053 aa8.81□□□□□ -1
COPB1-202ENST00000439561 NLE1Q9NVX2 485 aaPredicted RBP8.81□□□□□ -1
COPB1-202ENST00000439561 TMEFF2Q9UIK5 374 aaPredicted RBP8.81□□□□□ -1
COPB1-202ENST00000439561 PPP2R3BQ9Y5P8 575 aa8.81□□□□□ -1
COPB1-202ENST00000439561 OR6C70A6NIJ9 312 aa8.81□□□□□ -1
COPB1-202ENST00000439561 ARNTLO00327 626 aa8.81□□□□□ -1
COPB1-202ENST00000439561 CKMT1AP12532 417 aa8.81□□□□□ -1
COPB1-202ENST00000439561 ITGALP20701 1170 aa8.81□□□□□ -1
COPB1-202ENST00000439561 HTR7P34969 479 aa8.81□□□□□ -1
COPB1-202ENST00000439561 CA5AP35218 305 aa8.81□□□□□ -1
COPB1-202ENST00000439561 ZNF45Q02386 682 aa8.81□□□□□ -1
COPB1-202ENST00000439561 ABHD18Q0P651 414 aa8.81□□□□□ -1
COPB1-202ENST00000439561 SF1Q15637 639 aaKnown RBP8.81□□□□□ -1
COPB1-202ENST00000439561 UAP1L1Q3KQV9 507 aa8.81□□□□□ -1
COPB1-202ENST00000439561 RUNDC3AQ59EK9 446 aa8.81□□□□□ -1
COPB1-202ENST00000439561 AGAP6Q5VW22 663 aa8.81□□□□□ -1
COPB1-202ENST00000439561 LAIR2Q6ISS4 152 aa8.81□□□□□ -1
COPB1-202ENST00000439561 RGMBQ6NW40 437 aa8.81□□□□□ -1
COPB1-202ENST00000439561 SYCE2Q6PIF2 218 aa8.81□□□□□ -1
COPB1-202ENST00000439561 NEK10Q6ZWH5 1172 aa8.81□□□□□ -1
COPB1-202ENST00000439561 BHLHA9Q7RTU4 235 aa8.81□□□□□ -1
COPB1-202ENST00000439561 GPR142Q7Z601 462 aa8.81□□□□□ -1
COPB1-202ENST00000439561 GPR149Q86SP6 731 aa8.81□□□□□ -1
COPB1-202ENST00000439561 SERPINA9Q86WD7 417 aa8.81□□□□□ -1
COPB1-202ENST00000439561 RNF175Q8N4F7 328 aa8.81□□□□□ -1
COPB1-202ENST00000439561 CARNMT1Q8N4J0 409 aa8.81□□□□□ -1
COPB1-202ENST00000439561 VANGL1Q8TAA9 524 aaPredicted RBP8.81□□□□□ -1
COPB1-202ENST00000439561 YIPF6Q96EC8 236 aa8.81□□□□□ -1
COPB1-202ENST00000439561 NECTIN4Q96NY8 510 aa8.81□□□□□ -1
COPB1-202ENST00000439561 AGAP4Q96P64 663 aa8.81□□□□□ -1
COPB1-202ENST00000439561 MTERF1Q99551 399 aaKnown RBP8.81□□□□□ -1
COPB1-202ENST00000439561 FEVQ99581 238 aa8.81□□□□□ -1
COPB1-202ENST00000439561 BOCQ9BWV1 1114 aa8.81□□□□□ -1
COPB1-202ENST00000439561 PLSCR3Q9NRY6 295 aa8.81□□□□□ -1
COPB1-202ENST00000439561 TOR4AQ9NXH8 423 aa8.81□□□□□ -1
COPB1-202ENST00000439561 CRNNQ9UBG3 495 aaPredicted RBP8.81□□□□□ -1
COPB1-202ENST00000439561 SPASTQ9UBP0 616 aa8.81□□□□□ -1
COPB1-202ENST00000439561 FBXO10Q9UK96 956 aa8.81□□□□□ -1
COPB1-202ENST00000439561 DLGAP4Q9Y2H0 992 aa8.81□□□□□ -1
COPB1-202ENST00000439561 LOC285095A0A1B0GVY8 99 aa8.81□□□□□ -1
COPB1-202ENST00000439561 MANBAO00462 879 aa8.81□□□□□ -1
COPB1-202ENST00000439561 HAT1O14929 419 aa8.81□□□□□ -1
COPB1-202ENST00000439561 CLDN9O95484 217 aa8.81□□□□□ -1
COPB1-202ENST00000439561 ESR1P03372 595 aa8.81□□□□□ -1
COPB1-202ENST00000439561 ANXA5P08758 320 aa8.81□□□□□ -1
COPB1-202ENST00000439561 TSPAN19P0C672 248 aa8.81□□□□□ -1
COPB1-202ENST00000439561 TACR2P21452 398 aa8.81□□□□□ -1
COPB1-202ENST00000439561 DGKAP23743 735 aa8.81□□□□□ -1
COPB1-202ENST00000439561 TACR1P25103 407 aa8.81□□□□□ -1
COPB1-202ENST00000439561 HNF4AP41235 474 aa8.81□□□□□ -1
COPB1-202ENST00000439561 TIAL1Q01085 375 aaKnown RBP eCLIP8.81□□□□□ -13e-6■■■■□ 21.9
COPB1-202ENST00000439561 KCNC4Q03721 635 aa8.81□□□□□ -1
COPB1-202ENST00000439561 SMU1Q2TAY7 513 aa8.81□□□□□ -1
COPB1-202ENST00000439561 TIMM50Q3ZCQ8 353 aa8.81□□□□□ -1
COPB1-202ENST00000439561 ATXN7L2Q5T6C5 722 aaPredicted RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms