RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 GNG2P59768 71 aa13.03□□□□□ -0.32
ACTN1-204ENST00000438964 CTSL3PQ5NE16 218 aa13.03□□□□□ -0.32
ACTN1-204ENST00000438964 ARTNQ5T4W7 220 aa13.03□□□□□ -0.32
ACTN1-204ENST00000438964 KDM4DQ6B0I6 523 aa13.03□□□□□ -0.32
ACTN1-204ENST00000438964 OR4F3Q6IEY1 312 aa13.03□□□□□ -0.32
ACTN1-204ENST00000438964 KLHDC8BQ8IXV7 354 aa13.03□□□□□ -0.32
ACTN1-204ENST00000438964 LPCAT1Q8NF37 534 aa13.03□□□□□ -0.32
ACTN1-204ENST00000438964 OR10T2Q8NGX3 314 aa13.03□□□□□ -0.32
ACTN1-204ENST00000438964 SNAPC3Q92966 411 aa13.03□□□□□ -0.32
ACTN1-204ENST00000438964 COQ8BQ96D53 544 aa13.03□□□□□ -0.32
ACTN1-204ENST00000438964 HSH2DQ96JZ2 352 aa13.03□□□□□ -0.32
ACTN1-204ENST00000438964 RPRD1AQ96P16 312 aaPredicted RBP13.03□□□□□ -0.32
ACTN1-204ENST00000438964 RTP3Q9BQQ7 232 aa13.03□□□□□ -0.32
ACTN1-204ENST00000438964 HEBP1Q9NRV9 189 aa13.03□□□□□ -0.32
ACTN1-204ENST00000438964 SNTG1Q9NSN8 517 aa13.03□□□□□ -0.32
ACTN1-204ENST00000438964 PCDHGA6Q9Y5G7 932 aa13.03□□□□□ -0.32
ACTN1-204ENST00000438964 CLDN24A6NM45 220 aa13.02□□□□□ -0.32
ACTN1-204ENST00000438964 SCELO95171 688 aa13.02□□□□□ -0.32
ACTN1-204ENST00000438964 ADORA3P0DMS8 318 aa13.02□□□□□ -0.32
ACTN1-204ENST00000438964 ZNF280AP59817 542 aaPredicted RBP13.02□□□□□ -0.32
ACTN1-204ENST00000438964 ST3GAL4Q11206 333 aa13.02□□□□□ -0.32
ACTN1-204ENST00000438964 TTC23LQ6PF05 361 aa13.02□□□□□ -0.32
ACTN1-204ENST00000438964 ANGPTL8Q6UXH0 198 aa13.02□□□□□ -0.32
ACTN1-204ENST00000438964 SCD5Q86SK9 330 aa13.02□□□□□ -0.32
ACTN1-204ENST00000438964 CAMKK1Q8N5S9 505 aa13.02□□□□□ -0.32
ACTN1-204ENST00000438964 CD200R1Q8TD46 325 aa13.02□□□□□ -0.32
ACTN1-204ENST00000438964 ZNF566Q969W8 418 aa13.02□□□□□ -0.32
ACTN1-204ENST00000438964 CCM2Q9BSQ5 444 aa13.02□□□□□ -0.32
ACTN1-204ENST00000438964 NUSAP1Q9BXS6 441 aaKnown RBP13.02□□□□□ -0.32
ACTN1-204ENST00000438964 NDRG4Q9ULP0 352 aaKnown RBP13.02□□□□□ -0.32
ACTN1-204ENST00000438964 TRAV19A0A0A6YYK7 116 aa13.02□□□□□ -0.33
ACTN1-204ENST00000438964 A0A1W2PQ09 198 aa13.02□□□□□ -0.33
ACTN1-204ENST00000438964 ARNTLO00327 626 aa13.02□□□□□ -0.33
ACTN1-204ENST00000438964 ITGAMP11215 1152 aa13.02□□□□□ -0.33
ACTN1-204ENST00000438964 POU1F1P28069 291 aa13.02□□□□□ -0.33
ACTN1-204ENST00000438964 MC4RP32245 332 aa13.02□□□□□ -0.33
ACTN1-204ENST00000438964 GPR162Q16538 588 aa13.02□□□□□ -0.33
ACTN1-204ENST00000438964 SNX20Q7Z614 316 aa13.02□□□□□ -0.33
ACTN1-204ENST00000438964 KLHDC9Q8NEP7 349 aa13.02□□□□□ -0.33
ACTN1-204ENST00000438964 HCAR2Q8TDS4 363 aa13.02□□□□□ -0.33
ACTN1-204ENST00000438964 CCDC120Q96HB5 630 aa13.02□□□□□ -0.33
ACTN1-204ENST00000438964 KATNAL1Q9BW62 490 aa13.02□□□□□ -0.33
ACTN1-204ENST00000438964 FAM124BQ9H5Z6 455 aaPredicted RBP13.02□□□□□ -0.33
ACTN1-204ENST00000438964 ABCB9Q9NP78 766 aa13.02□□□□□ -0.33
ACTN1-204ENST00000438964 ABCB8Q9NUT2 735 aa13.02□□□□□ -0.33
ACTN1-204ENST00000438964 ELOVL2Q9NXB9 296 aa13.02□□□□□ -0.33
ACTN1-204ENST00000438964 ABI2Q9NYB9 513 aaPredicted RBP13.02□□□□□ -0.33
ACTN1-204ENST00000438964 VPS26AO75436 327 aa13.02□□□□□ -0.33
ACTN1-204ENST00000438964 SERPINF2P08697 491 aa13.02□□□□□ -0.33
ACTN1-204ENST00000438964 ACPPP15309 386 aa13.02□□□□□ -0.33
ACTN1-204ENST00000438964 SMPD1P17405 629 aa13.02□□□□□ -0.33
ACTN1-204ENST00000438964 OR1E1P30953 314 aa13.02□□□□□ -0.33
ACTN1-204ENST00000438964 ZNF135P52742 658 aaPredicted RBP13.02□□□□□ -0.33
ACTN1-204ENST00000438964 CACHD1Q5VU97 1274 aa13.02□□□□□ -0.33
ACTN1-204ENST00000438964 NADSYN1Q6IA69 706 aa13.02□□□□□ -0.33
ACTN1-204ENST00000438964 ZNF621Q6ZSS3 439 aa13.02□□□□□ -0.33
ACTN1-204ENST00000438964 KIAA1958Q8N8K9 716 aa13.02□□□□□ -0.33
ACTN1-204ENST00000438964 FBLIM1Q8WUP2 373 aa13.02□□□□□ -0.33
ACTN1-204ENST00000438964 CCDC115Q96NT0 180 aa13.02□□□□□ -0.33
ACTN1-204ENST00000438964 ZNF717Q9BY31 904 aaPredicted RBP13.02□□□□□ -0.33
ACTN1-204ENST00000438964 HAS3O00219 553 aa13.01□□□□□ -0.33
ACTN1-204ENST00000438964 FGF10O15520 208 aaPredicted RBP13.01□□□□□ -0.33
ACTN1-204ENST00000438964 DNAJB5O75953 348 aa13.01□□□□□ -0.33
ACTN1-204ENST00000438964 FABP3P05413 133 aa13.01□□□□□ -0.33
ACTN1-204ENST00000438964 BCKDHAP12694 445 aa13.01□□□□□ -0.33
ACTN1-204ENST00000438964 UGT2B15P54855 530 aa13.01□□□□□ -0.33
ACTN1-204ENST00000438964 SPATS1Q496A3 300 aa13.01□□□□□ -0.33
ACTN1-204ENST00000438964 MANEALQ5VSG8 457 aa13.01□□□□□ -0.33
ACTN1-204ENST00000438964 SLC46A3Q7Z3Q1 461 aa13.01□□□□□ -0.33
ACTN1-204ENST00000438964 RAB43Q86YS6 212 aa13.01□□□□□ -0.33
ACTN1-204ENST00000438964 OR7D4Q8NG98 312 aa13.01□□□□□ -0.33
ACTN1-204ENST00000438964 TMEM203Q969S6 136 aa13.01□□□□□ -0.33
ACTN1-204ENST00000438964 GFM1Q96RP9 751 aaKnown RBP13.01□□□□□ -0.33
ACTN1-204ENST00000438964 FEVQ99581 238 aa13.01□□□□□ -0.33
ACTN1-204ENST00000438964 SLC30A2Q9BRI3 323 aa13.01□□□□□ -0.33
ACTN1-204ENST00000438964 LTBP3Q9NS15 1303 aa13.01□□□□□ -0.33
ACTN1-204ENST00000438964 SSC5DA1L4H1 1573 aa13.01□□□□□ -0.33
ACTN1-204ENST00000438964 A0A1W2PQ72 361 aa13.01□□□□□ -0.33
ACTN1-204ENST00000438964 LOC730098B7Z3J9 87 aa13.01□□□□□ -0.33
ACTN1-204ENST00000438964 ARHGAP33O14559 1287 aa13.01□□□□□ -0.33
ACTN1-204ENST00000438964 PKMP14618 531 aaKnown RBP13.01□□□□□ -0.33
ACTN1-204ENST00000438964 CYP2A7P20853 494 aa13.01□□□□□ -0.33
ACTN1-204ENST00000438964 RRM2P31350 389 aa13.01□□□□□ -0.33
ACTN1-204ENST00000438964 UQCRC1P31930 480 aa13.01□□□□□ -0.33
ACTN1-204ENST00000438964 RGS6P49758 472 aa13.01□□□□□ -0.33
ACTN1-204ENST00000438964 ZNF45Q02386 682 aa13.01□□□□□ -0.33
ACTN1-204ENST00000438964 GNASQ5JWF2 1037 aa13.01□□□□□ -0.33
ACTN1-204ENST00000438964 OR6J1Q8NGC5 347 aa13.01□□□□□ -0.33
ACTN1-204ENST00000438964 PPTC7Q8NI37 304 aa13.01□□□□□ -0.33
ACTN1-204ENST00000438964 GTPBP3Q969Y2 492 aaKnown RBP13.01□□□□□ -0.33
ACTN1-204ENST00000438964 TSPAN18Q96SJ8 248 aa13.01□□□□□ -0.33
ACTN1-204ENST00000438964 ZNF382Q96SR6 550 aa13.01□□□□□ -0.33
ACTN1-204ENST00000438964 BOCQ9BWV1 1114 aa13.01□□□□□ -0.33
ACTN1-204ENST00000438964 REEP1Q9H902 201 aa13.01□□□□□ -0.33
ACTN1-204ENST00000438964 AASDHPPTQ9NRN7 309 aa13.01□□□□□ -0.33
ACTN1-204ENST00000438964 PCDH10Q9P2E7 1040 aa13.01□□□□□ -0.33
ACTN1-204ENST00000438964 LYVE1Q9Y5Y7 322 aa13.01□□□□□ -0.33
ACTN1-204ENST00000438964 FAM227AF5H4B4 570 aa13□□□□□ -0.33
ACTN1-204ENST00000438964 SMIM10L2AP0DMW4 78 aa13□□□□□ -0.33
ACTN1-204ENST00000438964 SMIM10L2BP0DMW5 78 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms